CF834278

Overview
NameCF834278
Unique NameCF834278
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length735
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834278 vs. ExPASy Swiss-Prot
Match: PPIA_GORGO (Peptidyl-prolyl cis-trans isomerase A OS=Gorilla gorilla gorilla GN=PPIA PE=3 SV=3)

HSP 1 Score: 218.394 bits (555), Expect = 3.196e-56
Identity = 106/166 (63.86%), Postives = 124/166 (74.70%), Query Frame = -3
Query:  233 VFFDMTVGGQPAGRIVMELLPDVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFRRVIPGFMCQXXXXXXXXXXXGESICGSKFADENFVKKHTGPGILSMANAGPGTTGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 730
            VFFD+ V G+P GR+  EL  D  P+TAENFRAL TGEKG G       YKGS F R+IPGFMCQ           G+SI G KF DENF+ KHTGPGILSMANAGP T GSQFF+CTAKTEWLDGKHVVFG+V EGM++V+A+E+ GS +G+T+K + IADCGQL
Sbjct:    6 VFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164          
BLAST of CF834278 vs. ExPASy Swiss-Prot
Match: PPIA_CERAE (Peptidyl-prolyl cis-trans isomerase A OS=Cercopithecus aethiops GN=PPIA PE=2 SV=2)

HSP 1 Score: 218.394 bits (555), Expect = 3.196e-56
Identity = 106/166 (63.86%), Postives = 124/166 (74.70%), Query Frame = -3
Query:  233 VFFDMTVGGQPAGRIVMELLPDVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFRRVIPGFMCQXXXXXXXXXXXGESICGSKFADENFVKKHTGPGILSMANAGPGTTGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 730
            VFFD+ V G+P GR+  EL  D  P+TAENFRAL TGEKG G       YKGS F R+IPGFMCQ           G+SI G KF DENF+ KHTGPGILSMANAGP T GSQFF+CTAKTEWLDGKHVVFG+V EGM++V+A+E+ GS +G+T+K + IADCGQL
Sbjct:    6 VFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164          
BLAST of CF834278 vs. ExPASy Swiss-Prot
Match: PPIA_CRIGR (Peptidyl-prolyl cis-trans isomerase A OS=Cricetulus griseus GN=PPIA PE=2 SV=2)

HSP 1 Score: 217.624 bits (553), Expect = 5.452e-56
Identity = 105/166 (63.25%), Postives = 124/166 (74.70%), Query Frame = -3
Query:  233 VFFDMTVGGQPAGRIVMELLPDVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFRRVIPGFMCQXXXXXXXXXXXGESICGSKFADENFVKKHTGPGILSMANAGPGTTGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 730
            VFFD++  G+P GR+  EL  D  P+TAENFRAL TGEKG G       YKGSSF R+IPGFMCQ           G SI G KF DENF+ KHTGPGILSMANAGP T GSQFF+CTAKTEWLDGKHVVFG+V EGM++V+A+E+ GS +G+T+K + I+DCGQL
Sbjct:    6 VFFDISADGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSSFHRIIPGFMCQGGDFTRHNGTGGRSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITISDCGQL 164          
BLAST of CF834278 vs. ExPASy Swiss-Prot
Match: PPI2_SYNY3 (Peptidyl-prolyl cis-trans isomerase slr1251 OS=Synechocystis sp. (strain PCC 6803) GN=slr1251 PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 5.452e-56
Identity = 104/167 (62.28%), Postives = 126/167 (75.45%), Query Frame = -3
Query:  233 KVFFDMTVGGQPAGRIVMELLPDVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFRRVIPGFMCQXXXXXXXXXXXGESICGSKFADENFVKKHTGPGILSMANAGPGTTGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 733
            KVFFD+T+G   AGRIVMEL  +VTP+TAENFRALCTGEKG+GK+GKPLH+KGS F RVI  FM Q           GESI G KFADENF  KH  PG+LSMANAGP T GSQFF+      WLDGKHVVFG+VVEG+++++ +E  GS SG+T + +VI+DCG++
Sbjct:    4 KVFFDITIGSDTAGRIVMELFDEVTPKTAENFRALCTGEKGVGKAGKPLHFKGSHFHRVITDFMAQGGDFTRGNGTGGESIYGEKFADENFQLKHDRPGLLSMANAGPNTNGSQFFLTFVPCPWLDGKHVVFGEVVEGLEILEQLEANGSQSGQTKQAIVISDCGEI 170          
BLAST of CF834278 vs. ExPASy Swiss-Prot
Match: PPIA_PIG (Peptidyl-prolyl cis-trans isomerase A OS=Sus scrofa GN=PPIA PE=1 SV=2)

