CF834181

Overview
NameCF834181
Unique NameCF834181
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length639
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2698 contig Csv1_Contig2698:565..1204. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF834181 vs. ExPASy Swiss-Prot
Match: MSRA_YERPY (Peptide methionine sulfoxide reductase msrA OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=msrA PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.052e-30
Identity = 68/130 (52.31%), Postives = 82/130 (63.08%), Query Frame = 2 
Query:   11 PGVTKTEVGYT*GYLHNPSYEDVCSGTTNHNEVVRLQYDPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVL-----NRKIVTEILPAKKFYRAEEYHQQYLAK 385
            PGV  T  GY+ G+  NP+Y +VCSG T H EVVR+ +DP   S+  LL +FW  HDP    RQG DVGTQYRS IY  TPEQE+ A +S ER Q+ +      R I +EI  A  FY AE+ HQQYL K
Sbjct:   64 PGVYSTAAGYSGGHTPNPTYHEVCSGRTGHAEVVRVVFDPAVISYQQLLQIFWENHDPAQGMRQGGDVGTQYRSAIYVLTPEQEEQAHKSRERFQQAMEKAGDQRVITSEITVALPFYYAEDDHQQYLHK 193
[Close]
BLAST of CF834181 vs. ExPASy Swiss-Prot
Match: MSRA_YERPS (Peptide methionine sulfoxide reductase msrA OS=Yersinia pseudotuberculosis GN=msrA PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.052e-30
Identity = 68/130 (52.31%), Postives = 82/130 (63.08%), Query Frame = 2 
Query:   11 PGVTKTEVGYT*GYLHNPSYEDVCSGTTNHNEVVRLQYDPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVL-----NRKIVTEILPAKKFYRAEEYHQQYLAK 385
            PGV  T  GY+ G+  NP+Y +VCSG T H EVVR+ +DP   S+  LL +FW  HDP    RQG DVGTQYRS IY  TPEQE+ A +S ER Q+ +      R I +EI  A  FY AE+ HQQYL K
Sbjct:   64 PGVYSTAAGYSGGHTPNPTYHEVCSGRTGHAEVVRVVFDPAVISYQQLLQIFWENHDPAQGMRQGGDVGTQYRSAIYVLTPEQEEQAHKSRERFQQAMEKAGDQRVITSEITVALPFYYAEDDHQQYLHK 193
[Close]
BLAST of CF834181 vs. ExPASy Swiss-Prot
Match: MSRA_YERPP (Peptide methionine sulfoxide reductase msrA OS=Yersinia pestis (strain Pestoides F) GN=msrA PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.052e-30
Identity = 68/130 (52.31%), Postives = 82/130 (63.08%), Query Frame = 2 
Query:   11 PGVTKTEVGYT*GYLHNPSYEDVCSGTTNHNEVVRLQYDPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVL-----NRKIVTEILPAKKFYRAEEYHQQYLAK 385
            PGV  T  GY+ G+  NP+Y +VCSG T H EVVR+ +DP   S+  LL +FW  HDP    RQG DVGTQYRS IY  TPEQE+ A +S ER Q+ +      R I +EI  A  FY AE+ HQQYL K
Sbjct:   64 PGVYSTAAGYSGGHTPNPTYHEVCSGRTGHAEVVRVVFDPAVISYQQLLQIFWENHDPAQGMRQGGDVGTQYRSAIYVLTPEQEEQAHKSRERFQQAMEKAGDQRVITSEITVALPFYYAEDDHQQYLHK 193
[Close]
BLAST of CF834181 vs. ExPASy Swiss-Prot
Match: MSRA_YERPN (Peptide methionine sulfoxide reductase msrA OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=msrA PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.052e-30
Identity = 68/130 (52.31%), Postives = 82/130 (63.08%), Query Frame = 2 
Query:   11 PGVTKTEVGYT*GYLHNPSYEDVCSGTTNHNEVVRLQYDPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVL-----NRKIVTEILPAKKFYRAEEYHQQYLAK 385
            PGV  T  GY+ G+  NP+Y +VCSG T H EVVR+ +DP   S+  LL +FW  HDP    RQG DVGTQYRS IY  TPEQE+ A +S ER Q+ +      R I +EI  A  FY AE+ HQQYL K
Sbjct:   64 PGVYSTAAGYSGGHTPNPTYHEVCSGRTGHAEVVRVVFDPAVISYQQLLQIFWENHDPAQGMRQGGDVGTQYRSAIYVLTPEQEEQAHKSRERFQQAMEKAGDQRVITSEITVALPFYYAEDDHQQYLHK 193
