CF834279

Overview
NameCF834279
Unique NameCF834279
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length629
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10954 contig Csv1_Contig10954:41..669. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF834279 vs. ExPASy Swiss-Prot
Match: PPIA_PANPA (Peptidyl-prolyl cis-trans isomerase A OS=Pan paniscus GN=PPIA PE=3 SV=3)

HSP 1 Score: 233.417 bits (594), Expect = 7.224e-61
Identity = 111/171 (64.91%), Postives = 130/171 (76.02%), Query Frame = 3 
Query:   27 MPNPKVFFPLTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVKGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 539
            M NP VFF + V G+P GR+  ELFAD  P+TAENFRAL TGEKG G       YKGS FHR+IPGFMCQ            +SIYG KF DENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKHVVFG+V +GM++V+A+E+ GS +G+T+K + IADCGQL
Sbjct:    1 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164
[Close]
BLAST of CF834279 vs. ExPASy Swiss-Prot
Match: PPIA_MACMU (Peptidyl-prolyl cis-trans isomerase A OS=Macaca mulatta GN=PPIA PE=1 SV=2)

HSP 1 Score: 233.417 bits (594), Expect = 7.224e-61
Identity = 111/171 (64.91%), Postives = 130/171 (76.02%), Query Frame = 3 
Query:   27 MPNPKVFFPLTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVKGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 539
            M NP VFF + V G+P GR+  ELFAD  P+TAENFRAL TGEKG G       YKGS FHR+IPGFMCQ            +SIYG KF DENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKHVVFG+V +GM++V+A+E+ GS +G+T+K + IADCGQL
Sbjct:    1 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164
[Close]
BLAST of CF834279 vs. ExPASy Swiss-Prot
Match: PPIA_HYLSY (Peptidyl-prolyl cis-trans isomerase A OS=Hylobates syndactylus GN=PPIA PE=3 SV=3)

HSP 1 Score: 233.417 bits (594), Expect = 7.224e-61
Identity = 111/171 (64.91%), Postives = 130/171 (76.02%), Query Frame = 3 
Query:   27 MPNPKVFFPLTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVKGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 539
            M NP VFF + V G+P GR+  ELFAD  P+TAENFRAL TGEKG G       YKGS FHR+IPGFMCQ            +SIYG KF DENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKHVVFG+V +GM++V+A+E+ GS +G+T+K + IADCGQL
Sbjct:    1 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164
[Close]
BLAST of CF834279 vs. ExPASy Swiss-Prot
Match: PPIA_HYLLE (Peptidyl-prolyl cis-trans isomerase A OS=Hylobates leucogenys GN=PPIA PE=3 SV=3)

HSP 1 Score: 233.417 bits (594), Expect = 7.224e-61
Identity = 111/171 (64.91%), Postives = 130/171 (76.02%), Query Frame = 3 
Query:   27 MPNPKVFFPLTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVKGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 539
            M NP VFF + V G+P GR+  ELFAD  P+TAENFRAL TGEKG G       YKGS FHR+IPGFMCQ            +SIYG KF DENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKHVVFG+V +GM++V+A+E+ GS +G+T+K + IADCGQL
Sbjct:    1 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164
[Close]
BLAST of CF834279 vs. ExPASy Swiss-Prot
Match: PPIA_HYLLA (Peptidyl-prolyl cis-trans isomerase A OS=Hylobates lar GN=PPIA PE=3 SV=3)

HSP 1 Score: 233.417 bits (594), Expect = 7.224e-61
Identity = 111/171 (64.91%), Postives = 130/171 (76.02%), Query Frame = 3 
Query:   27 MPNPKVFFPLTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVKGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 539
            M NP VFF + V G+P GR+  ELFAD  P+TAENFRAL TGEKG G       YKGS FHR+IPGFMCQ            +SIYG KF DENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKHVVFG+V +GM++V+A+E+ GS +G+T+K + IADCGQL
Sbjct:    1 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164
[Close]
BLAST of CF834279 vs. ExPASy Swiss-Prot
Match: PPIA_HUMAN (Peptidyl-prolyl cis-trans isomerase A OS=Homo sapiens GN=PPIA PE=1 SV=2)

HSP 1 Score: 233.417 bits (594), Expect = 7.224e-61
Identity = 111/171 (64.91%), Postives = 130/171 (76.02%), Query Frame = 3 
Query:   27 MPNPKVFFPLTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVKGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 539
            M NP VFF + V G+P GR+  ELFAD  P+TAENFRAL TGEKG G       YKGS FHR+IPGFMCQ            +SIYG KF DENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKHVVFG+V +GM++V+A+E+ GS +G+T+K + IADCGQL
Sbjct:    1 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164
[Close]
BLAST of CF834279 vs. ExPASy Swiss-Prot
Match: PPIA_GORGO (Peptidyl-prolyl cis-trans isomerase A OS=Gorilla gorilla gorilla GN=PPIA PE=3 SV=3)

HSP 1 Score: 233.417 bits (594), Expect = 7.224e-61
Identity = 111/171 (64.91%), Postives = 130/171 (76.02%), Query Frame = 3 
Query:   27 MPNPKVFFPLTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVKGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 539
            M NP VFF + V G+P GR+  ELFAD  P+TAENFRAL TGEKG G       YKGS FHR+IPGFMCQ            +SIYG KF DENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKHVVFG+V +GM++V+A+E+ GS +G+T+K + IADCGQL
Sbjct:    1 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164
[Close]
BLAST of CF834279 vs. ExPASy Swiss-Prot
Match: PPIA_CERAE (Peptidyl-prolyl cis-trans isomerase A OS=Cercopithecus aethiops GN=PPIA PE=2 SV=2)

