CF834181

Overview
NameCF834181
Unique NameCF834181
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length639
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2698 contig Csv1_Contig2698:565..1204. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834181 vs. ExPASy Swiss-Prot
Match: MSRA_RHORT (Peptide methionine sulfoxide reductase msrA OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=msrA PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.496e-32
Identity = 66/129 (51.16%), Postives = 87/129 (67.44%), Query Frame = 2
Query:    5 RVPGVTKTEVGYT*GYLHNPSYEDVCSGTTNHNEVVRLQYDPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLER--QQKVLNRKIVTEILPAKKFYRAEEYHQQYLAK 385
            ++PGVT T VGYT G+   P+Y  VC+G T H E VR+ YDP + +++ LLD+FWA HDPT ++RQG D+G QYRS I+++   QE AA  S  R  Q   L+R I T I PA  F+ AEEYHQ+Y+ K
Sbjct:   20 KIPGVTGTTVGYTGGHFKEPTYRQVCAGDTGHAEAVRVDYDPDKVTYEQLLDVFWAAHDPTQVDRQGPDIGDQYRSAIFYHDAGQEAAAGASRARLEQSGALSRAIATRIEPAGPFWPAEEYHQRYIDK 148          
BLAST of CF834181 vs. ExPASy Swiss-Prot
Match: MSRA_ESCF3 (Peptide methionine sulfoxide reductase msrA OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=msrA PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.261e-32
Identity = 70/132 (53.03%), Postives = 84/132 (63.64%), Query Frame = 2
Query:    5 RVPGVTKTEVGYT*GYLHNPSYEDVCSGTTNHNEVVRLQYDPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVL-----NRKIVTEILPAKKFYRAEEYHQQYLAK 385
            ++PGV  T  GYT GY  NP+Y +VCSG T H E VR+ YDP   S++ LL +FW  HDP    RQGND GTQYRS IY  TPEQ+ AA+ S ER Q  +     +R + TEI  A  FY AE+ HQQYL K
Sbjct:   62 QLPGVYSTAAGYTGGYTPNPTYREVCSGETGHAEAVRIVYDPSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDSAARASRERFQAAMIAANDDRPVTTEIANATPFYYAEDDHQQYLHK 193          
BLAST of CF834181 vs. ExPASy Swiss-Prot
Match: MSRA_ECOL6 (Peptide methionine sulfoxide reductase msrA OS=Escherichia coli O6 GN=msrA PE=3 SV=3)

HSP 1 Score: 138.272 bits (347), Expect = 3.261e-32
Identity = 71/132 (53.79%), Postives = 85/132 (64.39%), Query Frame = 2
Query:    5 RVPGVTKTEVGYT*GYLHNPSYEDVCSGTTNHNEVVRLQYDPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVL-----NRKIVTEILPAKKFYRAEEYHQQYLAK 385
            ++PGV  T   YT GY  NP+Y +VCSG T H E VR+ YDP   S++ LL +FW  HDP    RQGND GTQYRS IY  TPEQ+ AA+ SLER Q  +     +R+I TEI  A  FY AE+ HQQYL K
Sbjct:   62 QLPGVYSTAAVYTGGYTPNPTYREVCSGDTGHAEAVRIVYDPSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAMLAADDDRRITTEIANATPFYYAEDDHQQYLHK 193          
BLAST of CF834181 vs. ExPASy Swiss-Prot
Match: MSRA_ECO27 (Peptide methionine sulfoxide reductase msrA OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=msrA PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.261e-32
Identity = 71/129 (55.04%), Postives = 83/129 (64.34%), Query Frame = 2
Query:   14 GVTKTEVGYT*GYLHNPSYEDVCSGTTNHNEVVRLQYDPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVL-----NRKIVTEILPAKKFYRAEEYHQQYLAK 385
            GV  T  GYT GY  NP+Y +VCSG T H E VR+ YDP   S++ LL +FW  HDP    RQGND GTQYRS IY  TPEQ+ AA+ SLER Q  +     +R+I TEI  A  FY AE+ HQQYL K
Sbjct:   65 GVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYDPSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAMLAADDDRRITTEIANATPFYYAEDDHQQYLHK 193          
