CF834281

Overview
NameCF834281
Unique NameCF834281
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length773
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10954 contig Csv1_Contig10954:40..811. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834281 vs. ExPASy Swiss-Prot
Match: CYP3_CAEEL (Peptidyl-prolyl cis-trans isomerase 3 OS=Caenorhabditis elegans GN=cyn-3 PE=1 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 7.467e-67
Identity = 120/171 (70.18%), Postives = 136/171 (79.53%), Query Frame = 1
Query:   28 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 540
            M   KVFFD+T+GG+ +GRIVMEL+ DV P+TA NFRALCTGE GIGKSGKPLH+KGS FHR+IP FM Q            ESIYG KF DENF +KHTGPG+LSMANAGP TNGSQFF+CT KTEWLDGKHVVFG+VVEG+DVVKA+E  GS SG+  K  +IADCGQL
Sbjct:    1 MSRSKVFFDITIGGKASGRIVMELYDDVVPKTAGNFRALCTGENGIGKSGKPLHFKGSKFHRIIPNFMIQGGDFTRGNGTGGESIYGEKFPDENFKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTEWLDGKHVVFGRVVEGLDVVKAVESNGSQSGKPVKDCMIADCGQL 171          
BLAST of CF834281 vs. ExPASy Swiss-Prot
Match: CYP7_CAEEL (Peptidyl-prolyl cis-trans isomerase 7 OS=Caenorhabditis elegans GN=cyn-7 PE=1 SV=2)

HSP 1 Score: 251.521 bits (641), Expect = 3.706e-66
Identity = 116/171 (67.84%), Postives = 134/171 (78.36%), Query Frame = 1
Query:   28 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 540
            M  P+VFFD+T+ G+P GRIVMEL+ D+ P+TAENFRALCTGEKG+GKSGKPLH+KGS FHR+IP FM Q            ESIYG KF DENF +KHTGPG+LSMANAGP TNGSQFF+CT KT WLDGKHVVFG+VVEG+D+V  +E  GSSSG      +IADCGQL
Sbjct:    1 MSRPRVFFDITIAGKPTGRIVMELYNDIVPKTAENFRALCTGEKGVGKSGKPLHFKGSKFHRIIPEFMIQGGDFTRGNGTGGESIYGEKFPDENFKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTAWLDGKHVVFGRVVEGLDIVSKVEGNGSSSGTPKSECLIADCGQL 171          
BLAST of CF834281 vs. ExPASy Swiss-Prot
Match: PPIA_DICDI (Peptidyl-prolyl cis-trans isomerase A OS=Dictyostelium discoideum GN=ppiA PE=1 SV=1)

HSP 1 Score: 250.751 bits (639), Expect = 6.321e-66
Identity = 120/169 (71.01%), Postives = 134/169 (79.29%), Query Frame = 1
Query:   34 NPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 540
            NP+VFFD+T+GG  AG++VMEL+A+  P+TAENFRALCTGEKGIGKSGKPL YKGSSFHRVI  FMCQ            ESIYG+KFADENF  KH G G LSMANAG  TNGSQFF+C A T+WLDGKHVVFG V EGMDVVK +E  GS SG+T KPVVIA+CGQL
Sbjct:   11 NPRVFFDITIGGVEAGKVVMELYANTVPKTAENFRALCTGEKGIGKSGKPLSYKGSSFHRVITNFMCQGGDFTMGNGTGGESIYGNKFADENFKLKHFGQGTLSMANAGANTNGSQFFICVAPTDWLDGKHVVFGFVTEGMDVVKKMEAAGSQSGKTTKPVVIANCGQL 179          
BLAST of CF834281 vs. ExPASy Swiss-Prot
Match: CYPH_ALLCE (Peptidyl-prolyl cis-trans isomerase OS=Allium cepa GN=CYP PE=2 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 2.402e-65
Identity = 120/151 (79.47%), Postives = 128/151 (84.77%), Query Frame = 1
Query:   91 MELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 543
            MELF DV P+TAENFRALCTGEKG+G   KPLHYKGSSFHRVIPGFMCQ            ESIYG+KF DENF+KKHTGPG+LSMANAGPGTNGSQFF+CT KT WLDGKHVVFGQVVEGMDVV+AIEKVGS SG+T KPV IADCGQLS
Sbjct:    1 MELFQDVVPQTAENFRALCTGEKGMGDR-KPLHYKGSSFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFKDENFIKKHTGPGVLSMANAGPGTNGSQFFICTEKTAWLDGKHVVFGQVVEGMDVVRAIEKVGSQSGQTKKPVKIADCGQLS 150          
BLAST of CF834281 vs. ExPASy Swiss-Prot
Match: CYP2_CAEEL (Peptidyl-prolyl cis-trans isomerase 2 OS=Caenorhabditis elegans GN=cyn-2 PE=2 SV=2)

