CF834186

Overview
NameCF834186
Unique NameCF834186
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length681
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6751 contig Csv1_Contig6751:512..1192. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834186 vs. ExPASy Swiss-Prot
Match: ILVG_ECOLI (Acetolactate synthase isozyme 2 large subunit OS=Escherichia coli (strain K12) GN=ilvG PE=1 SV=3)

HSP 1 Score: 148.673 bits (374), Expect = 2.739e-35
Identity = 76/155 (49.03%), Postives = 103/155 (66.45%), Query Frame = -1
Query:  217 SGGLGAMGFGLPAAIGAAVANPDAIIVDIDGDGSFIMNVQELATIKVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLRAAIQTMLDTPGPYLLDVIFPHQEHVLPMIPSGGAFKDVI 681
            S GLG MGFGLPAA+GA VA P+  +V I GDGSF+MNVQEL T+K ++LP+KI+LL+NQ LGMV QW+  F++   + T L D        P+ L  A A GI G  +TRK  + AA+ TML++ GPYLL V     E+V P++P G +  +++
Sbjct:  397 SSGLGTMGFGLPAAVGAQVARPNDTVVCISGDGSFMMNVQELGTVKRKQLPLKIVLLDNQRLGMVRQWQQLFFQERYSETTLTDN-------PDFLMLASAFGIHGQHITRKDQVEAALDTMLNSDGPYLLHVSIDELENVWPLVPPGASNSEML 544          
BLAST of CF834186 vs. ExPASy Swiss-Prot
Match: ILVB_SCHPO (Acetolactate synthase, mitochondrial OS=Schizosaccharomyces pombe GN=ilv1 PE=2 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 3.955e-34
Identity = 72/155 (46.45%), Postives = 99/155 (63.87%), Query Frame = -1
Query:  217 SGGLGAMGFGLPAAIGAAVANPDAIIVDIDGDGSFIMNVQELATIKVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLRAAIQTMLDTPGPYLLDVIFPHQEHVLPMIPSGGAFKDVI 681
            SGGLG MGFGLPAAIGA+VA P  I++DIDGD SF M   ELAT++   +P+KIL+LNN+  GMV QW++ FY+   +HT+  +        PN +K A+A GI   +V ++ DL   ++  L T GP L++V+   +EHV P +P G A    I
Sbjct:  517 SGGLGTMGFGLPAAIGASVAAPKDIVIDIDGDASFSMTGMELATVRQFDIPVKILILNNEEQGMVTQWQNLFYEKRYSHTHQKN--------PNFVKLADAMGIKALRVEKREDLAKKMKEFLSTKGPVLMEVLVAQKEHVYPFVPGGKALHQFI 663          
BLAST of CF834186 vs. ExPASy Swiss-Prot
Match: ILVB_YEAST (Acetolactate synthase catalytic subunit, mitochondrial OS=Saccharomyces cerevisiae GN=ILV2 PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.555e-30
Identity = 66/155 (42.58%), Postives = 98/155 (63.23%), Query Frame = -1
Query:  217 SGGLGAMGFGLPAAIGAAVANPDAIIVDIDGDGSFIMNVQELATIKVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLRAAIQTMLDTPGPYLLDVIFPHQEHVLPMIPSGGAFKDVI 681
            SGGLG MG+GLPAAIGA VA P+++++DIDGD SF M + EL++      P+KIL+LNN+  GMV QW+  FY+   +HT+        ++ P+ +K AEA G+ G +V ++ +L A ++  + T GP LL+V    +  VLPM+  G    + I
Sbjct:  519 SGGLGTMGYGLPAAIGAQVAKPESLVIDIDGDASFNMTLTELSSAVQAGTPVKILILNNEEQGMVTQWQSLFYEHRYSHTH--------QLNPDFIKLAEAMGLKGLRVKKQEELDAKLKEFVSTKGPVLLEVEVDKKVPVLPMVAGGSGLDEFI 665          
BLAST of CF834186 vs. ExPASy Swiss-Prot
Match: ILVB_CYACA (Acetolactate synthase large subunit OS=Cyanidium caldarium GN=ilvB PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.525e-30
Identity = 68/148 (45.95%), Postives = 92/148 (62.16%), Query Frame = -1
Query:  238 SGGLGAMGFGLPAAIGAAVANPDAIIVDIDGDGSFIMNVQELATIKVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLRAAIQTMLDTPGPYLLDVIFPHQEHVLPMIPSG 681
            S GLG MG+GLPAAIGA +ANP+ +I+ I GD SF MN+QEL TI   +L IKI ++NNQ  GMV QW+  FY    AH+ +          P+ ++ A + GI G +VT   DL++ I+ ++ TPGP L+D I    E+  PMI  G
Sbjct:  426 SSGLGTMGYGLPAAIGAKIANPNDLIICITGDASFQMNLQELGTIAQYELDIKIFIINNQWQGMVRQWQQAFYDQRYAHSNMAKGQ------PDFVQLANSYGIRGIRVTTSKDLKSKIERIISTPGPLLIDCIVATSENCYPMIAPG 567          
