CF834280

Overview
NameCF834280
Unique NameCF834280
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length745
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834280 vs. ExPASy Swiss-Prot
Match: PPIB_HUMAN (Peptidyl-prolyl cis-trans isomerase B OS=Homo sapiens GN=PPIB PE=1 SV=2)

HSP 1 Score: 173.711 bits (439), Expect = 9.236e-43
Identity = 88/168 (52.38%), Postives = 110/168 (65.48%), Query Frame = -3
Query:  216 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSS-GRTNKPVVIADCGQL 716
            KV+FD+ +G +  GR++  LF    P+T +NF AL TGEKG G       YK S FHRVI  FM Q           G+SIYG +F DENF  KH GPG +SMANAG  TNGSQFF+ T KT WLDGKHVVFG+V+EGM+VV+ +E   + S  +  K V+IADCG++
Sbjct:   45 KVYFDLRIGDEDVGRVIFGLFGKTVPKTVDNFVALATGEKGFG-------YKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVESTKTDSRDKPLKDVIIADCGKI 205          
BLAST of CF834280 vs. ExPASy Swiss-Prot
Match: PPIB_YARLI (Peptidyl-prolyl cis-trans isomerase B OS=Yarrowia lipolytica GN=CPR2 PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.206e-42
Identity = 93/168 (55.36%), Postives = 108/168 (64.29%), Query Frame = -3
Query:  216 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNK-PVVIADCGQL 716
            KV+FD+  G +  G+IVM L+ DV P+T ENFRALCTGE G G       YKGS FHRVI  FM Q           GESIYG KF DENF  KHT P  LSMANAG  TNGSQFF+ T  T WLDGKHVVFG+V+EG D+V AIE   + +    K  + IAD G++
Sbjct:   33 KVYFDIKQGEESLGKIVMGLYGDVVPKTVENFRALCTGETGKG-------YKGSKFHRVIKNFMIQGGDFTRGDGTGGESIYGRKFPDENFQLKHTKPYKLSMANAGRDTNGSQFFITTVVTSWLDGKHVVFGEVLEGQDIVDAIENAPTGARSNPKVDITIADAGEI 193          
BLAST of CF834280 vs. ExPASy Swiss-Prot
Match: PPIB_BOVIN (Peptidyl-prolyl cis-trans isomerase B OS=Bos taurus GN=PPIB PE=1 SV=4)

HSP 1 Score: 173.326 bits (438), Expect = 1.206e-42
Identity = 91/169 (53.85%), Postives = 110/169 (65.09%), Query Frame = -3
Query:  216 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTN--KPVVIADCGQL 716
            KV+FD+ +G +  GR+V+ LF    P+T +NF AL TGEKG G       YK S FHRVI  FM Q           G+SIYG +F DENF  KH GPG +SMANAG  TNGSQFF+ T KT WLDGKHVVFG+V+EGMDVV+ +E    + GR    K V IADCG++
Sbjct:   45 KVYFDLRIGDEDIGRVVIGLFGKTVPKTVDNFVALATGEKGFG-------YKDSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMDVVRKVEST-KTDGRDKPLKDVTIADCGKI 205          
BLAST of CF834280 vs. ExPASy Swiss-Prot
Match: PPIB1_RHIOR (Peptidyl-prolyl cis-trans isomerase B1 OS=Rhizopus oryzae GN=cyp8 PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.206e-42
Identity = 93/170 (54.71%), Postives = 114/170 (67.06%), Query Frame = -3
Query:  216 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKP---VVIADCGQL 716
            K++FD+  G +  GRIV+ L+    P+TAENF+ L TGE G G       YKGS+FHRVI  FM Q           G+SIYG++FADENF  +H+ PG+LSMANAG  TNGSQFF+ T  T WLDGKHVVFG+V+EGMDVV  IE   + +G  +KP   VVIADCG L
Sbjct:   35 KIYFDIKQGDESLGRIVLGLYGKTVPKTAENFKQLATGENGYG-------YKGSTFHRVIKKFMIQGGDFTNHDGTGGKSIYGNRFADENFKLRHSTPGLLSMANAGRDTNGSQFFITTVVTPWLDGKHVVFGRVLEGMDVVTKIE--NTPTGSRSKPSVDVVIADCGLL 195          
BLAST of CF834280 vs. ExPASy Swiss-Prot
Match: PPIB_GIBZE (Peptidyl-prolyl cis-trans isomerase B OS=Gibberella zeae GN=CPR2 PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 5.987e-42
