CF834269

Overview
NameCF834269
Unique NameCF834269
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length665
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834269 vs. ExPASy Swiss-Prot
Match: ALDOB_SPAAU (Fructose-bisphosphate aldolase B OS=Sparus aurata GN=aldob PE=2 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 2.202e-26
Identity = 57/120 (47.50%), Postives = 78/120 (65.00%), Query Frame = 1
Query:   22 TPEVIAEHTVRALQRTMPAAVPAVVFLSGGHSEEDATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 381
            TP+ +A  TV AL+RT+PA+VP + FLSGG SEE+A+ +LNA+NQ+   +PW L+FS+GRALQ S L AW GK+ N    Q  F+ R K N  A+ G YK      + + +SL+   Y Y
Sbjct:  245 TPQEVAMATVTALRRTVPASVPGICFLSGGQSEEEASIHLNAINQVPLHRPWKLTFSYGRALQASALAAWQGKDANKAATQQVFVTRAKINGLASKGEYKPSGSADQASQQSLYTASYVY 364          
BLAST of CF834269 vs. ExPASy Swiss-Prot
Match: ALDOC_CHICK (Fructose-bisphosphate aldolase C (Fragment) OS=Gallus gallus GN=ALDOC PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.755e-26
Identity = 59/120 (49.17%), Postives = 78/120 (65.00%), Query Frame = 1
Query:   22 TPEVIAEHTVRALQRTMPAAVPAVVFLSGGHSEEDATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 381
            +PE IA  TV AL+RT+P AVP V FLSGG SEE+A+ NLNA+N     +PW+L+FS+GRALQ S L AW G+ +N   A   F+ R + N  A LG Y+G       A +SL+V ++ Y
Sbjct:   18 SPEEIAMATVTALRRTVPPAVPGVTFLSGGQSEEEASINLNAINTCPLVRPWALTFSYGRALQASALSAWRGQRDNANAATEEFVKRAEVNGLAALGKYEGSGDDSGAAGQSLYVANHAY 137          
BLAST of CF834269 vs. ExPASy Swiss-Prot
Match: ALDOC_RAT (Fructose-bisphosphate aldolase C OS=Rattus norvegicus GN=Aldoc PE=1 SV=3)

HSP 1 Score: 117.857 bits (294), Expect = 4.905e-26
Identity = 60/120 (50.00%), Postives = 80/120 (66.67%), Query Frame = 1
Query:   22 TPEVIAEHTVRALQRTMPAAVPAVVFLSGGHSEEDATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 381
            +PE IA  TV AL+RT+P AVP V FLSGG SEE+A+ NLNA+N+    +PW+L+FS+GRALQ S L AW G+ +N   A   F+ R + N  A  G Y+G    G  AA+SL+V ++ Y
Sbjct:  245 SPEEIAMATVTALRRTVPPAVPGVTFLSGGQSEEEASLNLNAINRCSLPRPWALTFSYGRALQASALSAWRGQRDNAGAATEEFIKRAEMNGLAAQGKYEGSGD-GGAAAQSLYVANHAY 363          
BLAST of CF834269 vs. ExPASy Swiss-Prot
Match: ALF2_PLABA (Fructose-bisphosphate aldolase 2 OS=Plasmodium berghei (strain Anka) GN=ALDO2 PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.405e-26
Identity = 64/112 (57.14%), Postives = 77/112 (68.75%), Query Frame = 1
Query:   46 TVRALQRTMPAAVPAVVFLSGGHSEEDATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 381
            TVR L+RT+P A+P V FLSGG SEEDA+ NLN++N L    PW+L+FS+GRALQ S L  W GK+ENV KA+   L R +ANS AT G YKG A  G  A  SL+ K Y Y
Sbjct:  249 TVRTLRRTVPPALPGVAFLSGGQSEEDASINLNSINVLGPH-PWALTFSYGRALQASVLNTWQGKKENVAKARRVLLQRAEANSLATYGKYKGGAG-GSTAGASLYEKKYVY 358          
BLAST of CF834269 vs. ExPASy Swiss-Prot
