CF834268

Overview
NameCF834268
Unique NameCF834268
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length663
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834268 vs. ExPASy Swiss-Prot
Match: ALDOA_PONAB (Fructose-bisphosphate aldolase A OS=Pongo abelii GN=ALDOA PE=2 SV=3)

HSP 1 Score: 125.561 bits (314), Expect = 2.352e-28
Identity = 65/122 (53.28%), Postives = 83/122 (68.03%), Query Frame = -1
Query:  283 KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 648
            K + E I   TV AL+RT+P AV  + FLSGGQSEEEA+ NLNA+N+    KPW+L+FS+GRALQ S LKAW GK+EN++ AQ  ++ R  ANS A  G Y    Q G  A+ESL V ++ Y
Sbjct:  243 KFSHEEIVMATVTALRRTVPPAVTGITFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFVSNHAY 364          
BLAST of CF834268 vs. ExPASy Swiss-Prot
Match: ALDOB_RABIT (Fructose-bisphosphate aldolase B OS=Oryctolagus cuniculus GN=ALDOB PE=1 SV=3)

HSP 1 Score: 125.176 bits (313), Expect = 3.072e-28
Identity = 64/122 (52.46%), Postives = 75/122 (61.48%), Query Frame = -1
Query:  283 KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 648
            K TPE +A  TV AL RT+PAAVP + FLSGG SEE+AT NLNA+N     KPW LSFS+GRALQ S L AW GK EN +  Q AF+ R   N +A  G Y      G  + +SL    Y Y
Sbjct:  243 KYTPEQVAMATVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAENKKATQEAFMKRAVVNCQAAKGQYVHTGSSGAASTQSLFTASYTY 364          
BLAST of CF834268 vs. ExPASy Swiss-Prot
Match: ALFC1_PEA (Fructose-bisphosphate aldolase 1, chloroplastic (Fragment) OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.012e-28
Identity = 66/122 (54.10%), Postives = 81/122 (66.39%), Query Frame = -1
Query:  283 KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 648
            K +P  +AE+T+  L R +P AVP ++FLSGGQSE EAT NLNAMN  K+  PW +SFS+ RALQ + LK W G  ENV+ AQ A L R K+NS A LG Y GD +  E A + L VK Y Y
Sbjct:  238 KASPTKVAEYTLNLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMN--KSPNPWHVSFSYARALQNTALKTWGGLPENVKAAQEALLFRAKSNSLAQLGKYYGDGE-SEEAKKELFVKGYSY 356          
BLAST of CF834268 vs. ExPASy Swiss-Prot
Match: ALFC2_ARATH (Probable fructose-bisphosphate aldolase 2, chloroplastic OS=Arabidopsis thaliana GN=FBA2 PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.240e-28
Identity = 64/122 (52.46%), Postives = 80/122 (65.57%), Query Frame = -1
Query:  283 KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 648
            + TPE +A +T++ L+  +P AVP ++FLSGGQSE EAT NLNAMNQ     PW +SFS+ RALQ + LK W G+ ENV  AQ   L R KANS A LG Y G+ +  E A E + VK Y Y
Sbjct:  280 RATPEQVAAYTLKLLRNRVPPAVPGIMFLSGGQSEVEATLNLNAMNQ--APNPWHVSFSYARALQNTCLKTWGGRPENVNAAQTTLLARAKANSLAQLGKYTGEGE-SEEAKEGMFVKGYTY 398          
BLAST of CF834268 vs. ExPASy Swiss-Prot
Match: ALFC3_ARATH (Probable fructose-bisphosphate aldolase 3, chloroplastic OS=Arabidopsis thaliana GN=FBA3 PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 6.844e-28
Identity = 63/122 (51.64%), Postives = 82/122 (67.21%), Query Frame = -1
Query:  283 KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 648
            K +PE +A+ T+  L+R +P AVP ++FLSGGQSE EAT NLNAMNQ  +  PW +SFS+ RALQ S L+ W GK E ++ +Q A LVR KANS A LG Y  + +  E A + + VK Y Y
Sbjct:  273 KASPETVADFTLTMLKRRVPPAVPGIMFLSGGQSEAEATLNLNAMNQ--SPNPWHVSFSYARALQNSVLRTWQGKPEKIEASQKALLVRAKANSLAQLGKYSAEGE-NEDAKKGMFVKGYTY 391          
BLAST of CF834268 vs. ExPASy Swiss-Prot
Match: ALDOB_HUMAN (Fructose-bisphosphate aldolase B OS=Homo sapiens GN=ALDOB PE=1 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 6.844e-28
Identity = 64/122 (52.46%), Postives = 75/122 (61.48%), Query Frame = -1
Query:  283 KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 648
            K TPE +A  TV AL RT+PAAVP + FLSGG SEE+AT NLNA+N     KPW LSFS+GRALQ S L AW GK  N +  Q AF+ R  AN +A  G Y      G  + +SL    Y Y
Sbjct:  243 KYTPEQVAMATVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAANKEATQEAFMKRAMANCQAAKGQYVHTGSSGAASTQSLFTACYTY 364          
BLAST of CF834268 vs. ExPASy Swiss-Prot
Match: ALF2_LAMJA (Fructose-bisphosphate aldolase, non-muscle type OS=Lampetra japonica PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 8.938e-28
Identity = 61/122 (50.00%), Postives = 82/122 (67.21%), Query Frame = -1
Query:  283 KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 648
            + +P+ +A  TV AL+RT+P+AVP + FLSGGQSEE+A+ NLNA+NQL  ++PW+LSFS+GRALQ S LKAWAG   N+  A+  F  R   N  A  G Y      G  A+ESL + ++ Y
Sbjct:  243 RCSPQEVAMATVTALRRTVPSAVPGITFLSGGQSEEDASLNLNAINQLPLERPWALSFSYGRALQASVLKAWAGAPANIPAAKKEFEKRAAINGLAAQGKYVPAGSSGSAASESLFIANHNY 364          
BLAST of CF834268 vs. ExPASy Swiss-Prot
Match: ALDOB_SPAAU (Fructose-bisphosphate aldolase B OS=Sparus aurata GN=aldob PE=2 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 8.938e-28
Identity = 60/122 (49.18%), Postives = 80/122 (65.57%), Query Frame = -1
Query:  283 KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 648
            K TP+ +A  TV AL+RT+PA+VP + FLSGGQSEEEA+ +LNA+NQ+   +PW L+FS+GRALQ S L AW GK+ N    Q  F+ R K N  A+ G YK      + + +SL+   Y Y
Sbjct:  243 KFTPQEVAMATVTALRRTVPASVPGICFLSGGQSEEEASIHLNAINQVPLHRPWKLTFSYGRALQASALAAWQGKDANKAATQQVFVTRAKINGLASKGEYKPSGSADQASQQSLYTASYVY 364          
BLAST of CF834268 vs. ExPASy Swiss-Prot
Match: ALDOB_PONAB (Fructose-bisphosphate aldolase B OS=Pongo abelii GN=ALDOB PE=2 SV=3)

