CF834252
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834252 vs. ExPASy Swiss-Prot
Match: CHI11_ORYSJ (Chitinase 11 OS=Oryza sativa subsp. japonica GN=Cht11 PE=2 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.039e-41 Identity = 75/132 (56.82%), Postives = 104/132 (78.79%), Query Frame = -2 Query: 172 GRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIISGGIECGKGWNSFVA-NRIGFFTTFCGKFGIQPGDNLD*YNQGPYG 564 GRGPIQLT NY G+ALG+DL+NNPDL+++DPV++F++AIWFWMTAQ PKPSCH+VI ++W PS +D ++ RLPGYG+ TNII+GG ECGKG+++ A +R+G++ +C F + GDN+ +Q PYG Sbjct: 123 GRGPIQLTHKYNYQLAGDALGLDLVNNPDLVSSDPVVAFRTAIWFWMTAQSPKPSCHDVITNQWTPSGDDRSSGRLPGYGMATNIINGGEECGKGYSTDNAKDRVGYYKRYCDMFRVGYGDNIACRDQKPYG 254
BLAST of CF834252 vs. ExPASy Swiss-Prot
Match: CHI6_POPTR (Acidic endochitinase WIN6 OS=Populus trichocarpa GN=WIN6 PE=2 SV=2) HSP 1 Score: 169.088 bits (427), Expect = 1.357e-41 Identity = 78/135 (57.78%), Postives = 96/135 (71.11%), Query Frame = -2 Query: 163 GRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIISGGIECGKGW-NSFVANRIGFFTTFCGKFGIQPGDNLD*YNQGPYGHNL 564 GRGPIQL+WN NY CG+ L + LL P+L+ TDPV+SFK+AIWFWM Q PKPSCH VI W PSA D+ A R+PGYG+ TNII+GGIECG+G N+ +RIGF+ +C G G NLD Y Q P+G+ L Sbjct: 199 GRGPIQLSWNYNYGLCGDDLKLPLLQEPELVETDPVISFKTAIWFWMKPQSPKPSCHAVITGNWTPSAADLEAGRVPGYGVITNIINGGIECGQGGPNAANEDRIGFYKKYCDSLGTTYGSNLDCYQQRPFGYGL 333
BLAST of CF834252 vs. ExPASy Swiss-Prot
Match: CHIA_SOLCI (Acidic endochitinase pcht28 OS=Solanum chilense PE=2 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 1.772e-41 Identity = 77/129 (59.69%), Postives = 97/129 (75.19%), Query Frame = -2 Query: 184 GRGPIQLTWNCNYLRCGEALGV--DLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIISGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNLD*YNQ 564 GRGPIQLT NY R G+ +GV DL+NNPDL+ATDP++SF++AIWFWMTAQ KPSCH VII +W PS D A+R+PGYG+ TNII+GG+EC G N+ V +RIGF+ +CG + G+NLD NQ Sbjct: 119 GRGPIQLTHQSNYERAGQGIGVGQDLVNNPDLVATDPIISFRTAIWFWMTAQDNKPSCHNVIIGQWTPSPADTAANRVPGYGVITNIINGGLECNMGPNTAVESRIGFYRRYCGMLNVPTGENLDCNNQ 247
BLAST of CF834252 vs. ExPASy Swiss-Prot
Match: CHI8_ORYSJ (Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht8 PE=2 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 8.793e-41 Identity = 77/127 (60.63%), Postives = 92/127 (72.44%), Query Frame = -2 Query: 184 GRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIISGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNLD*YNQ 564 GRGPIQLT NY G ALG+DL+ NPDL++TD V+SFK+AIWFWMTAQ KPSCH+VI+ W PSA D A R+PGYG+ TNII+GGIECG G N +RIG++ +C G G NLD YNQ Sbjct: 130 GRGPIQLTGQSNYQAAGNALGLDLVGNPDLVSTDAVVSFKTAIWFWMTAQGNKPSCHDVILGRWTPSAADTAAGRVPGYGVITNIINGGIECGVGQNDANVDRIGYYKRYCDMLGAGYGSNLDCYNQ 256
BLAST of CF834252 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 1.959e-40 Identity = 77/127 (60.63%), Postives = 94/127 (74.02%), Query Frame = -2 Query: 184 GRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIISGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNLD*YNQ 564 GRGPIQLT NY G+A+ DL+NNPDL+ATD +SFK+AIWFWMT Q KPSCH+VI W PSA D +A+R+PGYG+ TNII+GGIECGKG N+ V +RIG++ + PGDNLD YNQ Sbjct: 122 GRGPIQLTGQSNYDLAGKAIEQDLVNNPDLVATDATVSFKTAIWFWMTPQGNKPSCHDVITGRWTPSAADTSANRVPGYGVITNIINGGIECGKGQNARVEDRIGYYRRNVSIMNVAPGDNLDCYNQ 248