[Close]
BLAST of CF834181 vs. ExPASy Swiss-Prot
Match: MSRA_YERPG (Peptide methionine sulfoxide reductase msrA OS=Yersinia pestis bv. Antiqua (strain Angola) GN=msrA PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.052e-30
Identity = 68/130 (52.31%), Postives = 82/130 (63.08%), Query Frame = 2 
Query:   11 PGVTKTEVGYT*GYLHNPSYEDVCSGTTNHNEVVRLQYDPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVL-----NRKIVTEILPAKKFYRAEEYHQQYLAK 385
            PGV  T  GY+ G+  NP+Y +VCSG T H EVVR+ +DP   S+  LL +FW  HDP    RQG DVGTQYRS IY  TPEQE+ A +S ER Q+ +      R I +EI  A  FY AE+ HQQYL K
Sbjct:   64 PGVYSTAAGYSGGHTPNPTYHEVCSGRTGHAEVVRVVFDPAVISYQQLLQIFWENHDPAQGMRQGGDVGTQYRSAIYVLTPEQEEQAHKSRERFQQAMEKAGDQRVITSEITVALPFYYAEDDHQQYLHK 193
[Close]
BLAST of CF834181 vs. ExPASy Swiss-Prot
Match: MSRA_YERPE (Peptide methionine sulfoxide reductase msrA OS=Yersinia pestis GN=msrA PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.052e-30
Identity = 68/130 (52.31%), Postives = 82/130 (63.08%), Query Frame = 2 
Query:   11 PGVTKTEVGYT*GYLHNPSYEDVCSGTTNHNEVVRLQYDPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVL-----NRKIVTEILPAKKFYRAEEYHQQYLAK 385
            PGV  T  GY+ G+  NP+Y +VCSG T H EVVR+ +DP   S+  LL +FW  HDP    RQG DVGTQYRS IY  TPEQE+ A +S ER Q+ +      R I +EI  A  FY AE+ HQQYL K
Sbjct:   64 PGVYSTAAGYSGGHTPNPTYHEVCSGRTGHAEVVRVVFDPAVISYQQLLQIFWENHDPAQGMRQGGDVGTQYRSAIYVLTPEQEEQAHKSRERFQQAMEKAGDQRVITSEITVALPFYYAEDDHQQYLHK 193
[Close]
BLAST of CF834181 vs. ExPASy Swiss-Prot
Match: MSRA_YERPB (Peptide methionine sulfoxide reductase msrA OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=msrA PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.052e-30
Identity = 68/130 (52.31%), Postives = 82/130 (63.08%), Query Frame = 2 
Query:   11 PGVTKTEVGYT*GYLHNPSYEDVCSGTTNHNEVVRLQYDPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVL-----NRKIVTEILPAKKFYRAEEYHQQYLAK 385
            PGV  T  GY+ G+  NP+Y +VCSG T H EVVR+ +DP   S+  LL +FW  HDP    RQG DVGTQYRS IY  TPEQE+ A +S ER Q+ +      R I +EI  A  FY AE+ HQQYL K
Sbjct:   64 PGVYSTAAGYSGGHTPNPTYHEVCSGRTGHAEVVRVVFDPAVISYQQLLQIFWENHDPAQGMRQGGDVGTQYRSAIYVLTPEQEEQAHKSRERFQQAMEKAGDQRVITSEITVALPFYYAEDDHQQYLHK 193
[Close]
BLAST of CF834181 vs. ExPASy Swiss-Prot
Match: MSRA_YERPA (Peptide methionine sulfoxide reductase msrA OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=msrA PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.052e-30
Identity = 68/130 (52.31%), Postives = 82/130 (63.08%), Query Frame = 2 
Query:   11 PGVTKTEVGYT*GYLHNPSYEDVCSGTTNHNEVVRLQYDPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVL-----NRKIVTEILPAKKFYRAEEYHQQYLAK 385
            PGV  T  GY+ G+  NP+Y +VCSG T H EVVR+ +DP   S+  LL +FW  HDP    RQG DVGTQYRS IY  TPEQE+ A +S ER Q+ +      R I +EI  A  FY AE+ HQQYL K
Sbjct:   64 PGVYSTAAGYSGGHTPNPTYHEVCSGRTGHAEVVRVVFDPAVISYQQLLQIFWENHDPAQGMRQGGDVGTQYRSAIYVLTPEQEEQAHKSRERFQQAMEKAGDQRVITSEITVALPFYYAEDDHQQYLHK 193
[Close]
BLAST of CF834181 vs. ExPASy Swiss-Prot
Match: MSRA_YERP3 (Peptide methionine sulfoxide reductase msrA OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=msrA PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.052e-30