HSP 1 Score: 244.973 bits (624), Expect = 3.468e-64
Identity = 115/171 (67.25%), Postives = 132/171 (77.19%), Query Frame = 1
Query:   28 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 540
            MP  KVFFD+T+GG+  GRIVMEL+ D+ P+TAENFRALCTGEKG GKSGK LH+KGS FHR+IP FM Q            ESI+G KF DENF +KHTGPG+LSMAN G  TNGSQFF+CT KT WLDGKHVVFG+V+EGMDVVKAIE  GS  G  + P VIADCG++
Sbjct:    1 MPRVKVFFDITIGGKKGGRIVMELYNDIVPKTAENFRALCTGEKGKGKSGKKLHFKGSKFHRIIPEFMIQGGDFTEGNGTGGESIHGEKFDDENFKEKHTGPGVLSMANCGANTNGSQFFLCTVKTTWLDGKHVVFGKVIEGMDVVKAIESKGSEDGAPSAPCVIADCGEM 171          
BLAST of CF834281 vs. ExPASy Swiss-Prot
Match: CYP1_CAEEL (Peptidyl-prolyl cis-trans isomerase 1 OS=Caenorhabditis elegans GN=cyn-1 PE=2 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 2.486e-62
Identity = 113/168 (67.26%), Postives = 128/168 (76.19%), Query Frame = 1
Query:   37 PKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 540
            PKVFFD+++G +PAGR+ MELF DV P+TAENFRALCTGEKG+G+ G  LH+KGS FHR+IP FM Q            ESIYG+KF DENF  KHTGPG LSMANAGP TNGSQFF+CT  T WLDG HVVFGQV +GM VVK IEK+GS SG   K V IADCG+L
Sbjct:   22 PKVFFDVSIGEEPAGRVTMELFNDVVPKTAENFRALCTGEKGVGEQGVALHFKGSKFHRIIPEFMIQGGDFTRHNGTGGESIYGNKFKDENFDLKHTGPGCLSMANAGPNTNGSQFFICTVDTPWLDGGHVVFGQVTDGMSVVKKIEKMGSRSGAPAKTVTIADCGEL 189          
BLAST of CF834281 vs. ExPASy Swiss-Prot
Match: PPIA_RAT (Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus GN=Ppia PE=1 SV=2)

HSP 1 Score: 238.424 bits (607), Expect = 3.246e-62
Identity = 113/171 (66.08%), Postives = 131/171 (76.61%), Query Frame = 1
Query:   28 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 540
            M NP VFFD+T  G+P GR+  ELFAD  P+TAENFRAL TGEKG G       YKGSSFHR+IPGFMCQ            +SIYG KF DENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKHVVFG+V EGM +V+A+E+ GS +G+T+K + I+DCGQL
Sbjct:    1 MVNPTVFFDITADGEPLGRVCFELFADKVPKTAENFRALSTGEKGFG-------YKGSSFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMSIVEAMERFGSRNGKTSKKITISDCGQL 164          
BLAST of CF834281 vs. ExPASy Swiss-Prot
Match: PPIA_PONPY (Peptidyl-prolyl cis-trans isomerase A OS=Pongo pygmaeus GN=PPIA PE=2 SV=4)

HSP 1 Score: 237.269 bits (604), Expect = 7.232e-62
Identity = 113/171 (66.08%), Postives = 131/171 (76.61%), Query Frame = 1
Query:   28 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 540
            M NP VFFD+ V G+P GR+  ELFAD  P+TAENFRAL TGEKG G       YKGS FHR+IPGFMCQ            +SIYG KF DENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKHVVFG+V EGM++V+A+E+ GS +G+T+K + IADCGQL
Sbjct:    1 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164          
BLAST of CF834281 vs. ExPASy Swiss-Prot
Match: PPIA_PAPAN (Peptidyl-prolyl cis-trans isomerase A OS=Papio anubis GN=PPIA PE=2 SV=2)