HSP 1 Score: 217.238 bits (552), Expect = 7.120e-56
Identity = 105/166 (63.25%), Postives = 124/166 (74.70%), Query Frame = -3
Query:  233 VFFDMTVGGQPAGRIVMELLPDVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFRRVIPGFMCQXXXXXXXXXXXGESICGSKFADENFVKKHTGPGILSMANAGPGTTGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 730
            VFFD+ V G+P GR+  EL  D  P+TAENFRAL TGEKG G       YKGS F R+IPGFMCQ           G+SI G KF DENF+ KHTGPGILSMANAGP T GSQFF+CTAKTEWLDGKHVVFG+V EGM++V+A+E+ GS +G+T+K + IADCGQ+
Sbjct:    6 VFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFDDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQI 164          
BLAST of CF834278 vs. ExPASy Swiss-Prot
Match: PPIA_BOVIN (Peptidyl-prolyl cis-trans isomerase A OS=Bos taurus GN=PPIA PE=1 SV=2)

HSP 1 Score: 217.238 bits (552), Expect = 7.120e-56
Identity = 105/166 (63.25%), Postives = 124/166 (74.70%), Query Frame = -3
Query:  233 VFFDMTVGGQPAGRIVMELLPDVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFRRVIPGFMCQXXXXXXXXXXXGESICGSKFADENFVKKHTGPGILSMANAGPGTTGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 730
            VFFD+ V G+P GR+  EL  D  P+TAENFRAL TGEKG G       YKGS F R+IPGFMCQ           G+SI G KF DENF+ KHTGPGILSMANAGP T GSQFF+CTAKTEWLDGKHVVFG+V EGM++V+A+E+ GS +G+T+K + IADCGQ+
Sbjct:    6 VFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFDDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQI 164          
BLAST of CF834278 vs. ExPASy Swiss-Prot
Match: PPIA_SAGOE (Peptidyl-prolyl cis-trans isomerase A OS=Saguinus oedipus GN=PPIA PE=3 SV=3)

HSP 1 Score: 216.468 bits (550), Expect = 1.215e-55
Identity = 105/166 (63.25%), Postives = 123/166 (74.10%), Query Frame = -3
Query:  233 VFFDMTVGGQPAGRIVMELLPDVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFRRVIPGFMCQXXXXXXXXXXXGESICGSKFADENFVKKHTGPGILSMANAGPGTTGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 730
            VFFD+ V G+P GR+  EL  D  P+TAENFRAL TGEKG G       YKGS F R+IPGFMCQ           G+SI G KF DENF+ KHTGPGILSMANAGP T GSQFF+CT KTEWLDGKHVVFG+V EGM++V+A+E+ GS +G+T+K + IADCGQL
Sbjct:    6 VFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFDDENFILKHTGPGILSMANAGPNTNGSQFFICTVKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164          
BLAST of CF834278 vs. ExPASy Swiss-Prot
Match: PPIA_MOUSE (Peptidyl-prolyl cis-trans isomerase A OS=Mus musculus GN=Ppia PE=1 SV=2)

HSP 1 Score: 216.468 bits (550), Expect = 1.215e-55
Identity = 105/166 (63.25%), Postives = 123/166 (74.10%), Query Frame = -3
Query:  233 VFFDMTVGGQPAGRIVMELLPDVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFRRVIPGFMCQXXXXXXXXXXXGESICGSKFADENFVKKHTGPGILSMANAGPGTTGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 730
            VFFD+T   +P GR+  EL  D  P+TAENFRAL TGEKG G       YKGSSF R+IPGFMCQ           G SI G KF DENF+ KHTGPGILSMANAGP T GSQFF+CTAKTEWLDGKHVVFG+V EGM++V+A+E+ GS +G+T+K + I+DCGQL
Sbjct:    6 VFFDITADDEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSSFHRIIPGFMCQGGDFTRHNGTGGRSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITISDCGQL 164          
BLAST of CF834278 vs. ExPASy Swiss-Prot
Match: PPIA_AOTTR (Peptidyl-prolyl cis-trans isomerase A OS=Aotus trivirgatus GN=PPIA PE=2 SV=3)