HSP 1 Score: 123.635 bits (309), Expect = 8.938e-28
Identity = 64/122 (52.46%), Postives = 75/122 (61.48%), Query Frame = -1
Query:  283 KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 648
            K TPE +A  TV AL RT+PAAVP + FLSGG SEE+AT NLNA+N     KPW LSFS+GRALQ S L AW GK  N +  Q AF+ R  AN +A  G Y      G  + +SL    Y Y
Sbjct:  243 KYTPEQVAMATVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAANKEATQEAFMKRAVANHQAAKGQYVHTGSSGAASTQSLFTACYTY 364          
BLAST of CF834268 vs. ExPASy Swiss-Prot
Match: ALDOC_CHICK (Fructose-bisphosphate aldolase C (Fragment) OS=Gallus gallus GN=ALDOC PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.525e-27
Identity = 62/122 (50.82%), Postives = 80/122 (65.57%), Query Frame = -1
Query:  283 KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 648
            K +PE IA  TV AL+RT+P AVP V FLSGGQSEEEA+ NLNA+N     +PW+L+FS+GRALQ S L AW G+ +N   A   F+ R + N  A LG Y+G       A +SL+V ++ Y
Sbjct:   16 KYSPEEIAMATVTALRRTVPPAVPGVTFLSGGQSEEEASINLNAINTCPLVRPWALTFSYGRALQASALSAWRGQRDNANAATEEFVKRAEVNGLAALGKYEGSGDDSGAAGQSLYVANHAY 137          
The following BLAST results are available for this feature:
BLAST of CF834268 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALDOA_PONAB2.352e-2853.28Fructose-bisphosphate aldolase A OS=Pongo abelii G... [more]
ALDOB_RABIT3.072e-2852.46Fructose-bisphosphate aldolase B OS=Oryctolagus cu... [more]
ALFC1_PEA4.012e-2854.10Fructose-bisphosphate aldolase 1, chloroplastic (F... [more]
ALFC2_ARATH5.240e-2852.46Probable fructose-bisphosphate aldolase 2, chlorop... [more]
ALFC3_ARATH6.844e-2851.64Probable fructose-bisphosphate aldolase 3, chlorop... [more]
ALDOB_HUMAN6.844e-2852.46Fructose-bisphosphate aldolase B OS=Homo sapiens G... [more]
ALF2_LAMJA8.938e-2850.00Fructose-bisphosphate aldolase, non-muscle type OS... [more]
ALDOB_SPAAU8.938e-2849.18Fructose-bisphosphate aldolase B OS=Sparus aurata ... [more]
ALDOB_PONAB8.938e-2852.46Fructose-bisphosphate aldolase B OS=Pongo abelii G... [more]
ALDOC_CHICK1.525e-2750.82Fructose-bisphosphate aldolase C (Fragment) OS=Gal... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05D18_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05D18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834268 ID=CF834268; Name=CF834268; organism=Citrus sinensis; type=EST; length=663bp
TTTTTTTAGCACAGAAAACTTATCAATTATGTGACAAAATCACAGAAATT
TCCTTCCATTAGGGGAAAAGGAAAAAAAAAAAACAAAAACAAACCTATAA
ACAGTTTTCAGTTTAGTTTTGATCAAAACCACTCAAACCGAAGTTCCCAA
GCTTTTTATTGCTCCACCTAATATGAAAAAGCCCTAAAACTATGAATGAG
AATGTGCCAACCTAATGTTCATACCGCCATTTACTCTCATAAAGTTCATA
AAGCACAACACCCAAAGCTTCAACTGTGCTTAGTATTTGTAGTCCTTGAC
ATGGAGAGACTCTGCGGCACCTTCACCAAGCTGGGCATCGCCCTTGTAAG
TACCGAGGGTAGCCTCAGAGTTGGCCTTGCACCTGACAAGGAAAGCAGCC
TGGGCCTTCTGCACATTCTCTTCCTTTCCAGCCCATGCCTTGAGAGTGCT
CTGCTGAAGTGCACGTCCAAAGGAAAAGGAAAGTGACCATGGCTTCTTCG
TCTTGAGCTGGTTCATGGCATTAAGGTTGCGGGTAGCCTCCTCCTCACTC
TGCCCACCAGACAAGAACACAACAGCAGGAACTGCTGCAGGCATAGTGCG
TTGCAGGGCCCGGACAGTGTGTTCAGCAATCACCTCCGGTGTAACTTTGG
GAGCTTCAGATCC
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