CF834278

Overview
NameCF834278
Unique NameCF834278
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length735
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834278 vs. ExPASy Swiss-Prot
Match: PPIE_SCHJA (Peptidyl-prolyl cis-trans isomerase E (Fragment) OS=Schistosoma japonicum PE=2 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.438e-48
Identity = 95/167 (56.89%), Postives = 115/167 (68.86%), Query Frame = -3
Query:  233 KVFFDMTVGGQPAGRIVMELLPDVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFRRVIPGFMCQXXXXXXXXXXXGESICGSKFADENFVKKHTGPGILSMANAGPGTTGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 733
            +VFFD+ +G    GRIVMEL  D+ PRTAENFRALCTG++G G       Y    F RVIP FMCQ           G+SI G KF DENF  +H G G+LSMAN+GP T GSQFF+CT K +WLDGKHVVFG+VV+G +VVK +E VGS SG+  +PV I+ CG+L
Sbjct:   19 RVFFDIRIGNADRGRIVMELRSDIVPRTAENFRALCTGDRGFG-------YHNCCFHRVIPQFMCQGGDFVKGDGTGGKSIYGRKFDDENFQLRHEGFGVLSMANSGPNTNGSQFFICTTKCDWLDGKHVVFGRVVDGQNVVKKMESVGSKSGKVKEPVTISRCGEL 178          
BLAST of CF834278 vs. ExPASy Swiss-Prot
Match: PPIE_MOUSE (Peptidyl-prolyl cis-trans isomerase E OS=Mus musculus GN=Ppie PE=2 SV=2)

HSP 1 Score: 192.971 bits (489), Expect = 1.438e-48
Identity = 95/166 (57.23%), Postives = 116/166 (69.88%), Query Frame = -3
Query:  236 KVFFDMTVGGQPAGRIVMELLPDVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFRRVIPGFMCQXXXXXXXXXXXGESICGSKFADENFVKKHTGPGILSMANAGPGTTGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQ 733
            +V+ D+ +G +PAGRI M L  DV P TAENFR LCT EKG G       +KGSSF R+IP FMCQ           G+SI G KF DENF+ KHTGPG+LSMAN+GP T GSQFF+   KT+WLDGKHVVFG+V EG+DV++ IE  GS  G+  + V+IADCG+
Sbjct:  141 QVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEKGFG-------FKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEAQGSKDGKPKQKVMIADCGE 299          
BLAST of CF834278 vs. ExPASy Swiss-Prot
Match: PPID_EMENI (Peptidyl-prolyl cis-trans isomerase D OS=Emericella nidulans GN=cpr6 PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.438e-48
Identity = 96/168 (57.14%), Postives = 115/168 (68.45%), Query Frame = -3
Query:  230 KVFFDMTVGGQPAGRIVMELLPDVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFRRVIPGFMCQXXXXXXXXXXXGESICGSKFADENFVKKHTGPGILSMANAGPGTTGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 733
            +VFFD+ +G Q  GRI  EL  DV P+TAENFRALCTGEKG+GK GKPLH+KGS F RVI  FM Q           GESI G KF DENF  KH  P +LSMAN+GPGT GSQFF+ T  T  LDGKHVVFG+V+ G  VV+ IE + + + +    V IA+CG+L+
Sbjct:    8 RVFFDIQIGQQQTGRIAFELFNDVVPKTAENFRALCTGEKGMGKQGKPLHFKGSIFHRVIKQFMIQGGDFTAFNGTGGESIYGEKFPDENFELKHDRPFLLSMANSGPGTNGSQFFITTVPTPHLDGKHVVFGEVINGKSVVRKIENMPTQADKPTTDVTIAECGELT 175          
BLAST of CF834278 vs. ExPASy Swiss-Prot
Match: PAL4B_HUMAN (Peptidylprolyl cis-trans isomerase A-like 4B OS=Homo sapiens GN=PPIAL4B PE=1 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.438e-48
Identity = 95/165 (57.58%), Postives = 115/165 (69.70%), Query Frame = -3
Query:  236 VFFDMTVGGQPAGRIVMELLPDVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFRRVIPGFMCQXXXXXXXXXXXGESICGSKFADENFVKKHTGPGILSMANAGPGTTGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQ 730
            VFFD+TV G+P GRI ++L  D   +TAENFRAL TGEKG         YKGS F R+IPGFMCQ            +SI G KF DEN ++KHTG GILSMANAGP T GSQFF+C AKTEWLDGKHV FG+V E +++V+A+E  G  + +T+K + IADCGQ
Sbjct:    6 VFFDITVDGKPLGRISIKLFADKILKTAENFRALSTGEKGF-------RYKGSCFHRIIPGFMCQGGDFTRHNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTEWLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQ 163          
BLAST of CF834278 vs. ExPASy Swiss-Prot
