CF834231
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834231 vs. ExPASy Swiss-Prot
Match: EFG_HELPJ (Elongation factor G OS=Helicobacter pylori J99 GN=fusA PE=3 SV=3) HSP 1 Score: 68.1662 bits (165), Expect = 4.580e-11 Identity = 58/192 (30.21%), Postives = 87/192 (45.31%), Query Frame = 1 Query: 19 GVQYLNEIKDSVVA---------GFQWASKEGALAEENMRGICFEVC-------DVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKG 546 G +++NEI V+ G Q A + G LA + + F+V DV A G A R A P LLEP+ VE++ PE+ +G + LN++RG + R G + N A++P++E FG+S LR+AT G+ FDH+ + P A ++V KRKG Sbjct: 521 GYEFVNEISGGVIPKEYIPAVDKGIQEAMQNGVLAGYPV--VDFKVTLYDGSYHDVDSSEMAFKIAGSMAFKEASRA-------ANPVLLEPMMKVEVEVPEEYMGDVIGDLNRRRGQINSMDDRLGLKIVN--AFVPLVEMFGYSTDLRSATQGRGTYSMEFDHYGEV------PSNIAKEIV---EKRKG 692
BLAST of CF834231 vs. ExPASy Swiss-Prot
Match: EFG_HELPH (Elongation factor G OS=Helicobacter pylori (strain HPAG1) GN=fusA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.580e-11 Identity = 58/192 (30.21%), Postives = 87/192 (45.31%), Query Frame = 1 Query: 19 GVQYLNEIKDSVVA---------GFQWASKEGALAEENMRGICFEVC-------DVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKG 546 G +++NEI V+ G Q A + G LA + + F+V DV A G A R A P LLEP+ VE++ PE+ +G + LN++RG + R G + N A++P++E FG+S LR+AT G+ FDH+ + P A ++V KRKG Sbjct: 521 GYEFVNEISGGVIPKEYIPAVDKGIQEAMQNGVLAGYPV--VDFKVTLYDGSYHDVDSSEMAFKIAGSMAFKEASRA-------ANPVLLEPMMKVEVEVPEEYMGDVIGDLNRRRGQINSMDDRLGLKIVN--AFVPLVEMFGYSTDLRSATQGRGTYSMEFDHYGEV------PSNIAKEIV---EKRKG 692
BLAST of CF834231 vs. ExPASy Swiss-Prot
Match: EFG_HELPG (Elongation factor G OS=Helicobacter pylori (strain G27) GN=fusA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.580e-11 Identity = 58/192 (30.21%), Postives = 87/192 (45.31%), Query Frame = 1 Query: 19 GVQYLNEIKDSVVA---------GFQWASKEGALAEENMRGICFEVC-------DVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKG 546 G +++NEI V+ G Q A + G LA + + F+V DV A G A R A P LLEP+ VE++ PE+ +G + LN++RG + R G + N A++P++E FG+S LR+AT G+ FDH+ + P A ++V KRKG Sbjct: 521 GYEFVNEISGGVIPKEYIPAVDKGIQEAMQNGVLAGYPV--VDFKVTLYDGSYHDVDSSEMAFKIAGSMAFKEASRA-------ANPVLLEPMMKVEVEVPEEYMGDVIGDLNRRRGQINSMDDRLGLKIVN--AFVPLVEMFGYSTDLRSATQGRGTYSMEFDHYGEV------PSNIAKEIV---EKRKG 692
BLAST of CF834231 vs. ExPASy Swiss-Prot
Match: EFG_HELP2 (Elongation factor G OS=Helicobacter pylori (strain P12) GN=fusA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.580e-11 Identity = 58/192 (30.21%), Postives = 87/192 (45.31%), Query Frame = 1 Query: 19 GVQYLNEIKDSVVA---------GFQWASKEGALAEENMRGICFEVC-------DVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKG 546 G +++NEI V+ G Q A + G LA + + F+V DV A G A R A P LLEP+ VE++ PE+ +G + LN++RG + R G + N A++P++E FG+S LR+AT G+ FDH+ + P A ++V KRKG Sbjct: 521 GYEFVNEISGGVIPKEYIPAVDKGIQEAMQNGVLAGYPV--VDFKVTLYDGSYHDVDSSEMAFKIAGSMAFKEASRA-------ANPVLLEPMMKVEVEVPEEYMGDVIGDLNRRRGQINSMDDRLGLKIVN--AFVPLVEMFGYSTDLRSATQGRGTYSMEFDHYGEV------PSNIAKEIV---EKRKG 692
BLAST of CF834231 vs. ExPASy Swiss-Prot
Match: EFG_HELAH (Elongation factor G OS=Helicobacter acinonychis (strain Sheeba) GN=fusA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.580e-11 Identity = 58/192 (30.21%), Postives = 87/192 (45.31%), Query Frame = 1 Query: 19 GVQYLNEIKDSVVA---------GFQWASKEGALAEENMRGICFEVC-------DVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKG 546 G +++NEI V+ G Q A + G LA + + F+V DV A G A R A P LLEP+ VE++ PE+ +G + LN++RG + R G + N A++P++E FG+S LR+AT G+ FDH+ + P A ++V KRKG Sbjct: 521 GYEFVNEISGGVIPKEYIPAVDKGIQEAMQNGVLAGYPV--VDFKVTLYDGSYHDVDSSEMAFKIAGSMAFKEASRA-------ANPVLLEPMMKVEVEVPEEYMGDVIGDLNRRRGQINSMDDRLGLKIVN--AFVPLVEMFGYSTDLRSATQGRGTYSMEFDHYGEV------PSNIAKEIV---EKRKG 692
