CF834231

Overview
NameCF834231
Unique NameCF834231
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length672
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834231 vs. ExPASy Swiss-Prot
Match: EF2_PYRHO (Elongation factor 2 OS=Pyrococcus horikoshii GN=fusA PE=3 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 2.766e-24
Identity = 66/182 (36.26%), Postives = 98/182 (53.85%), Query Frame = 1
Query:    7 DMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSD-PLEPGTQAAQLVADIRKRKGL 549
            D  KGVQYLNE+ D ++ GF  A  EG LA E +  +   + D  +H D +HRG  Q+ P  R  I+ + + + P L EP   V I  P + +G +   + Q+RG +  +M++ G  +  I A  PV E FGF+G++R+ATSG+A        W    +     P   A Q++  IR+RKGL
Sbjct:  546 DNTKGVQYLNEVMDLLIDGFHQAMDEGPLAREPVMKVIVRLLDAQVHEDNVHRGPAQIYPAIRTAIHCAMMKSNPVLYEPYQKVIINIPYEYMGAVSREITQRRGQLV-DMKQEG-EVMTIIAEAPVAEMFGFAGSIRSATSGRAL-------WSTEHAGFKRVPNELAQQIIRQIRQRKGL 718          
BLAST of CF834231 vs. ExPASy Swiss-Prot
Match: EF2_PYRAB (Elongation factor 2 OS=Pyrococcus abyssi GN=fusA PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.766e-24
Identity = 66/182 (36.26%), Postives = 98/182 (53.85%), Query Frame = 1
Query:    7 DMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSD-PLEPGTQAAQLVADIRKRKGL 549
            D  KGVQYLNE+ D ++ GF  A  EG LA+E +  +   + D  +H D +HRG  Q+ P  R  I+ + + + P L EP   V I  P + +G +   + Q+RG +  +M++ G  +  I A  PV E FGF+G +R+ATSG+A        W    +     P   A Q++  IR+RKGL
Sbjct:  546 DNTKGVQYLNEVMDLLIDGFHQAMDEGPLAKEPVMKVIVRLIDAQVHEDNVHRGPAQIYPAIRTAIHCAMMKSNPVLYEPYQKVIINIPYEYMGAVSREITQRRGQLV-DMKQEG-EVMTIIAEAPVAEMFGFAGAIRSATSGRAL-------WSTEHAGFKRVPNELAQQIIRQIRQRKGL 718          
BLAST of CF834231 vs. ExPASy Swiss-Prot
Match: EF2_METST (Elongation factor 2 OS=Methanosphaera stadtmanae (strain DSM 3091) GN=fusA PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.766e-24
Identity = 63/179 (35.20%), Postives = 101/179 (56.42%), Query Frame = 1
Query:   16 KGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSD-PLEPGTQAAQLVADIRKRKGL 549
            +G+QYL+EIK+ ++ GF+ A  +G LA E   GI   + D  +H DA+HRG  QV+P  R+ +Y + + A+P L+EP+  V I  P+  +G     +  +RG + E  Q     +  I++ +PV E FGF+G +R+A  G    +C+   W   +S     P     ++V +IR+RKGL
Sbjct:  549 RGIQYLDEIKELLMEGFESALDDGPLANEKAMGIKISLMDAKIHEDAVHRGPAQVLPAIRKAVYGAIMLAQPTLMEPMQKVYISVPQDYMGAATREVQNRRGQIVEMGQE--GDMSTIESKVPVSEMFGFAGDIRSAAEG----RCI---WSTENSGFERIPRELQNKIVKEIRERKGL 718          
BLAST of CF834231 vs. ExPASy Swiss-Prot
Match: EF2_THEAC (Elongation factor 2 OS=Thermoplasma acidophilum GN=fusA PE=3 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 3.612e-24
Identity = 65/186 (34.95%), Postives = 104/186 (55.91%), Query Frame = 1
Query:    1 VFDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQ 558
            +FD+ +G+QYL+E  + ++  F      G LA E + G+   + D  LH D+IHRG  QVIP  R  IY +   AK  LLEPV  V I  P++ +G   + + Q+RG + E+M++ G  + ++ A +PV   FGF+  +R AT G+     V   ++      + P  Q + +V  IR+RKGL+++
Sbjct:  545 MFDVTRGIQYLDETMELLIEAFVEVMNRGPLANEKVFGVKARLVDAKLHEDSIHRGPAQVIPAGRNSIYGAMCEAKRVLLEPVQRVFINVPQEEMGAAINEIQQRRG-IIEDMKQEGDEI-SLTAKVPVAGMFGFASAIRGATGGK-----VLWSFENAGYQKVPPELQDS-IVRSIRERKGLRQE 722          
BLAST of CF834231 vs. ExPASy Swiss-Prot