HSP 1 Score: 216.468 bits (550), Expect = 1.215e-55
Identity = 105/166 (63.25%), Postives = 123/166 (74.10%), Query Frame = -3
Query:  233 VFFDMTVGGQPAGRIVMELLPDVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFRRVIPGFMCQXXXXXXXXXXXGESICGSKFADENFVKKHTGPGILSMANAGPGTTGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 730
            VFFD+ V G+P GR+  EL  D  P+TAENFRAL TGEKG G       YKGS F R+IPGFMCQ           G+SI G KF DENF+ KHTGPGILSMANAGP T GSQFF+CT KTEWLDGKHVVFG+V EGM++V+A+E+ GS +G+T+K + IADCGQL
Sbjct:    6 VFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFDDENFILKHTGPGILSMANAGPNTNGSQFFICTVKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164          
BLAST of CF834278 vs. ExPASy Swiss-Prot
Match: PPIA_FELCA (Peptidyl-prolyl cis-trans isomerase A OS=Felis catus GN=PPIA PE=2 SV=3)

HSP 1 Score: 215.698 bits (548), Expect = 2.072e-55
Identity = 104/166 (62.65%), Postives = 123/166 (74.10%), Query Frame = -3
Query:  233 VFFDMTVGGQPAGRIVMELLPDVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFRRVIPGFMCQXXXXXXXXXXXGESICGSKFADENFVKKHTGPGILSMANAGPGTTGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 730
            VFFD+ V G+P GR+  +L  D  P+TAENFRAL TGEKG G       YKGS F R+IPGFMCQ           G+SI G KF DENF+ KHTGPGILSMANAGP T GSQFF+CTAKTEWLDGKHVVFG V EGM++V+A+E+ GS +G+T+K + IADCGQ+
Sbjct:    6 VFFDIAVDGEPLGRVSFDLFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFDDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGMVKEGMNIVEAMERFGSRNGKTSKKITIADCGQI 164          
The following BLAST results are available for this feature:
BLAST of CF834278 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 209
Match NameE-valueIdentityDescription
PPIA_GORGO3.196e-5663.86Peptidyl-prolyl cis-trans isomerase A OS=Gorilla g... [more]
PPIA_CERAE3.196e-5663.86Peptidyl-prolyl cis-trans isomerase A OS=Cercopith... [more]
PPIA_CRIGR5.452e-5663.25Peptidyl-prolyl cis-trans isomerase A OS=Cricetulu... [more]
PPI2_SYNY35.452e-5662.28Peptidyl-prolyl cis-trans isomerase slr1251 OS=Syn... [more]
PPIA_PIG7.120e-5663.25Peptidyl-prolyl cis-trans isomerase A OS=Sus scrof... [more]
PPIA_BOVIN7.120e-5663.25Peptidyl-prolyl cis-trans isomerase A OS=Bos tauru... [more]
PPIA_SAGOE1.215e-5563.25Peptidyl-prolyl cis-trans isomerase A OS=Saguinus ... [more]
PPIA_MOUSE1.215e-5563.25Peptidyl-prolyl cis-trans isomerase A OS=Mus muscu... [more]
PPIA_AOTTR1.215e-5563.25Peptidyl-prolyl cis-trans isomerase A OS=Aotus tri... [more]
PPIA_FELCA2.072e-5562.65Peptidyl-prolyl cis-trans isomerase A OS=Felis cat... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05E01_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05E01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834278 ID=CF834278; Name=CF834278; organism=Citrus sinensis; type=EST; length=735bp
TTTTTTTTTTTTTTATTTAAAAGGCAGCTCATAGAAAGACATCAAAAACA
GGTCATCAAGAACCACCACCGGAGACCCGATCCAACCCGAACAAGTAACA
TAGCAGGAAAATTAGATAAAGATTAAAAGTCCTACAGACACGGCCACATA
GTAATAGATAACATAATCACCATCACGATCGCGATCAGACGGCTCGTGAT
GATGGCGATCATTATCATGATCAAATCTAAGACAATTGACCGCAATCAGC
GATCACGACGGGCTTGTTGGTCCTTCCGGAGCTGGACCCCACTTTCTCGA
TGGCCTTGACGACGTCCATTCCTTCGACGACTTGACCGAACACAACGTGC
TTCCCATCGAGCCACTCGGTCTTGGCCGTACAGACGAAGAACTGAGATCC
GGTGGTTCCGGGTCCGGCATTCGCCATGGAGAGGATTCCGGGGCCGGTGT
GCTTCTTCACGAAGTTCTCATCGGCGAATTTTGAGCCGCAGATTGATTCG
CCTCCGGTGCCGTTTCCGGCGGTGAAGTCTCCCCCCTGGCACATGAATCC
GGGGATCACACGGCGGAAGGACGAGCCCTTGTAGTGGAGGGGCTTGCCGG
ACTTGCCGATGCCTTTCTCGCCGGTGCAGAGGGCGCGGAAGTTCTCGGCG
GTTCGGGGGGTGACATCGGGGAGGAGCTCCATCACGATCCTGCCGGCGGG
CTGACCGCCGACGGTCATGTCAAAGAACACTTTGG
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