BLAST of CF834181 vs. ExPASy Swiss-Prot
Match: MSRA_ERWCT (Peptide methionine sulfoxide reductase msrA OS=Erwinia carotovora subsp. atroseptica GN=msrA PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 4.258e-32
Identity = 69/130 (53.08%), Postives = 84/130 (64.62%), Query Frame = 2
Query:   11 PGVTKTEVGYT*GYLHNPSYEDVCSGTTNHNEVVRLQYDPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVL-----NRKIVTEILPAKKFYRAEEYHQQYLAK 385
            PG+  T  GY  GY  NP+Y +VCSG T+H E VR+ +DP   S+  LL +FW  HDP    RQG D+G+QYRS IY  TPEQE+AA+ SL+R Q+ +      R I TEI PA  FY AEE HQQYL K
Sbjct:   64 PGIYSTAAGYIGGYTPNPTYREVCSGQTDHAEAVRVVFDPATISYSQLLQLFWENHDPAQGMRQGGDIGSQYRSAIYTLTPEQEQAAQASLQRFQQAMRENSDGRAISTEIEPAGPFYYAEEDHQQYLHK 193          
BLAST of CF834181 vs. ExPASy Swiss-Prot
Match: MSRA1_CAUCR (Peptide methionine sulfoxide reductase msrA 1 OS=Caulobacter crescentus GN=msrA1 PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 4.258e-32
Identity = 69/131 (52.67%), Postives = 85/131 (64.89%), Query Frame = 2
Query:    5 RVPGVTKTEVGYT*GYLHNPSYEDVCSGTTNHNEVVRLQYDPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVLNRK----IVTEILPAKKFYRAEEYHQQYLAK 385
            +VPGV  T  GY  G   NP+YE+VC+G T H EVV + +DPK  +++ LL  FW  HDPT   RQGND+GTQYRSG+Y  +  Q  AA ES    Q+ L+ +    I TEI PA  FY AE+YHQQYLAK
Sbjct:   64 KVPGVYVTAAGYAAGITPNPTYEEVCTGRTGHTEVVLVVFDPKVVTYEALLKTFWENHDPTQGMRQGNDIGTQYRSGLYVTSDAQAAAAAESKAAYQQALSARGLGTITTEIAPAGPFYFAEDYHQQYLAK 194          
BLAST of CF834181 vs. ExPASy Swiss-Prot
Match: MSRA_SERP5 (Peptide methionine sulfoxide reductase msrA OS=Serratia proteamaculans (strain 568) GN=msrA PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 5.562e-32
Identity = 69/129 (53.49%), Postives = 83/129 (64.34%), Query Frame = 2
Query:   14 GVTKTEVGYT*GYLHNPSYEDVCSGTTNHNEVVRLQYDPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVL-----NRKIVTEILPAKKFYRAEEYHQQYLAK 385
            GV  T  GY+ GY  NP+Y +VCSG T H EVVR+ +DPK  S+  LL +FW  HDP    RQG DVGTQYRS IY  TPEQ+  A+ SL+R Q+ +      R I TE+ PA  FY AE+ HQQYL K
Sbjct:   66 GVYSTAAGYSGGYTPNPTYREVCSGQTGHTEVVRVVFDPKIISYKQLLQVFWENHDPAQGMRQGGDVGTQYRSAIYTLTPEQQTEAESSLQRFQQAMEQAGDKRAITTEVAPALPFYYAEDDHQQYLYK 194          
BLAST of CF834181 vs. ExPASy Swiss-Prot
Match: MSRA_ECO5E (Peptide methionine sulfoxide reductase msrA OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=msrA PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 7.264e-32
Identity = 71/129 (55.04%), Postives = 82/129 (63.57%), Query Frame = 2
Query:   14 GVTKTEVGYT*GYLHNPSYEDVCSGTTNHNEVVRLQYDPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVL-----NRKIVTEILPAKKFYRAEEYHQQYLAK 385
            GV  T  GYT GY  NP+Y +VCSG T H E VR+ YDP   S++ LL +FW  HDP    RQGND GTQYRS IY  TPEQ+ AA+ SLER Q  +     +R I TEI  A  FY AE+ HQQYL K
Sbjct:   65 GVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYDPSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAMLAADDDRHITTEIANATPFYYAEDDHQQYLHK 193          
BLAST of CF834181 vs. ExPASy Swiss-Prot
Match: MSRA_ECO57 (Peptide methionine sulfoxide reductase msrA OS=Escherichia coli O157:H7 GN=msrA PE=3 SV=3)

HSP 1 Score: 137.117 bits (344), Expect = 7.264e-32