Identity = 91/170 (53.53%), Postives = 111/170 (65.29%), Query Frame = -3
Query:  216 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKP---VVIADCGQL 716
            KV+FD+T G QP GR+VM L+    P T ENFRAL TGEKG G       Y+GS+FHRVI  FM Q           G+SIYG +F DENF  KHT  G+LSMANAG  TNGSQFF+ T  T WLDGKHVVFG+V+EG ++++ IE   S +G  ++P   V IA  G+L
Sbjct:   36 KVYFDITQGDQPLGRVVMGLYGKTVPETTENFRALATGEKGFG-------YEGSAFHRVIKNFMIQGGDFTKGDGTGGKSIYGDRFKDENFKLKHTKKGLLSMANAGRDTNGSQFFITTVVTSWLDGKHVVFGEVLEGYEIIEKIE--NSKTGAADRPVEAVKIAKSGEL 196          
BLAST of CF834280 vs. ExPASy Swiss-Prot
Match: PPIB_MOUSE (Peptidyl-prolyl cis-trans isomerase B OS=Mus musculus GN=Ppib PE=2 SV=2)

HSP 1 Score: 170.629 bits (431), Expect = 7.819e-42
Identity = 88/168 (52.38%), Postives = 108/168 (64.29%), Query Frame = -3
Query:  216 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSS-GRTNKPVVIADCGQL 716
            KV+FD+ +G +  GR+V  LF    P+T +NF AL TGEKG G       YK S FHRVI  FM Q           G+SIYG +F DENF  KH GPG +SMANAG  TNGSQFF+ T KT WLDGKHVVFG+V+EGMDVV+ +E   + S  +  K V+I D G++
Sbjct:   45 KVYFDLQIGDESVGRVVFGLFGKTVPKTVDNFVALATGEKGFG-------YKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTSWLDGKHVVFGKVLEGMDVVRKVESTKTDSRDKPLKDVIIVDSGKI 205          
BLAST of CF834280 vs. ExPASy Swiss-Prot
Match: PPIB_ASPNG (Peptidyl-prolyl cis-trans isomerase B OS=Aspergillus niger GN=cypB PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 7.819e-42
Identity = 88/159 (55.35%), Postives = 108/159 (67.92%), Query Frame = -3
Query:  240 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPV 716
            KVFFD+  G +P GR+V+ L+    P+TAENFRAL TGEKG G       Y+GS+FHRVI  FM Q           G+SIYG KFADENF  +HT  G+LSMANAG  TNGSQFF+ T  T WLDG+HVVFG+V+EG ++V  IE V    GR+++PV
Sbjct:   36 KVFFDIEHGDKPLGRVVLGLYGKTVPKTAENFRALATGEKGFG-------YEGSTFHRVIKDFMIQGGDFTRGDGTGGKSIYGEKFADENFKLRHTRKGLLSMANAGKDTNGSQFFITTVPTPWLDGRHVVFGEVLEGYEIVAQIENV--PKGRSDRPV 185          
BLAST of CF834280 vs. ExPASy Swiss-Prot
Match: PPIB_ASPFU (Peptidyl-prolyl cis-trans isomerase B OS=Aspergillus fumigatus GN=cpr2 PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 7.819e-42
Identity = 91/168 (54.17%), Postives = 110/168 (65.48%), Query Frame = -3
Query:  216 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSG-RTNKPVVIADCGQL 716
            KVFFD+  G +P GRIV+ L+    P+TAENFRAL TGEKG G       Y+GS+FHRVI  FM Q           G+SIYG KFADENF  +HT  G+LSMANAG  TNGSQFF+ T  T WLDG+HVVFG+V+EG +VV+ IE V    G +  + V I   GQ+
Sbjct:   37 KVFFDIEHGDKPLGRIVLGLYGKTVPKTAENFRALATGEKGFG-------YEGSTFHRVIKSFMIQGGDFTRGDGTGGKSIYGEKFADENFKLRHTRKGLLSMANAGKDTNGSQFFITTVPTPWLDGRHVVFGEVLEGYEVVEQIENVPKGPGDKPAETVKIVKSGQI 197          
BLAST of CF834280 vs. ExPASy Swiss-Prot
Match: PPIH_RHIOR (Peptidyl-prolyl cis-trans isomerase H OS=Rhizopus oryzae GN=cyp7 PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.334e-41
Identity = 86/175 (49.14%), Postives = 116/175 (66.29%), Query Frame = -3
Query:  216 SKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGS-KFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSS-SGRTNKPVVIADCGQL 734