BLAST of CF834231 vs. ExPASy Swiss-Prot
Match: EFG2_SHESM (Elongation factor G 2 OS=Shewanella sp. (strain MR-4) GN=fusA2 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.982e-11 Identity = 47/165 (28.48%), Postives = 81/165 (49.09%), Query Frame = 1 Query: 49 SVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRK 543 +V GF G +A + + FE+ D HA ++ A+ S AKP+LLEP+ V++ +P+ +G + LN++RG + +++ G +KA +P+ E FG+ GTLR TSG+ F H+ P + A ++V +++RK Sbjct: 537 AVEKGFASMMNTGTIAGFPVLDVEFELTDGAYHAVDSSAIAFEI--AAKAAFRQSIAKAKPQLLEPIMKVDVFSPDDNVGDVIGDLNRRRGMIKDQV--AGVTGVRVKADVPLSEMFGYIGTLRTMTSGRGQFSMEFSHYSPC------PNSVADKVVEQVKERK 691
BLAST of CF834231 vs. ExPASy Swiss-Prot
Match: EFG_TROWT (Elongation factor G OS=Tropheryma whipplei (strain Twist) GN=fusA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.813e-11 Identity = 51/157 (32.48%), Postives = 71/157 (45.22%), Query Frame = 1 Query: 7 DMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLH-----ADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFD 462 D G + E SV AG + A + G LA GI + D H A G Q A R A P LLEP+ VE++ P++ +G + LN +RGH+ G + I+A +P+ E FG+ G LR+ TSG+A FD Sbjct: 534 DTVTGGRIPKEYIPSVDAGIRDAMQVGVLAGYPTVGIKATLVDGAYHDVDSSEMAFRIAGSQAFKEASR-------RADPTLLEPIMSVEVRTPDEYMGDVIGDLNSRRGHIQSMQDSSGIKV--IQARVPLSEMFGYIGDLRSKTSGRAVYSMTFD 681
BLAST of CF834231 vs. ExPASy Swiss-Prot
Match: EFG_TROW8 (Elongation factor G OS=Tropheryma whipplei (strain TW08/27) GN=fusA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.813e-11 Identity = 51/157 (32.48%), Postives = 71/157 (45.22%), Query Frame = 1 Query: 7 DMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLH-----ADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFD 462 D G + E SV AG + A + G LA GI + D H A G Q A R A P LLEP+ VE++ P++ +G + LN +RGH+ G + I+A +P+ E FG+ G LR+ TSG+A FD Sbjct: 534 DTVTGGRIPKEYIPSVDAGIRDAMQVGVLAGYPTVGIKATLVDGAYHDVDSSEMAFRIAGSQAFKEASR-------RADPTLLEPIMSVEVRTPDEYMGDVIGDLNSRRGHIQSMQDSSGIKV--IQARVPLSEMFGYIGDLRSKTSGRAVYSMTFD 681
BLAST of CF834231 vs. ExPASy Swiss-Prot
Match: EFG_STRRA (Elongation factor G (Fragment) OS=Streptomyces ramocissimus GN=fus PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.813e-11 Identity = 49/145 (33.79%), Postives = 68/145 (46.90%), Query Frame = 1 Query: 49 SVVAGFQWASKEGALAEENMRGICFEVCDVVLHAD-----AIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHW 468 SV AG Q A + G LA M G+ + D H A G Q A R AKP LLEP+ VE+ PE +G + +N +RG + +R G + +K +P+ E FG+ G LR+ TSG+A FD + Sbjct: 188 SVDAGAQEAMQFGILAGYEMTGVRVTLLDGAYHEVDSSELAFKIAGSQAFKEAAR-------KAKPVLLEPMMAVEVTTPEDYMGEVIGDINSRRGQIQAMEERAGARV--VKGLVPLSEMFGYVGDLRSKTSGRASYSMQFDSY 323
BLAST of CF834231 vs. ExPASy Swiss-Prot
Match: EFG_NOCSJ (Elongation factor G OS=Nocardioides sp. (strain BAA-499 / JS614) GN=fusA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.813e-11 Identity = 51/145 (35.17%), Postives = 69/145 (47.59%), Query Frame = 1 Query: 49 SVVAGFQWASKEGALAEENMRGICFEVCDVVLHAD-----AIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHW 468 SV G Q A + G LA M + + D H A G Q A R AKP LLEP++ VE+ PE LG + +N +RGH+ + +R G + I A +P+ E FG+ G LR+ TSGQA FD + Sbjct: 550 SVDQGAQEAMEFGVLAGYPMVDVKVTLEDGAYHDVDSSELAFKIAGNQAFKEAAR-------QAKPVLLEPMFAVEVTTPETFLGTVIGDINSRRGHIQAQEERHGDMV--ISALVPLSEMFGYVGDLRSKTSGQASYSMEFDSY 685 The following BLAST results are available for this feature:
BLAST of CF834231 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 125
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834231 ID=CF834231; Name=CF834231; organism=Citrus sinensis; type=EST; length=672bpback to top |