BLAST of CF834252 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 1.959e-40 Identity = 77/127 (60.63%), Postives = 94/127 (74.02%), Query Frame = -2 Query: 184 GRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIISGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNLD*YNQ 564 GRGPIQLT NY + G A+ DL+NNPDL+ATD +SFK+AIWFWMT Q KPS H+VII W PSA D +A+R PG G+ TNII+GGIECG G N+ V +RIG++ +CG + PGDNLD YNQ Sbjct: 121 GRGPIQLTNQNNYEKAGNAIRQDLVNNPDLVATDATISFKTAIWFWMTPQDNKPSSHDVIIGSWTPSAADQSANRAPGCGVITNIINGGIECGVGPNAAVEDRIGYYRRYCGMLNVAPGDNLDCYNQ 247
BLAST of CF834252 vs. ExPASy Swiss-Prot
Match: CHIX_PEA (Endochitinase OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 2.558e-40 Identity = 76/127 (59.84%), Postives = 95/127 (74.80%), Query Frame = -2 Query: 184 GRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIISGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNLD*YNQ 564 GRGPIQLT N NY G+A+ DL+NNPDLL+T+P +SFK+AIWFWMT Q KPS H+VI W PSA D +A R+PGYG+ TNII+GGIECG G ++ V +R+GF+ +C FG+ PG NLD NQ Sbjct: 190 GRGPIQLTHNYNYGLAGQAIKEDLINNPDLLSTNPTVSFKTAIWFWMTPQANKPSSHDVITGRWTPSAADSSAGRVPGYGVITNIINGGIECGHGQDNRVDDRVGFYKRYCQIFGVDPGGNLDCNNQ 316
BLAST of CF834252 vs. ExPASy Swiss-Prot
Match: CHIA_SOLLC (Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3 PE=1 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 4.364e-40 Identity = 75/129 (58.14%), Postives = 94/129 (72.87%), Query Frame = -2 Query: 184 GRGPIQLTWNCNYLRCGEALGV--DLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIISGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNLD*YNQ 564 GRGPIQLT NY R G+ +GV +L+NNPDL+ATDP++SFK+AIWFWMT Q KPSCH VII +W PS D A+R+PGYG+ TNII+G ECG G N+ +RIGF+ +CG + G+NLD NQ Sbjct: 119 GRGPIQLTHQSNYERAGQGIGVGQELVNNPDLVATDPIISFKTAIWFWMTEQDNKPSCHNVIIGQWTPSPKDTAANRVPGYGVITNIINGQFECGMGPNTAAESRIGFYRRYCGMLNVPTGENLDCNNQ 247
BLAST of CF834252 vs. ExPASy Swiss-Prot
Match: CHI12_ORYSJ (Chitinase 12 OS=Oryza sativa subsp. japonica GN=Cht12 PE=2 SV=2) HSP 1 Score: 162.925 bits (411), Expect = 9.722e-40 Identity = 73/131 (55.73%), Postives = 95/131 (72.52%), Query Frame = -2 Query: 172 GRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIISGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNLD*YNQGPYG 564 GRGPIQL++N NY G+A+G DLL +PDL+A+D +SF +A WFWMT Q PKPSCH V +W PSA+D A R+PGYG+ TNII+GG+ECG G + VA+RIGF+ +C G+ NLD Y+Q P+G Sbjct: 195 GRGPIQLSYNFNYGPAGQAIGADLLGDPDLVASDATVSFDTAFWFWMTPQSPKPSCHAVATGQWTPSADDQAAGRVPGYGVITNIINGGLECGHGEDDRVADRIGFYKRYCDILGVSYDANLDCYSQRPFG 325
BLAST of CF834252 vs. ExPASy Swiss-Prot
Match: CHIT_AVESA (Endochitinase (Fragments) OS=Avena sativa PE=1 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 1.552e-37 Identity = 72/130 (55.38%), Postives = 91/130 (70.00%), Query Frame = -2 Query: 175 GRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIISGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNLD*YNQGPY 564 GRGPIQ+++N NY G+A+GVDLL NPDL+ +D + FK+A+WFWMT Q PKPS H+VI W PS+ D A R+PGYG+ TNII GG+ECGKG S VA+RIG++ DNLD YNQ P+ Sbjct: 81 GRGPIQISYNYNYGAAGKAIGVDLLRNPDLVTSDNTVEFKTALWFWMTPQSPKPSSHDVITGRWSPSSTDKAAGRVPGYGVLTNIIDGGVECGKGQESHVADRIGYYK-----------DNLDCYNQKPF 199 The following BLAST results are available for this feature:
BLAST of CF834252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834252 ID=CF834252; Name=CF834252; organism=Citrus sinensis; type=EST; length=565bpback to top |