CF834180
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834180 vs. ExPASy Swiss-Prot
Match: MSRA_CLAMS (Peptide methionine sulfoxide reductase msrA OS=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) GN=msrA PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.518e-13 Identity = 37/86 (43.02%), Postives = 54/86 (62.79%), Query Frame = -2 Query: 354 DTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVLNRKIVTEILPAKKFYRAEEYHQQYLAKGGRFGF 611 D +LD+F+ HDP LNRQG DVGTQYRS ++ EQE+ ++++ R +L+ VT I P ++ AE+YHQ + AK G+ Sbjct: 67 DVILDVFFTLHDPRQLNRQGADVGTQYRSAMFPADAEQEQLFRDAIARAGDLLDGTPVTTIEPLGTWHDAEDYHQDFFAKNPGQGY 152
BLAST of CF834180 vs. ExPASy Swiss-Prot
Match: MSRA_PSYA2 (Peptide methionine sulfoxide reductase msrA OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=msrA PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.288e-13 Identity = 35/77 (45.45%), Postives = 53/77 (68.83%), Query Frame = -2 Query: 381 DTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVLNRKIVTEILPAKKFYRAEEYHQQY 611 + +LD+F+A HDPT ++RQ NDVG+QYRS + FYT E +K + + + + IVTE+ PA +FY+AE+ HQ + Sbjct: 67 EVILDVFFATHDPTTMDRQANDVGSQYRS-VVFYTDETQKPTVDRTINKLRDMGINIVTEVHPAVEFYQAEDTHQDF 142
BLAST of CF834180 vs. ExPASy Swiss-Prot
Match: MSRA_PELUB (Peptide methionine sulfoxide reductase msrA OS=Pelagibacter ubique GN=msrA PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.288e-13 Identity = 36/86 (41.86%), Postives = 55/86 (63.95%), Query Frame = -2 Query: 372 PKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVLNRKIVTEILPAKKFYRAEEYHQQYLAK 629 PK S++ +L+ F+ HDPT LN QG D GTQYRS I++ + Q++ A+ +++ L+ +VT+ K + AEEYHQ+YL K Sbjct: 61 PKIISYEKILNFFFEIHDPTTLNSQGPDFGTQYRSEIFYLSDRQKEIAESVIKKVNLKLSGNVVTKSSLLKNYCPAEEYHQRYLEK 146
BLAST of CF834180 vs. ExPASy Swiss-Prot
Match: MSRA_NOCFA (Peptide methionine sulfoxide reductase msrA OS=Nocardia farcinica GN=msrA PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.288e-13 Identity = 35/88 (39.77%), Postives = 54/88 (61.36%), Query Frame = -2 Query: 372 PKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLE--RQQKVLNRKIVTEILPAKKFYRAEEYHQQYLAK 629 P+ + LL+ F+ HDPT +RQGND+GT YRS I++ EQ + A++++ + K+VTE+ PA +F+ AE HQ YL + Sbjct: 60 PERTDYRALLEFFFQIHDPTTKDRQGNDIGTSYRSAIFYLDDEQRRVAEDTIADVDASGLWPGKVVTEVTPASEFWEAEPEHQDYLLR 147
BLAST of CF834180 vs. ExPASy Swiss-Prot
Match: MSRA_CLAM3 (Peptide methionine sulfoxide reductase msrA OS=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) GN=msrA PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.288e-13 Identity = 36/86 (41.86%), Postives = 53/86 (61.63%), Query Frame = -2 Query: 354 DTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVLNRKIVTEILPAKKFYRAEEYHQQYLAKGGRFGF 611 D +LD+F+ HDP LNRQG DVGTQYRS ++ QE+ ++++ R ++ + VT I P +Y AE+YHQ + AK G+ Sbjct: 67 DVILDVFFTLHDPRQLNRQGADVGTQYRSAMFPADAAQEQLFRDAISRAGELWDGTAVTTIEPVGTWYDAEDYHQDFFAKNPGQGY 152
BLAST of CF834180 vs. ExPASy Swiss-Prot
