CF834252
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834252 vs. ExPASy Swiss-Prot
Match: CHIB_POPTR (Acidic endochitinase WIN6.2B OS=Populus trichocarpa PE=2 SV=2) HSP 1 Score: 154.451 bits (389), Expect = 3.458e-37 Identity = 70/127 (55.12%), Postives = 89/127 (70.08%), Query Frame = -2 Query: 160 NCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIISGGIECGKGW-NSFVANRIGFFTTFCGKFGIQPGDNLD*YNQGPYGHNLM 537 N NY CG+ L + LL P+L+ TDP ++FK+A+WFWMT Q PKPSCH VI + W PSA D A R+PGYG+ TNII+GGIECG+G N+ NRIGF+ T+C G G NLD Y Q P+G+ L+ Sbjct: 171 NYNYGLCGDDLNLPLLQEPELVETDPFIAFKTALWFWMTPQSPKPSCHAVITESWTPSAADSEAGRVPGYGVITNIINGGIECGQGGPNNANENRIGFYKTYCDSLGTTYGSNLDCYQQRPFGYGLL 297
BLAST of CF834252 vs. ExPASy Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 3.578e-34 Identity = 62/130 (47.69%), Postives = 92/130 (70.77%), Query Frame = -2 Query: 175 GRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIISGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNLD*YNQGPY 564 GRGPIQ++WN NY G+ALG D L NP+++A ++F++A+WFWMT + KPSCH+V++ E++P DV A+R G+GL TNI++GG+EC + ++ V NRIGF+ +C G+ G NLD +Q P+ Sbjct: 161 GRGPIQISWNFNYGPAGQALGFDGLRNPEIVANCSDIAFQTALWFWMTPRDTKPSCHQVMVGEYRPGPADVAANRTAGFGLVTNIVNGGLECNRAGDARVNNRIGFYRRYCQVLGVDVGPNLDCEHQQPF 290
BLAST of CF834252 vs. ExPASy Swiss-Prot
Match: CHI8_POPTR (Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 1.776e-33 Identity = 67/134 (50.00%), Postives = 85/134 (63.43%), Query Frame = -2 Query: 166 GRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPP-KPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIISGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNLD*YNQGPYGHN 564 GRGP+QL WN NY CG LG +LL+ P+ +ATDPVLSF++A+WFWM PSCHEVI EW PS D+ A R PG+G+ TNII+ G EC K + NRI ++ +C + PGDNL NQ + N Sbjct: 174 GRGPLQLRWNYNYGECGNYLGQNLLDEPEKVATDPVLSFEAALWFWMNPHSTGAPSCHEVITGEWSPSEADIEAGRKPGFGMLTNIITNGGECTKDGKTRQQNRIDYYLRYCDMLQVDPGDNLYCDNQETFEDN 307
BLAST of CF834252 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 1.776e-33 Identity = 64/136 (47.06%), Postives = 93/136 (68.38%), Query Frame = -2 Query: 157 RGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQ-PPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIISGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNLD*YNQGPYGHNLMA 561 RGP+Q+ +N NY GEA+G DLL NP+L+ATDP ++FK+A+W WMTA+ P +PS H V+ +W P+ D A R PGYGLTTNI++GG++C G A+R+ F+ +C G+ G NLD + Q P+ ++M+ Sbjct: 202 RGPMQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGYGLTTNILTGGLQCAGGNGG--ADRVAFYKRYCDVLGVGYGPNLDCFGQAPFDGDIMS 335
BLAST of CF834252 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSI (Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 2.319e-33 Identity = 64/136 (47.06%), Postives = 92/136 (67.65%), Query Frame = -2 Query: 157 RGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQ-PPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIISGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNLD*YNQGPYGHNLMA 561 RGP+Q+ +N NY GEA+G DLL NP+L+ATDP ++FK+A+W WMTA+ P +PS H V+ +W P+ D A R PGYGLTTNI++GG++C G A+R+ F+ +C G+ G NLD + Q P+ +M+ Sbjct: 202 RGPMQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGYGLTTNILTGGLQCAGGNGG--ADRVAFYKRYCDVLGVGYGPNLDCFGQAPFDGGIMS 335