Match: EF2_META3 (Elongation factor 2 OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=fusA PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.718e-24
Identity = 65/184 (35.33%), Postives = 104/184 (56.52%), Query Frame = 1
Query:    1 VFDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLK 552
            + +M +G+  L+E ++ ++ GF+ A K G LA E  +G+  ++ D V H DAIHRG  Q+IP  R  +  +   A   LLEP+  V I  P+  +G     L+ +RG +  +M++ G  +  IK+  PV E FGF+G +R AT G+      F  ++ + ++ L+P     Q+V +IR RKGLK
Sbjct:  550 LLNMTRGIVQLDEARELIIEGFKEAVKNGPLAAEKCQGVKVKLMDAVFHEDAIHRGPAQLIPAVRTGVRDAIAQANVGLLEPIQNVYISTPQDYMGDAMKELSNRRGQIL-DMEQEG-DMTTIKSKAPVSEMFGFAGAIRGATQGRCLWSIEFGGFEKVPTE-LQP-----QIVKEIRTRKGLK 725          
BLAST of CF834231 vs. ExPASy Swiss-Prot
Match: EF2_METTH (Elongation factor 2 OS=Methanobacterium thermoautotrophicum GN=fusA PE=3 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 6.162e-24
Identity = 58/185 (31.35%), Postives = 102/185 (55.14%), Query Frame = 1
Query:    7 DMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSD-PLEPGTQAAQLVADIRKRKGLKEQ 558
            +M +G+QYL+EIK+ ++ GF+ A   G +A+E + G+  ++ D  +H DA+HRG  QV+P  R+ I+ + ++A+P LLEP+  V I  P+  +G     +  +RG +    Q     +  +++ +PV E FGF+G +R+AT G+         W   ++     P      +  ++R RKGL  +
Sbjct:  546 NMTRGIQYLDEIKELLMDGFESAMDNGPVAKEKVMGVKIKLMDAKIHEDAVHRGPAQVLPAIRKGIFGAMMSAEPVLLEPIQKVFINVPQDYMGSATREIQNRRGQIVNMTQE--GDMVTVESTVPVAEMFGFAGDIRSATEGRCL-------WSTENAGFERLPNELQHTITREVRTRKGLSPE 721          
BLAST of CF834231 vs. ExPASy Swiss-Prot
Match: EF2_METMP (Elongation factor 2 OS=Methanococcus maripaludis GN=fusA PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.048e-24
Identity = 62/186 (33.33%), Postives = 104/186 (55.91%), Query Frame = 1
Query:    1 VFDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQ 558
            + +M +G+  L+E ++ ++ GF+   + G LA E ++G+   + D   H DAIHRG  Q+IP  R  +  +   AKP LLEP+  V I  P+  +G     +N +RG +  +M++ G  +  IK+ +PV E FGF+G +R AT G+      F  ++ + ++ L+P     ++   IR RKGLK +
Sbjct:  550 IVNMTRGIVQLDEARELIIEGFKEGVRNGPLAAEKVQGVKIRLVDATFHEDAIHRGPAQIIPAVRFGVRDAVAQAKPVLLEPMQSVYINTPQDYMGDGMKEINNRRGQIL-DMEQEG-DMSIIKSSVPVAEMFGFAGAIRGATQGRCLWSVEFSGFERVPNE-LQP-----KIAKQIRDRKGLKSE 727          
BLAST of CF834231 vs. ExPASy Swiss-Prot
Match: EF2_METM7 (Elongation factor 2 OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=fusA PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.048e-24
Identity = 62/186 (33.33%), Postives = 104/186 (55.91%), Query Frame = 1
Query:    1 VFDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQ 558
            + +M +G+  L+E ++ ++ GF+   + G LA E ++G+   + D   H DAIHRG  Q+IP  R  +  +   AKP LLEP+  V I  P+  +G     +N +RG +  +M++ G  +  IK+ +PV E FGF+G +R AT G+      F  ++ + ++ L+P     ++   IR RKGLK +
Sbjct:  550 IVNMTRGIVQLDEARELIIEGFKEGVRNGPLAAEKVQGVKIRLVDATFHEDAIHRGPAQIIPAVRFGVRDAVAQAKPVLLEPMQSVYINTPQDYMGDGMKEINNRRGQIL-DMEQEG-DMSIIKSSVPVAEMFGFAGAIRGATQGRCLWSVEFSGFERVPAE-LQP-----KIAKQIRDRKGLKSE 727          
BLAST of CF834231 vs. ExPASy Swiss-Prot
Match: EF2_METM6 (Elongation factor 2 OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=fusA PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.048e-24
Identity = 62/186 (33.33%), Postives = 104/186 (55.91%), Query Frame = 1