Match: ALDOC_MOUSE (Fructose-bisphosphate aldolase C OS=Mus musculus GN=Aldoc PE=1 SV=4)

HSP 1 Score: 117.087 bits (292), Expect = 8.366e-26
Identity = 59/120 (49.17%), Postives = 80/120 (66.67%), Query Frame = 1
Query:   22 TPEVIAEHTVRALQRTMPAAVPAVVFLSGGHSEEDATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 381
            +PE IA  TV AL+RT+P AVP V FLSGG SEE+A+ NLNA+N+    +PW+L+FS+GRALQ S L AW G+ +N   A   F+ R + N  A  G Y+G    G  AA+SL++ ++ Y
Sbjct:  245 SPEEIAMATVTALRRTVPPAVPGVTFLSGGQSEEEASLNLNAINRCPLPRPWALTFSYGRALQASALNAWRGQRDNAGAATEEFIKRAEMNGLAAQGRYEGSGD-GGAAAQSLYIANHAY 363          
BLAST of CF834269 vs. ExPASy Swiss-Prot
Match: ALFC2_PEA (Fructose-bisphosphate aldolase 2, chloroplastic OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 2.691e-24
Identity = 57/107 (53.27%), Postives = 72/107 (67.29%), Query Frame = 1
Query:   22 TPEVIAEHTVRALQRTMPAAVPAVVFLSGGHSEEDATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGE 342
            +P  +AE+T+  L R +P AVP ++FLSGG SE +AT NLNAMN  K+  PW +SFS+ RALQ + LK W G  ENV+ AQ A L R K+NS A LG Y GD +  E
Sbjct:  234 SPTKVAEYTLNLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMN--KSPNPWHVSFSYARALQNTALKTWGGLPENVKAAQEALLFRAKSNSLAQLGKYIGDGESEE 338          
BLAST of CF834269 vs. ExPASy Swiss-Prot
Match: ALDOC_CARAU (Fructose-bisphosphate aldolase C OS=Carassius auratus GN=aldoc PE=2 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 3.886e-23
Identity = 59/116 (50.86%), Postives = 74/116 (63.79%), Query Frame = 1
Query:   34 IAEHTVRALQRTMPAAVPAVVFLSGGHSEEDATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 381
            IA  TV AL+RT+P AV  V FLSGG SEE+A+ NLNA+N     KPW+L+FS+GRALQ S L AW G +EN + A   FL R +AN  A  G Y      G  A +SL+V ++ Y
Sbjct:  249 IAMATVTALRRTVPPAVTGVTFLSGGQSEEEASINLNAINNCPLTKPWALTFSYGRALQASALSAWRGVKENEKAATEEFLKRAEANGLAAQGKYVSSGMDG-SAGQSLYVANHAY 363          
BLAST of CF834269 vs. ExPASy Swiss-Prot
Match: ALDCB_DANRE (Fructose-bisphosphate aldolase C-B OS=Danio rerio GN=aldocb PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.929e-22
Identity = 57/118 (48.31%), Postives = 73/118 (61.86%), Query Frame = 1
Query:   28 EVIAEHTVRALQRTMPAAVPAVVFLSGGHSEEDATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 381
            E IA  TV AL+RT+P AV  V FLSGG SEE+A+ NLN++N     KPW L+FS+GRALQ S L AW G + N + A   F+ R +AN  A  G Y      G  A +SL+V ++ Y
Sbjct:  247 EEIAMATVTALRRTVPPAVSGVTFLSGGQSEEEASVNLNSINNCPLAKPWPLTFSYGRALQASALSAWRGAKSNEKAATEEFIKRAEANGLAAQGKYVSSGTCG-AAGQSLYVANHAY 363          
BLAST of CF834269 vs. ExPASy Swiss-Prot
Match: ALF_LYMST (Fructose-bisphosphate aldolase (Fragment) OS=Lymnaea stagnalis PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.297e-22
Identity = 51/75 (68.00%), Postives = 58/75 (77.33%), Query Frame = 1
Query:   22 TPEVIAEHTVRALQRTMPAAVPAVVFLSGGHSEEDATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEE 246