BLAST of CF834186 vs. ExPASy Swiss-Prot
Match: ILVB_PORYE (Acetolactate synthase large subunit OS=Porphyra yezoensis GN=ilvB PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.008e-29
Identity = 66/148 (44.59%), Postives = 93/148 (62.84%), Query Frame = -1
Query:  238 SGGLGAMGFGLPAAIGAAVANPDAIIVDIDGDGSFIMNVQELATIKVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLRAAIQTMLDTPGPYLLDVIFPHQEHVLPMIPSG 681
            S GLG MG+GLPAAIGA VA+P+ +++ I GD SF MN+QEL TI   +LP+KI+++NN+  GMV QW+  FY    +H      SR +E  P+  K AEA GI    +  + ++++A+Q  +D PGP LLD      E+  PM+  G
Sbjct:  424 SAGLGTMGYGLPAAIGAQVAHPNDVVICISGDSSFQMNMQELGTIAQYQLPVKIIIINNRWQGMVRQWQQAFYGERYSH------SRMTEGAPDFQKLAEAFGIKAFTINNRQNMQSALQVAIDYPGPVLLDCQVTENENCYPMVAPG 565          
BLAST of CF834186 vs. ExPASy Swiss-Prot
Match: ILVB_PORUM (Acetolactate synthase large subunit OS=Porphyra umbilicalis GN=ilvB PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 6.534e-29
Identity = 66/148 (44.59%), Postives = 91/148 (61.49%), Query Frame = -1
Query:  238 SGGLGAMGFGLPAAIGAAVANPDAIIVDIDGDGSFIMNVQELATIKVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLRAAIQTMLDTPGPYLLDVIFPHQEHVLPMIPSG 681
            S GLG MG+GLPAAIGA VA+P+ +++ + GD SF MN+QEL TI   KLPIKI+++NN+  GMV QW+  FY    +H      SR +E  PN  K AEA GI    V  + ++ ++++  +  PGP LLD      E+  PM+  G
Sbjct:  424 SAGLGTMGYGLPAAIGAQVAHPNELVICVSGDSSFQMNMQELGTIAQYKLPIKIVIINNRWQGMVRQWQQAFYGERYSH------SRMTEGAPNFQKLAEAFGIKAFTVNNRQNMESSLKDAMKYPGPVLLDCQVTENENCYPMVAPG 565          
BLAST of CF834186 vs. ExPASy Swiss-Prot
Match: ILVB_PORPU (Acetolactate synthase large subunit OS=Porphyra purpurea GN=ilvB PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 6.534e-29
Identity = 66/148 (44.59%), Postives = 91/148 (61.49%), Query Frame = -1
Query:  238 SGGLGAMGFGLPAAIGAAVANPDAIIVDIDGDGSFIMNVQELATIKVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLRAAIQTMLDTPGPYLLDVIFPHQEHVLPMIPSG 681
            S GLG MG+GLPAAIGA VA+P+ +++ + GD SF MN+QEL TI   KLPIKI+++NN+  GMV QW+  FY    +H      SR +E  PN  K AEA GI    V  + ++ ++++  +  PGP LLD      E+  PM+  G
Sbjct:  424 SAGLGTMGYGLPAAIGAQVAHPNELVICVSGDSSFQMNMQELGTIAQYKLPIKIVIINNRWQGMVRQWQQAFYGERYSH------SRMTEGAPNFQKLAEAFGIKAFTVNNRQNMESSLKDAMKYPGPVLLDCQVTENENCYPMVAPG 565          
BLAST of CF834186 vs. ExPASy Swiss-Prot
Match: ILVB_ECOLI (Acetolactate synthase isozyme 1 large subunit OS=Escherichia coli (strain K12) GN=ilvB PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.235e-28
Identity = 67/158 (42.41%), Postives = 98/158 (62.03%), Query Frame = -1
Query:  211 SGGLGAMGFGLPAAIGAAVANPDAIIVDIDGDGSFIMNVQELATIKVEKLPIKILLLNNQHLGMVMQWEDRFYKAN-RAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLRAAIQTMLDTPGPYLLDVIFPHQEHVLPMIPSGGAFKDVITE 681
            SGGLG MGFGLPAAIGAA+ANPD  ++   GDGS +MN+QE+AT    +L +KI+L+NN+ LG+V Q +  FY+    A TY G          N ++ A   G+    +  +AD +A++Q +++ PGP L+ V    +E V PM+P G A  +++ E
Sbjct:  413 SGGLGTMGFGLPAAIGAALANPDRKVLCFSGDGSLMMNIQEMATASENQLDVKIILMNNEALGLVHQQQSLFYEQGVFAATYPGK--------INFMQIAAGFGLETCDLNNEADPQASLQEIINRPGPALIHVRIDAEEKVYPMVPPGAANTEMVGE 562          
BLAST of CF834186 vs. ExPASy Swiss-Prot
Match: ILVB_METJA (Probable acetolactate synthase large subunit OS=Methanocaldococcus jannaschii GN=ilvB PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.232e-27