HSP 1 Score: 233.417 bits (594), Expect = 7.224e-61
Identity = 111/171 (64.91%), Postives = 130/171 (76.02%), Query Frame = 3 
Query:   27 MPNPKVFFPLTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVKGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 539
            M NP VFF + V G+P GR+  ELFAD  P+TAENFRAL TGEKG G       YKGS FHR+IPGFMCQ            +SIYG KF DENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKHVVFG+V +GM++V+A+E+ GS +G+T+K + IADCGQL
Sbjct:    1 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164
[Close]
BLAST of CF834279 vs. ExPASy Swiss-Prot
Match: PPIA_CRIGR (Peptidyl-prolyl cis-trans isomerase A OS=Cricetulus griseus GN=PPIA PE=2 SV=2)

HSP 1 Score: 232.646 bits (592), Expect = 1.232e-60
Identity = 110/171 (64.33%), Postives = 130/171 (76.02%), Query Frame = 3 
Query:   27 MPNPKVFFPLTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVKGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 539
            M NP VFF ++  G+P GR+  ELFAD  P+TAENFRAL TGEKG G       YKGSSFHR+IPGFMCQ             SIYG KF DENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKHVVFG+V +GM++V+A+E+ GS +G+T+K + I+DCGQL
Sbjct:    1 MVNPTVFFDISADGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSSFHRIIPGFMCQGGDFTRHNGTGGRSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITISDCGQL 164
[Close]
BLAST of CF834279 vs. ExPASy Swiss-Prot
Match: PPIA_PIG (Peptidyl-prolyl cis-trans isomerase A OS=Sus scrofa GN=PPIA PE=1 SV=2)

HSP 1 Score: 232.261 bits (591), Expect = 1.609e-60
Identity = 110/171 (64.33%), Postives = 130/171 (76.02%), Query Frame = 3 
Query:   27 MPNPKVFFPLTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVKGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 539
            M NP VFF + V G+P GR+  ELFAD  P+TAENFRAL TGEKG G       YKGS FHR+IPGFMCQ            +SIYG KF DENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKHVVFG+V +GM++V+A+E+ GS +G+T+K + IADCGQ+
Sbjct:    1 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFDDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQI 164
The following BLAST results are available for this feature:
BLAST of CF834279 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 232
Match NameE-valueIdentityDescription
PPIA_PANPA7.224e-6164.91Peptidyl-prolyl cis-trans isomerase A OS=Pan panis... [more]
PPIA_MACMU7.224e-6164.91Peptidyl-prolyl cis-trans isomerase A OS=Macaca mu... [more]
PPIA_HYLSY7.224e-6164.91Peptidyl-prolyl cis-trans isomerase A OS=Hylobates... [more]
PPIA_HYLLE7.224e-6164.91Peptidyl-prolyl cis-trans isomerase A OS=Hylobates... [more]
PPIA_HYLLA7.224e-6164.91Peptidyl-prolyl cis-trans isomerase A OS=Hylobates... [more]
PPIA_HUMAN7.224e-6164.91Peptidyl-prolyl cis-trans isomerase A OS=Homo sapi... [more]
PPIA_GORGO7.224e-6164.91Peptidyl-prolyl cis-trans isomerase A OS=Gorilla g... [more]
PPIA_CERAE7.224e-6164.91Peptidyl-prolyl cis-trans isomerase A OS=Cercopith... [more]
PPIA_CRIGR1.232e-6064.33Peptidyl-prolyl cis-trans isomerase A OS=Cricetulu... [more]
PPIA_PIG1.609e-6064.33Peptidyl-prolyl cis-trans isomerase A OS=Sus scrof... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05E01_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05E01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834279 ID=CF834279; Name=CF834279; organism=Citrus sinensis; type=EST; length=629bp
TTTTTCTCTCCCATAAAGGACCAAAAATGCCAAACCCCAAAGTGTTCTTC
CCCTTGACCGTCGGCGGTCAACCCGCCGGCAGGATCGTGATGGAGCTCTT
CGCCGATGTCACCCCCCGAACCGCCGAGAACTTCCGCGCCCTCTGCACCG
GCGAGAAAGGCATCGGCAAGTCCGGCAAGCCACTCCACTACAAGGGCTCG
TCCTTCCACCGTGTGATCCCCGGATTCATGTGCCAGGGGGGAGACTTCAC
CGCCGGAAACGGAACCGGAGGCGAATCAATCTACGGCTCAAAATTCGCCG
ATGAGAACTTCGTGAAGAAGCACACCGGCCCCGGAATCCTCTCCATGGCG
AATGCCGGACCCGGAACCAACGGATCTCAGTTCTTCGTCTGTACGGCCAA
GACCGAGTGGCTCGATGGGAAGCACGTTGTGTTCGGTCAAGTCGTCAAAG
GAATGGACGTCGTCAAGGCCATCGAGAAAGTGGGGTCCAGCTCCGGAAGG
ACCAACAAGCCCGTCGTGATCGCTGATTGCGGTCAATTGTCTTAGATTTG
ATCATGATAATGATCGCCATCATCACGAGCCGTCTGATCGCGATCGTGAT
GGTGATTATGTTATCTATTATTATGTGGC
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