Identity = 71/129 (55.04%), Postives = 82/129 (63.57%), Query Frame = 2
Query:   14 GVTKTEVGYT*GYLHNPSYEDVCSGTTNHNEVVRLQYDPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVL-----NRKIVTEILPAKKFYRAEEYHQQYLAK 385
            GV  T  GYT GY  NP+Y +VCSG T H E VR+ YDP   S++ LL +FW  HDP    RQGND GTQYRS IY  TPEQ+ AA+ SLER Q  +     +R I TEI  A  FY AE+ HQQYL K
Sbjct:   65 GVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYDPSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAMLAADDDRHITTEIANATPFYYAEDDHQQYLHK 193          
BLAST of CF834181 vs. ExPASy Swiss-Prot
Match: MSRA_METAC (Peptide methionine sulfoxide reductase msrA OS=Methanosarcina acetivorans GN=msrA PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.618e-31
Identity = 68/131 (51.91%), Postives = 85/131 (64.89%), Query Frame = 2
Query:    5 RVPGVTKTEVGYT*GYLHNPSYEDVCSGTTNHNEVVRLQYDPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQK--VLNRKIVTEILPAKKFYRAEEYHQQYLAKGG 391
            +V GV  T VGY+ G+   P+YE VC+  T H E VR+ +DPK  S+  LLD+FW  HDPT  NRQG DVG QYRS I+++  EQ+ AA  S E  +K  V    IVTEI+P  +FY AE+YHQQY  K G
Sbjct:   47 QVKGVVATAVGYSGGHFEKPTYEQVCTLDTGHAEAVRVIFDPKVVSYKNLLDVFWKIHDPTTKNRQGPDVGKQYRSVIFYHNEEQKAAALASKEELEKAGVFKNPIVTEIVPVSEFYMAEDYHQQYFEKKG 177          
The following BLAST results are available for this feature:
BLAST of CF834181 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 315
Match NameE-valueIdentityDescription
MSRA_RHORT2.496e-3251.16Peptide methionine sulfoxide reductase msrA OS=Rho... [more]
MSRA_ESCF33.261e-3253.03Peptide methionine sulfoxide reductase msrA OS=Esc... [more]
MSRA_ECOL63.261e-3253.79Peptide methionine sulfoxide reductase msrA OS=Esc... [more]
MSRA_ECO273.261e-3255.04Peptide methionine sulfoxide reductase msrA OS=Esc... [more]
MSRA_ERWCT4.258e-3253.08Peptide methionine sulfoxide reductase msrA OS=Erw... [more]
MSRA1_CAUCR4.258e-3252.67Peptide methionine sulfoxide reductase msrA 1 OS=C... [more]
MSRA_SERP55.562e-3253.49Peptide methionine sulfoxide reductase msrA OS=Ser... [more]
MSRA_ECO5E7.264e-3255.04Peptide methionine sulfoxide reductase msrA OS=Esc... [more]
MSRA_ECO577.264e-3255.04Peptide methionine sulfoxide reductase msrA OS=Esc... [more]
MSRA_METAC1.618e-3151.91Peptide methionine sulfoxide reductase msrA OS=Met... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05B06_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834181 ID=CF834181; Name=CF834181; organism=Citrus sinensis; type=EST; length=639bp
CGTTAGAGTGCCAGGTGTCACCAAGACCGAAGTTGGGTACACCTAAGGCT
ACTTGCATAACCCTAGCTACGAGGACGTGTGTAGTGGGACTACCAATCAT
AATGAAGTTGTTAGGCTTCAGTATGATCCTAAGGAGTGTAGTTTCGATAC
TTTGCTTGATATGTTTTGGGCTCGCCATGATCCTACCATGCTTAATCGGC
AGGGTAATGATGTTGGAACACAGTACAGATCTGGAATTTATTTTTACACT
CCTGAGCAAGAGAAGGCAGCCAAGGAGTCCTTGGAGAGACAGCAGAAGGT
CTTGAACAGGAAAATTGTCACCGAAATCCTACCTGCCAAGAAGTTCTACC
GAGCTGAGGAATACCACCAGCAGTATCTTGCAAAAGGGGGTCGATTTGGA
TTCAAACAATCTACTGAGAAAGGCTGCAATGATCCTATCAGGTGCTATGG
CTAAATAGTACCCTGCTATTACAGTTAATTTTCAGCTTTTTTCTGAATCT
TAGCCATTATAACTTGTGTTCTTGCTATGATAAGAATGCCAGATGTATTT
AGTGTCTGAACTTGGGTATGTAACTAGTCATAGTCTCTTAAACCATCATC
TATATCTGTAATTTCACTGGTCATGTTTTTTAATGTTTA
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