Identity = 61/155 (39.35%), Postives = 95/155 (61.29%), Query Frame = -1
Query:  217 SGGLGAMGFGLPAAIGAAVANPDAIIVDIDGDGSFIMNVQELATIKVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLRAAIQTMLDTPGPYLLDVIFPHQEHVLPMIPSGGAFKDVI 681
            SGGLG MGFG PAAIGA VA P A ++ I GDG F+MN QELATI    +P+ I + +N+ LGMV QW++ +Y   ++  +LG+        P+ +K AE+ G+   ++    +++  ++  + +  PYLLD++    E  LPM+P GG   +++
Sbjct:  416 SGGLGTMGFGFPAAIGAKVAKPYANVISITGDGGFLMNSQELATISEYDIPVVICIFDNRTLGMVYQWQNLYYGQRQSEVHLGES-------PDFVKLAESYGVKADRIISPDEIKEKLKEAILSNEPYLLDIVIDPAE-ALPMVPPGGRLTNIV 562          
BLAST of CF834186 vs. ExPASy Swiss-Prot
Match: ILVB_CRYNV (Acetolactate synthase, mitochondrial OS=Cryptococcus neoformans var. grubii GN=ILV2 PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.585e-27
Identity = 66/155 (42.58%), Postives = 93/155 (60.00%), Query Frame = -1
Query:  223 SGGLGAMGFGLPAAIGAAVANPDAIIVDIDGDGSFIMNVQELATIKVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLRAAIQTMLDTPG--PYLLDVIFPHQEHVLPMIPSGGAFKD 681
            SGGLG MGFGLP+AIGA VA P+  ++DIDGD SF M   ELAT     + +K+LL NN+  GMV QW+D FY+   +HT + +        P+ +K +E+ G  G + T+  DL   ++  L+  G  P +L+ +    EHV PMIP+G A  +
Sbjct:  561 SGGLGTMGFGLPSAIGAKVAAPEKYVIDIDGDASFSMTAMELATASQYDIGVKVLLFNNEFQGMVEQWQDLFYENRYSHTRMTN--------PDFVKLSESMGAKGLRCTKLEDLPRMMKEFLEYDGKRPIVLECLV-SSEHVYPMIPAGKALHE 706          
The following BLAST results are available for this feature:
BLAST of CF834186 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
ILVG_ECOLI2.739e-3549.03Acetolactate synthase isozyme 2 large subunit OS=E... [more]
ILVB_SCHPO3.955e-3446.45Acetolactate synthase, mitochondrial OS=Schizosacc... [more]
ILVB_YEAST1.555e-3042.58Acetolactate synthase catalytic subunit, mitochond... [more]
ILVB_CYACA4.525e-3045.95Acetolactate synthase large subunit OS=Cyanidium c... [more]
ILVB_PORYE1.008e-2944.59Acetolactate synthase large subunit OS=Porphyra ye... [more]
ILVB_PORUM6.534e-2944.59Acetolactate synthase large subunit OS=Porphyra um... [more]
ILVB_PORPU6.534e-2944.59Acetolactate synthase large subunit OS=Porphyra pu... [more]
ILVB_ECOLI4.235e-2842.41Acetolactate synthase isozyme 1 large subunit OS=E... [more]
ILVB_METJA1.232e-2739.35Probable acetolactate synthase large subunit OS=Me... [more]
ILVB_CRYNV3.585e-2742.58Acetolactate synthase, mitochondrial OS=Cryptococc... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05B09_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834186 ID=CF834186; Name=CF834186; organism=Citrus sinensis; type=EST; length=681bp
TTTTTTTTTCCTTTTAATAATAACATTGTAACTCATAGAGTTTGTTTGTT
ACACAAACACTAGTTCCATTAAAACTGACACCTGAACTAAAAACACTGCC
ACACACTCATAGGTAAGTTAAGCCTGCAACTCAAAAGGAACATAAATACA
TAGCCAAGAAGGCATCTATGCTGCTTCAGCTTGTCGGTAATACTGTGTTC
TTCCATCACCTTCAGTTATCACATCTTTAAAAGCTCCACCACTGGGGATC
ATAGGCAGGACATGCTCTTGATGAGGAAAGATGACGTCCAAAAGGTATGG
TCCAGGAGTGTCCAACATAGTCTGAATTGCGGCTCTCAGATCTGCCTTCC
TTGTTACTTGTGCTCCAGGTATTCCACAGGCTTCTGCAAACTTCAACATA
TTCGGAAATATTTCAGACTCTCTTGATGGATCTCCCAAATACGTGTGAGC
CCTATTTGCCTTGTAAAACCGATCCTCCCATTGCATCACCATGCCCAAGT
GCTGATTATTCAACAGCAATATCTTGATGGGGAGTTTCTCTACCTTAATA
GTCGCCAACTCCTGGACGTTCATGATGAAACTCCCATCACCATCAATATC
TACAATGATGGCATCAGGATTTGCAACAGCAGCTCCGATTGCAGCAGGCA
ATCCAAAACCCATAGCCCCTAGTCCTCCGGA
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