            +++  P VFFD+++G  P GR+ MELF+D+ PRTAENFR LCTGE    ++G P  YK   FHRVI  FM Q              IYG  +FADENF++KHTG G+LSMAN+GP +NG QFF+     ++LDGKHVVFG++V+G+  ++ IE V +  + R   PV I +CGQ+
Sbjct:    6 NQVERPVVFFDISIGDVPVGRMKMELFSDIVPRTAENFRQLCTGE--YKRNGVPQGYKNCLFHRVIKDFMVQGGDFIKGDGTGAMCIYGGDRFADENFIEKHTGAGLLSMANSGPNSNGCQFFITCDACDFLDGKHVVFGRLVDGLLTLRKIENVATGPNNRPKLPVKITECGQM 178          
BLAST of CF834280 vs. ExPASy Swiss-Prot
Match: PPID_USTMA (Peptidyl-prolyl cis-trans isomerase D OS=Ustilago maydis GN=CPR6 PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.334e-41
Identity = 91/179 (50.84%), Postives = 113/179 (63.13%), Query Frame = -3
Query:  213 KMPNPKVFFDMTVGGQPAGR-----IVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGS-SSGRTNKPVVIADCGQLS 731
            K  NP V+ D+  G  PA R     IV+EL+AD  PRTAENFR LCT    +  +G+PL ++ S FHRVIP FM Q           GESIYG KF DE+   KH  P +LSMANAG  TNGSQFF+ T  T  LDGKHVVFG+V++G  VV+ +E V + +S R  + V I DCG+L+
Sbjct:    9 KPGNPIVYLDLAFGSSPASRPGSNRIVLELYADRVPRTAENFRVLCTNTSKLASTGQPLSFRNSIFHRVIPKFMIQGGDFTRADGTGGESIYGEKFQDEDLTGKHDVPFLLSMANAGANTNGSQFFITTVPTPHLDGKHVVFGRVLKGKGVVRRVESVETVASDRPKEDVKIVDCGELT 187          
The following BLAST results are available for this feature:
BLAST of CF834280 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 232
Match NameE-valueIdentityDescription
PPIB_HUMAN9.236e-4352.38Peptidyl-prolyl cis-trans isomerase B OS=Homo sapi... [more]
PPIB_YARLI1.206e-4255.36Peptidyl-prolyl cis-trans isomerase B OS=Yarrowia ... [more]
PPIB_BOVIN1.206e-4253.85Peptidyl-prolyl cis-trans isomerase B OS=Bos tauru... [more]
PPIB1_RHIOR1.206e-4254.71Peptidyl-prolyl cis-trans isomerase B1 OS=Rhizopus... [more]
PPIB_GIBZE5.987e-4253.53Peptidyl-prolyl cis-trans isomerase B OS=Gibberell... [more]
PPIB_MOUSE7.819e-4252.38Peptidyl-prolyl cis-trans isomerase B OS=Mus muscu... [more]
PPIB_ASPNG7.819e-4255.35Peptidyl-prolyl cis-trans isomerase B OS=Aspergill... [more]
PPIB_ASPFU7.819e-4254.17Peptidyl-prolyl cis-trans isomerase B OS=Aspergill... [more]
PPIH_RHIOR1.334e-4149.14Peptidyl-prolyl cis-trans isomerase H OS=Rhizopus ... [more]
PPID_USTMA1.334e-4150.84Peptidyl-prolyl cis-trans isomerase D OS=Ustilago ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05E02_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834280 ID=CF834280; Name=CF834280; organism=Citrus sinensis; type=EST; length=745bp
AAAAAGGCAGCTCATAGAAAGACAACCCTAATAGGTCATCAAGAACCACC
ACCGGAGACCCGATCCCCCTTGAACAAGTAACATAGCAGGAAAATTAGAT
AAAGATTAAAAGTCCTACAGACACGGCCACATAATAATAGATAACATAAT
CACCATCACGATCGCGATCAGACGGCTCGTGATGATGGCGATCATTATCA
TGATCAAATCTAAGACAATTGACCGCAATCAGCGATCACGACGGGCTTGT
TGGTCCTTCCGGAGCTGGACCCCACTTTCTCGATGGCCTTGACGACGTCC
ATTCCTTCGACGACTTGACCGAACACAACGTGCTTCCCATCGAGCCACTC
GGTCTTGGCCGTACAGACGAAGAACTGAGATCCGTTGGTTCCGGGTCCGG
CATTCGCCATGGAGAGGATTCCGGGGCCGGTGTGCTTCTTCACGAAGTTC
TCATCGGCGAATTTTGAGCCGTAGATTGATTCGCCTCCGGTTCCGTTTCC
GGCGGTGAAGTCTCCCCCCTGGCACATGAATCCGGGGATCACACGGTGGA
AGGACGAGCCCTTGTAGTGGAGTGGCTTGCCGGACTTGCCGATGCCTTTC
TCGCCGGTGCAGAGGGCGCGGAAGTTCTCGGCGGTTCGGGGGGTGACATC
GGCGAAGAGCTCCATCACGATCCTGCCGGCGGGCTGACCGCCGACGGTCA
TGTCGAAGAACACTTTGGGGTTTGGCATTTTTGATTGGTTGATTG
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