Match: PPIA_CANAL (Peptidyl-prolyl cis-trans isomerase OS=Candida albicans GN=CYP1 PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.878e-48
Identity = 97/166 (58.43%), Postives = 115/166 (69.28%), Query Frame = -3
Query:  233 VFFDMTVGGQPAGRIVMELLPDVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFRRVIPGFMCQXXXXXXXXXXXGESICGSKFADENFVKKHTGPGILSMANAGPGTTGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 730
            V+FD++  GQ  G+I  +L  DV P+TAENFRALCTGEKG G       YKGS F RVIP FM Q           G+SI G+KFADENFVK+H  PG+LSMANAGP T GSQFF+ T    WLDGKHVVFG+V +G+D+VK IE  GS SG T+K +VI + GQL
Sbjct:    4 VYFDVSADGQKLGKITFKLYDDVVPKTAENFRALCTGEKGFG-------YKGSIFHRVIPQFMLQGGDFTNFNGTGGKSIYGTKFADENFVKRHDRPGLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGEVTDGLDIVKKIESFGSGSGATSKKIVIEESGQL 162          
BLAST of CF834278 vs. ExPASy Swiss-Prot
Match: PPID_GIBZE (Peptidyl-prolyl cis-trans isomerase D OS=Gibberella zeae GN=CPR6 PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.453e-48
Identity = 98/169 (57.99%), Postives = 119/169 (70.41%), Query Frame = -3
Query:  230 KVFFDMTVGGQPAGRIVMELLPDVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFRRVIPGFMCQXXXXXXXXXXXGESICGSKFADENFVKKHTGPGILSMANAGPGTTGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSG-RTNKPVVIADCGQLS 733
            +V+FD+++GG+  GRI MEL  D+ P+TA+NFR+LCTGEKGIGKSGKPLHYKGS F RVI  FM Q           GESI G+KF DE F  KH  P +LSMANAGP T GSQFF+ T  T  LDGKHVVFG+V+ G  VV+ IE + + SG R  K  +I DCG+L+
Sbjct:   12 RVYFDISIGGKSVGRITMELYADLVPKTADNFRSLCTGEKGIGKSGKPLHYKGSVFHRVIKQFMIQGGDFTAGDGTGGESIYGNKFDDEAFPIKHEKPFLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGEVLNGKSVVRQIENLTTQSGDRPAKEALIVDCGELT 180          
BLAST of CF834278 vs. ExPASy Swiss-Prot
Match: PPIE_BOVIN (Peptidyl-prolyl cis-trans isomerase E OS=Bos taurus GN=PPIE PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 5.464e-48
Identity = 92/166 (55.42%), Postives = 116/166 (69.88%), Query Frame = -3
Query:  236 KVFFDMTVGGQPAGRIVMELLPDVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFRRVIPGFMCQXXXXXXXXXXXGESICGSKFADENFVKKHTGPGILSMANAGPGTTGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQ 733
            +V+ D+ +G +PAGRI M L  DV P TAENFR LCT EKG G       +KGSSF R+IP FMCQ           G+SI G KF DENF+ KHTGPG+LSMAN+GP T GSQFF+   KT+WLDGKHVVFG++ +G+DV++ IE  GS  G+  + V+I+DCG+
Sbjct:  141 QVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEKGFG-------FKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEITDGLDVLRQIEAQGSKDGKPKQKVIISDCGE 299          
BLAST of CF834278 vs. ExPASy Swiss-Prot
Match: CYPH_SCHPO (Peptidyl-prolyl cis-trans isomerase OS=Schizosaccharomyces pombe GN=ppi1 PE=2 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 9.321e-48
Identity = 97/163 (59.51%), Postives = 109/163 (66.87%), Query Frame = -3
Query:  239 FFDMTVGGQPAGRIVMELLPDVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFRRVIPGFMCQXXXXXXXXXXXGESICGSKFADENFVKKHTGPGILSMANAGPGTTGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCG 727
            FFD+   GQP GRIV +L  DV P+TA NFRALCTGEKG G       Y GS+F RVIP FM Q           G+SI G KF DENF  KH  PG+LSMANAGP T GSQFF+ T  T WLDGKHVVFG+V EGMDVVK +E +GS+SG T   +VI  CG
Sbjct:    5 FFDVIANGQPLGRIVFKLFDDVVPKTAANFRALCTGEKGYG-------YAGSTFHRVIPQFMLQGGDFTRGNGTGGKSIYGEKFPDENFALKHNKPGLLSMANAGPNTNGSQFFITTVVTPWLDGKHVVFGEVTEGMDVVKKVESLGSNSGATRARIVIDKCG 160          
BLAST of CF834278 vs. ExPASy Swiss-Prot
Match: CP20B_ARATH (Peptidyl-prolyl cis-trans isomerase CYP20-2, chloroplastic OS=Arabidopsis thaliana GN=CYP20-2 PE=1 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 4.626e-47
Identity = 101/171 (59.06%), Postives = 117/171 (68.42%), Query Frame = -3