BLAST of CF834252 vs. ExPASy Swiss-Prot
Match: AGI_URTDI (Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE=1 SV=3) HSP 1 Score: 103.605 bits (257), Expect = 7.000e-22 Identity = 53/123 (43.09%), Postives = 77/123 (62.60%), Query Frame = -2 Query: 199 RGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIISGGIECGKGWNSFV--ANRIGFFTTFCGKFGIQPGDNL 561 RGPIQLT N NY G+A+G DL+ NPDL+ DP++SFK+A+WFWM+ KPSCH++++ +AN A+R+P G+ NIIS G + F ++ IGF+ +C G+ G +L Sbjct: 239 RGPIQLTHNFNYGLAGQAIGEDLIQNPDLVEKDPIISFKTALWFWMSQHDNKPSCHDIVL-----NANSA-ANRIPNKGVIGNIISRAF----GHDDFAVRSSSIGFYKRYCDMLGVSYGHDL 351
BLAST of CF834252 vs. ExPASy Swiss-Prot
Match: CHIP_BETVU (Acidic endochitinase SP2 OS=Beta vulgaris GN=SP2 PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.724e-20 Identity = 53/123 (43.09%), Postives = 70/123 (56.91%), Query Frame = -2 Query: 199 GRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIISGGIECGKGWNSFVAN-RIGFFTTFCGKFGIQPGDNL 564 GRGP+QL+WN NY G+A+G D L NP+ +ATD SFK+A+WFWMT +V++ G+G TT I+G +EC G N AN RI F+ +C FG+ PGDNL Sbjct: 186 GRGPLQLSWNYNYALAGQAIGFDGLGNPEKVATDVNTSFKAAMWFWMT---------------------NVHSVMNQGFGATTKAINGALEC-NGQNQDQANDRIQFYKKYCADFGVAPGDNL 286
BLAST of CF834252 vs. ExPASy Swiss-Prot
Match: CHIT_DIOJA (Acidic endochitinase OS=Dioscorea japonica PE=1 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 1.906e-19 Identity = 46/122 (37.70%), Postives = 73/122 (59.84%), Query Frame = -2 Query: 199 GRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIISGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNL 564 GRGP+QL+WN NY+ G+ L D LN+PD++ DP++SFK+++WFW+ + VI+D P+ G+G T II+GG EC + + R+G++ +C + G+ PG+NL Sbjct: 144 GRGPMQLSWNYNYIDAGKELHFDGLNDPDIVGRDPIISFKTSLWFWI-----RKGVQYVILD---PN---------QGFGATIRIINGGQECDGHNTAQMMARVGYYQEYCAQLGVSPGNNL 248
BLAST of CF834252 vs. ExPASy Swiss-Prot
Match: CHI5_ORYSJ (Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 5.546e-19 Identity = 45/122 (36.89%), Postives = 66/122 (54.10%), Query Frame = -2 Query: 199 GRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIISGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNL 564 GRGP+Q++WN NY G+ +G D L +PD +A DP +SFK+A+WFWM N+V+ L G+G T I+G +EC V R+ ++ +C +FG+ PG NL Sbjct: 186 GRGPLQISWNYNYGPAGQNIGFDGLRDPDRVAQDPTISFKTALWFWM---------------------NNVHQVMLQGFGATIRAINGALECNGKNPGAVNARVNYYKDYCRQFGVDPGGNL 286
BLAST of CF834252 vs. ExPASy Swiss-Prot
Match: CHI6_ORYSJ (Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 3.595e-18 Identity = 42/122 (34.43%), Postives = 68/122 (55.74%), Query Frame = -2 Query: 199 GRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIISGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNL 564 GRGP+Q++WN NY G+++G D L +PD +A PVL+F++A+W+W + H+ + G+G T I+G +EC + V+NR+ ++ FC +FG+ PG NL Sbjct: 167 GRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSPVLAFQTALWYWTN------NVHDAFVSG-------------QGFGATIRAINGALECDGKNPTAVSNRVAYYQQFCQQFGVDPGSNL 269 The following BLAST results are available for this feature:
BLAST of CF834252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834252 ID=CF834252; Name=CF834252; organism=Citrus sinensis; type=EST; length=565bpback to top |