Query:    1 VFDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQ 558
            + +M +G+  L+E ++ ++ GF+   + G LA E ++G+   + D   H DAIHRG  Q+IP  R  +  +   AKP LLEP+  V I  P+  +G     +N +RG +  +M++ G  +  IK+ +PV E FGF+G +R AT G+      F  ++ + ++ L+P     ++   IR RKGLK +
Sbjct:  550 IVNMTRGIVQLDEARELIIEGFKEGVRNGPLAAEKVQGVKIRLVDATFHEDAIHRGPAQIIPAVRFGVRDAVAQAKPVLLEPMQSVYINTPQDYMGDGMKEINNRRGQIL-DMEQEG-DMSIIKSSVPVAEMFGFAGAIRGATQGRCLWSVEFSGFERVPAE-LQP-----KIAKQIRDRKGLKSE 727          
BLAST of CF834231 vs. ExPASy Swiss-Prot
Match: EF2_THESM (Elongation factor 2 OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=fusA PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.051e-23
Identity = 65/182 (35.71%), Postives = 96/182 (52.75%), Query Frame = 1
Query:    7 DMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSD-PLEPGTQAAQLVADIRKRKGL 549
            D  KG+QYLNE+ D +V GF  A  EG LA E +  +   + D  +H D +HRG  Q+ P  R  I+ + + + P L EP   V I  P + +G +   +NQ+RG +  +M++ G  +  I +  PV E FGF+G +R ATSG+A        W    +     P   A  ++  IR+RKGL
Sbjct:  546 DNTKGLQYLNEVMDLLVDGFHQAMDEGPLAREPVMKVIVRLVDAKIHEDNVHRGPAQIYPAIRTAIHCAMMKSNPVLYEPYQKVVINVPYEYMGSVSREMNQRRGQLI-DMRQEGEVMI-IISEAPVAEMFGFAGAIRGATSGRAL-------WSTEHAGFKRVPTELAINIIRQIRQRKGL 718          
The following BLAST results are available for this feature:
BLAST of CF834231 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 125
Match NameE-valueIdentityDescription
EF2_PYRHO2.766e-2436.26Elongation factor 2 OS=Pyrococcus horikoshii GN=fu... [more]
EF2_PYRAB2.766e-2436.26Elongation factor 2 OS=Pyrococcus abyssi GN=fusA P... [more]
EF2_METST2.766e-2435.20Elongation factor 2 OS=Methanosphaera stadtmanae (... [more]
EF2_THEAC3.612e-2434.95Elongation factor 2 OS=Thermoplasma acidophilum GN... [more]
EF2_META34.718e-2435.33Elongation factor 2 OS=Methanococcus aeolicus (str... [more]
EF2_METTH6.162e-2431.35Elongation factor 2 OS=Methanobacterium thermoauto... [more]
EF2_METMP8.048e-2433.33Elongation factor 2 OS=Methanococcus maripaludis G... [more]
EF2_METM78.048e-2433.33Elongation factor 2 OS=Methanococcus maripaludis (... [more]
EF2_METM68.048e-2433.33Elongation factor 2 OS=Methanococcus maripaludis (... [more]
EF2_THESM1.051e-2335.71Elongation factor 2 OS=Thermococcus sibiricus (str... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05C14_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05C14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834231 ID=CF834231; Name=CF834231; organism=Citrus sinensis; type=EST; length=672bp
GTCTTTGATATGTGTAAGGGAGTTCAATACTTGAATGAAATTAAGGATTC
TGTTGTTGCTGGTTTCCAGTGGGCATCGAAAGAAGGTGCGCTGGCTGAAG
AGAACATGAGAGGTATCTGCTTTGAAGTATGTGATGTTGTTCTTCACGCT
GATGCCATTCACAGAGGTGGTGGTCAAGTCATTCCTACTGCTAGGAGGGT
CATATATGCTTCCCAGCTCACAGCCAAGCCCAGGCTTCTTGAGCCTGTCT
ACATGGTCGAAATACAGGCTCCCGAGCAGGCCCTTGGTGGTATTTACAGT
GTTCTCAATCAGAAACGTGGTCACGTGTTCGAGGAAATGCAGAGACCTGG
TACCCCCCTTTACAACATCAAGGCTTACCTTCCCGTCATCGAGTCCTTTG
GATTCTCAGGCACTTTGAGGGCTGCAACGTCAGGACAGGCCTTCCCACAA
TGTGTGTTTGATCACTGGGACATGATGTCATCCGATCCACTGGAGCCTGG
TACACAGGCTGCACAGCTTGTTGCTGATATCAGGAAGAGGAAGGGCTTGA
AGGAGCAAATGACACCACTATCTGAGTTTGAGGACAAGCTGTAAACATTT
CGTCTTGACATCAAGGGTGAGATTGCGCAGCTTGTTGCTGATATCAGGAA
GAGGGAGCAAATGACACCGCTA
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