Query:  233 KVFFDMTVG---GQPAGRIVMELLPDVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFRRVIPGFMCQXXXXXXXXXXXGESICGSKFADENFVKKHTGPGILSMANAGPGTTGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSG-RTNKPVVIADCGQL 733
            KV+FD++VG   G+ AGRIV+ L  D  P+T ENFRALCTGEKG G       YKGS+F RVI  FM Q           G+S+ G  F DENF   H GPG+LSMANAGP T GSQFF+CT KT WLDG+HVVFGQV+EGM+VVK IE+  +  G R  K VVIADCGQL
Sbjct:   91 KVYFDISVGNPVGKLAGRIVIGLYGDDVPQTVENFRALCTGEKGFG-------YKGSTFHRVIRDFMIQGGDFEKGNGTGGKSVYGRTFKDENFKLSHVGPGVLSMANAGPNTNGSQFFICTIKTSWLDGRHVVFGQVIEGMEVVKLIEEQETDRGDRPRKKVVIADCGQL 254          
BLAST of CF834278 vs. ExPASy Swiss-Prot
Match: CYPC_YEAST (Peptidyl-prolyl cis-trans isomerase C, mitochondrial OS=Saccharomyces cerevisiae GN=CPR3 PE=1 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 7.890e-47
Identity = 97/167 (58.08%), Postives = 112/167 (67.07%), Query Frame = -3
Query:  233 KVFFDMTVGGQPAGRIVMELLPDVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFRRVIPGFMCQXXXXXXXXXXXGESICGSKFADENFVKKHTGPGILSMANAGPGTTGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 733
            KVFFD  V G   GRI  EL  +V P+TAENFRALCTGEKG G       YKG  F R+IP FM Q           G+SI GSKFADENFVKKH   G+LSMANAGP T GSQFF+ T    WLDGKHVVFG+V +GMD+VKAIE  G++SG+    +VI + G+L
Sbjct:   23 KVFFDPAVNGTKIGRIEFELYDNVVPKTAENFRALCTGEKGWG-------YKGVPFHRIIPDFMIQGGDTDLTNGFGGKSIYGSKFADENFVKKHDKAGLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGEVTKGMDIVKAIESYGTASGKPRAEIVIEEAGEL 182          
The following BLAST results are available for this feature:
BLAST of CF834278 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 209
Match NameE-valueIdentityDescription
PPIE_SCHJA1.438e-4856.89Peptidyl-prolyl cis-trans isomerase E (Fragment) O... [more]
PPIE_MOUSE1.438e-4857.23Peptidyl-prolyl cis-trans isomerase E OS=Mus muscu... [more]
PPID_EMENI1.438e-4857.14Peptidyl-prolyl cis-trans isomerase D OS=Emericell... [more]
PAL4B_HUMAN1.438e-4857.58Peptidylprolyl cis-trans isomerase A-like 4B OS=Ho... [more]
PPIA_CANAL1.878e-4858.43Peptidyl-prolyl cis-trans isomerase OS=Candida alb... [more]
PPID_GIBZE2.453e-4857.99Peptidyl-prolyl cis-trans isomerase D OS=Gibberell... [more]
PPIE_BOVIN5.464e-4855.42Peptidyl-prolyl cis-trans isomerase E OS=Bos tauru... [more]
CYPH_SCHPO9.321e-4859.51Peptidyl-prolyl cis-trans isomerase OS=Schizosacch... [more]
CP20B_ARATH4.626e-4759.06Peptidyl-prolyl cis-trans isomerase CYP20-2, chlor... [more]
CYPC_YEAST7.890e-4758.08Peptidyl-prolyl cis-trans isomerase C, mitochondri... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05E01_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05E01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834278 ID=CF834278; Name=CF834278; organism=Citrus sinensis; type=EST; length=735bp
TTTTTTTTTTTTTTATTTAAAAGGCAGCTCATAGAAAGACATCAAAAACA
GGTCATCAAGAACCACCACCGGAGACCCGATCCAACCCGAACAAGTAACA
TAGCAGGAAAATTAGATAAAGATTAAAAGTCCTACAGACACGGCCACATA
GTAATAGATAACATAATCACCATCACGATCGCGATCAGACGGCTCGTGAT
GATGGCGATCATTATCATGATCAAATCTAAGACAATTGACCGCAATCAGC
GATCACGACGGGCTTGTTGGTCCTTCCGGAGCTGGACCCCACTTTCTCGA
TGGCCTTGACGACGTCCATTCCTTCGACGACTTGACCGAACACAACGTGC
TTCCCATCGAGCCACTCGGTCTTGGCCGTACAGACGAAGAACTGAGATCC
GGTGGTTCCGGGTCCGGCATTCGCCATGGAGAGGATTCCGGGGCCGGTGT
GCTTCTTCACGAAGTTCTCATCGGCGAATTTTGAGCCGCAGATTGATTCG
CCTCCGGTGCCGTTTCCGGCGGTGAAGTCTCCCCCCTGGCACATGAATCC
GGGGATCACACGGCGGAAGGACGAGCCCTTGTAGTGGAGGGGCTTGCCGG
ACTTGCCGATGCCTTTCTCGCCGGTGCAGAGGGCGCGGAAGTTCTCGGCG
GTTCGGGGGGTGACATCGGGGAGGAGCTCCATCACGATCCTGCCGGCGGG
CTGACCGCCGACGGTCATGTCAAAGAACACTTTGG
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