            TPE IA  TV AL RT+PAAV  + FLSGG SEEDAT NLNA+NQ   +KPW L+FS+GRALQ S LKAW GK+E
Sbjct:   26 TPEDIARATVTALNRTVPAAVAGITFLSGGQSEEDATINLNAINQFPGRKPWPLTFSYGRALQASVLKAWGGKDE 100          
BLAST of CF834269 vs. ExPASy Swiss-Prot
Match: ALDCA_DANRE (Fructose-bisphosphate aldolase C-A OS=Danio rerio GN=aldoca PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 9.572e-22
Identity = 55/118 (46.61%), Postives = 71/118 (60.17%), Query Frame = 1
Query:   28 EVIAEHTVRALQRTMPAAVPAVVFLSGGHSEEDATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 381
            E +A  TV AL+RT+P AV  V FLSGG SEE+A+ NL+A+N  +  KPW+L+FSFGRALQ S LK W G+ EN   A   F+ R + NS A+ G Y            S ++  Y Y
Sbjct:  247 EEVAMATVTALRRTVPPAVTGVTFLSGGQSEEEASINLSAINNCRLVKPWALTFSFGRALQASALKTWRGQRENEAAATEEFIKRAEINSLASQGKYTVCGDSSGATGLSHYLSSYAY 364          
The following BLAST results are available for this feature:
BLAST of CF834269 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALDOB_SPAAU2.202e-2647.50Fructose-bisphosphate aldolase B OS=Sparus aurata ... [more]
ALDOC_CHICK3.755e-2649.17Fructose-bisphosphate aldolase C (Fragment) OS=Gal... [more]
ALDOC_RAT4.905e-2650.00Fructose-bisphosphate aldolase C OS=Rattus norvegi... [more]
ALF2_PLABA6.405e-2657.14Fructose-bisphosphate aldolase 2 OS=Plasmodium ber... [more]
ALDOC_MOUSE8.366e-2649.17Fructose-bisphosphate aldolase C OS=Mus musculus G... [more]
ALFC2_PEA2.691e-2453.27Fructose-bisphosphate aldolase 2, chloroplastic OS... [more]
ALDOC_CARAU3.886e-2350.86Fructose-bisphosphate aldolase C OS=Carassius aura... [more]
ALDCB_DANRE1.929e-2248.31Fructose-bisphosphate aldolase C-B OS=Danio rerio ... [more]
ALF_LYMST4.297e-2268.00Fructose-bisphosphate aldolase (Fragment) OS=Lymna... [more]
ALDCA_DANRE9.572e-2246.61Fructose-bisphosphate aldolase C-A OS=Danio rerio ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05D18_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05D18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834269 ID=CF834269; Name=CF834269; organism=Citrus sinensis; type=EST; length=665bp
TGGATCTGAACCTCTTAAGTTACACCGGAGGTGATTGCTGAACACACTGT
CCGTGCCCTGCAACGCACTATGCCTGCAGCAGTTCCTGCTGTTGTGTTCT
TGTCTGGTGGGCACAGTGAGGAGGACGCTACCCGCAACCTTAATGCCATG
AACCAGCTCAAGACGAAGAAGCCATGGTCACTTTCCTTTTCCTTTGGACG
TGCACTTCAGCAGAGCACTCTCAAGGCATGGGCTGGAAAGGAAGAGAATG
TGCAGAAGGCCCAGGCTGCTTTCCTTGTCAGGTGCAAGGCCAACTCTGAG
GCTACCCTCGGTACTTACAAGGGCGATGCCCAGCTTGGTGAAGGTGCCGC
AGAGTCTCTCCATGTCAAGGACTACAAATACTGAGCGCAGTTGAAGCTTT
GGGTGTTGTGCTTTATGAACTTTATGAGAGTAAATGGCGGTATGAACATT
AGGTTGGCACATTCTCATTCATAGTTTTAGGGCTTTTTCATATTAGGTGG
AGCAATAAAAAGCTTGGGAACTTCGGTTTGAGTGGTTTTGATCAAAACTA
AACTGAAAACTGTTTATGCTTTTGTTTTTGTTTTTTTTTTTTCCTTTTCC
CCTAATGGCGCTAAATTTCTGTGATTTTGTCACATAATTGATAATGTTTT
CTTGTGCTTAAAAAA
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