Identity = 68/130 (52.31%), Postives = 82/130 (63.08%), Query Frame = 2 
Query:   11 PGVTKTEVGYT*GYLHNPSYEDVCSGTTNHNEVVRLQYDPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVL-----NRKIVTEILPAKKFYRAEEYHQQYLAK 385
            PGV  T  GY+ G+  NP+Y +VCSG T H EVVR+ +DP   S+  LL +FW  HDP    RQG DVGTQYRS IY  TPEQE+ A +S ER Q+ +      R I +EI  A  FY AE+ HQQYL K
Sbjct:   64 PGVYSTAAGYSGGHTPNPTYHEVCSGRTGHAEVVRVVFDPAVISYQQLLQIFWENHDPAQGMRQGGDVGTQYRSAIYVLTPEQEEQAHKSRERFQQAMEKAGDQRVITSEITVALPFYYAEDDHQQYLHK 193
[Close]
BLAST of CF834181 vs. ExPASy Swiss-Prot
Match: MSRA_SCHPO (Probable peptide methionine sulfoxide reductase OS=Schizosaccharomyces pombe GN=SPAC29E6.05c PE=2 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 3.052e-30
Identity = 62/125 (49.60%), Postives = 87/125 (69.60%), Query Frame = 2 
Query:   17 VTKTEVGYT*GYLHNPSYEDVCSGTTNHNEVVRLQYDPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQ--KVLNRKIVTEILPAKKFYRAEEYHQQYLAK 385
            + KT VGYT G   +P+Y++VC+ TTNH E +++++D K  S+D +++ F+A HDPT  N+QGND+GTQYRS I+   PEQ   AK  +   Q     N+KIVT+ILPA K++ AE+YHQ YL K
Sbjct:   28 ILKTSVGYTGGITADPTYKEVCTNTTNHAEALKIEFDEKLTSYDKIIEFFFAMHDPTTSNQQGNDIGTQYRSAIFTTNPEQATIAKRVMNEVQAKHYPNKKIVTQILPAGKWWDAEDYHQLYLEK 152
The following BLAST results are available for this feature:
BLAST of CF834181 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 315
Match NameE-valueIdentityDescription
MSRA_YERPY3.052e-3052.31Peptide methionine sulfoxide reductase msrA OS=Yer... [more]
MSRA_YERPS3.052e-3052.31Peptide methionine sulfoxide reductase msrA OS=Yer... [more]
MSRA_YERPP3.052e-3052.31Peptide methionine sulfoxide reductase msrA OS=Yer... [more]
MSRA_YERPN3.052e-3052.31Peptide methionine sulfoxide reductase msrA OS=Yer... [more]
MSRA_YERPG3.052e-3052.31Peptide methionine sulfoxide reductase msrA OS=Yer... [more]
MSRA_YERPE3.052e-3052.31Peptide methionine sulfoxide reductase msrA OS=Yer... [more]
MSRA_YERPB3.052e-3052.31Peptide methionine sulfoxide reductase msrA OS=Yer... [more]
MSRA_YERPA3.052e-3052.31Peptide methionine sulfoxide reductase msrA OS=Yer... [more]
MSRA_YERP33.052e-3052.31Peptide methionine sulfoxide reductase msrA OS=Yer... [more]
MSRA_SCHPO3.052e-3049.60Probable peptide methionine sulfoxide reductase OS... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05B06_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834181 ID=CF834181; Name=CF834181; organism=Citrus sinensis; type=EST; length=639bp
CGTTAGAGTGCCAGGTGTCACCAAGACCGAAGTTGGGTACACCTAAGGCT
ACTTGCATAACCCTAGCTACGAGGACGTGTGTAGTGGGACTACCAATCAT
AATGAAGTTGTTAGGCTTCAGTATGATCCTAAGGAGTGTAGTTTCGATAC
TTTGCTTGATATGTTTTGGGCTCGCCATGATCCTACCATGCTTAATCGGC
AGGGTAATGATGTTGGAACACAGTACAGATCTGGAATTTATTTTTACACT
CCTGAGCAAGAGAAGGCAGCCAAGGAGTCCTTGGAGAGACAGCAGAAGGT
CTTGAACAGGAAAATTGTCACCGAAATCCTACCTGCCAAGAAGTTCTACC
GAGCTGAGGAATACCACCAGCAGTATCTTGCAAAAGGGGGTCGATTTGGA
TTCAAACAATCTACTGAGAAAGGCTGCAATGATCCTATCAGGTGCTATGG
CTAAATAGTACCCTGCTATTACAGTTAATTTTCAGCTTTTTTCTGAATCT
TAGCCATTATAACTTGTGTTCTTGCTATGATAAGAATGCCAGATGTATTT
AGTGTCTGAACTTGGGTATGTAACTAGTCATAGTCTCTTAAACCATCATC
TATATCTGTAATTTCACTGGTCATGTTTTTTAATGTTTA
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