Match: MSRA_YEAST (Peptide methionine sulfoxide reductase OS=Saccharomyces cerevisiae GN=MXR1 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.294e-13 Identity = 40/86 (46.51%), Postives = 47/86 (54.65%), Query Frame = -2 Query: 372 PKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVLNRKIVTEILPAKKFYRAEEYHQQYLAK 629 PK + L D F+ HDPT N QG D GTQYRSG++ ++ K + E Q KI T I P K FY AEEYHQ YL K Sbjct: 84 PKVITLRELTDFFFRIHDPTTSNSQGPDKGTQYRSGLFAHSDADLKELAKIKEEWQPKWGNKIATVIEPIKNFYDAEEYHQLYLDK 169
BLAST of CF834180 vs. ExPASy Swiss-Prot
Match: MSRA_MYCSJ (Peptide methionine sulfoxide reductase msrA OS=Mycobacterium sp. (strain JLS) GN=msrA PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.294e-13 Identity = 36/88 (40.91%), Postives = 54/88 (61.36%), Query Frame = -2 Query: 372 PKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLE--RQQKVLNRKIVTEILPAKKFYRAEEYHQQYLAK 629 P + + LL+ F+ HDPT NRQGNDVGT YRS I++ +Q++ A +++ + K+VTE+ PA +F+ AE HQ YL + Sbjct: 60 PAQTDYRALLEFFFQIHDPTTKNRQGNDVGTSYRSAIFYVDDDQKRVALDTIADVDASGLWPGKVVTEVTPAGEFWEAEPEHQDYLER 147
BLAST of CF834180 vs. ExPASy Swiss-Prot
Match: MSRA_RUTMC (Peptide methionine sulfoxide reductase msrA OS=Ruthia magnifica subsp. Calyptogena magnifica GN=msrA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 7.325e-13 Identity = 37/79 (46.84%), Postives = 52/79 (65.82%), Query Frame = -2 Query: 381 SFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVLNRKIVTEILPAKKFYRAEEYHQQY 617 SF TLL++F+ H+PT N+QGND GTQYRS I++ EQ+ A + + + ++ KIVT+I+ FY AE YHQ Y Sbjct: 65 SFKTLLNIFFEIHNPTTKNQQGNDRGTQYRSAIFYTNDEQQSQAIDMVNQ----MSDKIVTQIIKLDVFYPAENYHQNY 139
BLAST of CF834180 vs. ExPASy Swiss-Prot
Match: MSRA_MYCVP (Peptide methionine sulfoxide reductase msrA OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=msrA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.249e-12 Identity = 36/88 (40.91%), Postives = 53/88 (60.23%), Query Frame = -2 Query: 372 PKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLE--RQQKVLNRKIVTEILPAKKFYRAEEYHQQYLAK 629 P + + LL+ F+ HDPT NRQGNDVGT YRS I++ EQ + A +++ + K+VT++ PA +F+ AE HQ YL + Sbjct: 60 PAQTDYRALLEFFFQIHDPTTKNRQGNDVGTSYRSEIFYVDDEQRRIALDTIADVDASGLWPGKVVTDVSPAPEFWEAEPEHQDYLER 147
BLAST of CF834180 vs. ExPASy Swiss-Prot
Match: MSRA_PICTO (Peptide methionine sulfoxide reductase msrA OS=Picrophilus torridus GN=msrA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.632e-12 Identity = 38/95 (40.00%), Postives = 58/95 (61.05%), Query Frame = -2 Query: 354 PKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAK---ESLERQQKVLNRKIVTEILPAKKFYRAEEYHQQYLAKGGRFGF 629 P++ SFD +L+++++ DPT LNRQG DVGT YR+ I++ Q++ A ++LE K KIV + P K FY AE+YH+ Y + G+ Sbjct: 62 PEKISFDDILEIYFSVIDPTTLNRQGEDVGTNYRTAIFYINEYQKERAVNYIKNLEASGKY--SKIVVSVEPYKNFYPAEDYHKNYFERHPEQGY 154 The following BLAST results are available for this feature:
BLAST of CF834180 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 248
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834180 ID=CF834180; Name=CF834180; organism=Citrus sinensis; type=EST; length=630bpback to top |