HSP 1 Score: 237.269 bits (604), Expect = 7.232e-62
Identity = 113/171 (66.08%), Postives = 131/171 (76.61%), Query Frame = 1
Query:   28 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 540
            M NP VFFD+ V G+P GR+  ELFAD  P+TAENFRAL TGEKG G       YKGS FHR+IPGFMCQ            +SIYG KF DENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKHVVFG+V EGM++V+A+E+ GS +G+T+K + IADCGQL
Sbjct:    1 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164          
BLAST of CF834281 vs. ExPASy Swiss-Prot
Match: PPIA_PANTR (Peptidyl-prolyl cis-trans isomerase A OS=Pan troglodytes GN=PPIA PE=3 SV=3)

HSP 1 Score: 237.269 bits (604), Expect = 7.232e-62
Identity = 113/171 (66.08%), Postives = 131/171 (76.61%), Query Frame = 1
Query:   28 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 540
            M NP VFFD+ V G+P GR+  ELFAD  P+TAENFRAL TGEKG G       YKGS FHR+IPGFMCQ            +SIYG KF DENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKHVVFG+V EGM++V+A+E+ GS +G+T+K + IADCGQL
Sbjct:    1 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164          
The following BLAST results are available for this feature:
BLAST of CF834281 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 232
Match NameE-valueIdentityDescription
CYP3_CAEEL7.467e-6770.18Peptidyl-prolyl cis-trans isomerase 3 OS=Caenorhab... [more]
CYP7_CAEEL3.706e-6667.84Peptidyl-prolyl cis-trans isomerase 7 OS=Caenorhab... [more]
PPIA_DICDI6.321e-6671.01Peptidyl-prolyl cis-trans isomerase A OS=Dictyoste... [more]
CYPH_ALLCE2.402e-6579.47Peptidyl-prolyl cis-trans isomerase OS=Allium cepa... [more]
CYP2_CAEEL3.468e-6467.25Peptidyl-prolyl cis-trans isomerase 2 OS=Caenorhab... [more]
CYP1_CAEEL2.486e-6267.26Peptidyl-prolyl cis-trans isomerase 1 OS=Caenorhab... [more]
PPIA_RAT3.246e-6266.08Peptidyl-prolyl cis-trans isomerase A OS=Rattus no... [more]
PPIA_PONPY7.232e-6266.08Peptidyl-prolyl cis-trans isomerase A OS=Pongo pyg... [more]
PPIA_PAPAN7.232e-6266.08Peptidyl-prolyl cis-trans isomerase A OS=Papio anu... [more]
PPIA_PANTR7.232e-6266.08Peptidyl-prolyl cis-trans isomerase A OS=Pan trogl... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05E02_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834281 ID=CF834281; Name=CF834281; organism=Citrus sinensis; type=EST; length=773bp
TTTTTTCTCTCCCATTACCAATCAAAAATGCCAAACCCCAAAGTGTTCTT
CGACATGACCGTCGGCGGTCAGCCCGCCGGCAGGATCGTGATGGAGCTCT
TCGCCGATGTCACCCCCCGAACCGCCGAGAACTTCCGCGCCCTCTGCACC
GGCGAGAAAGGCATCGGCAAGTCCGGCAAGCCACTCCACTACAAGGGCTC
GTCCTTCCACCGTGTGATCCCCGGATTCATGTGCCAGGGGGGAGACTTCA
CCGCCGGAAACGGAACCGGAGGCGAATCAATCTACGGCTCAAAATTCGCC
GATGAGAACTTCGTGAAGAAGCACACCGGCCCCGGAATCCTCTCCATGGC
GAATGCCGGACCCGGAACCAACGGATCTCAGTTCTTCGTCTGTACGGCCA
AGACCGAGTGGCTCGATGGGAAGCACGTTGTGTTCGGTCAAGTCGTCGAA
GGAATGGACGTCGTCAAGGCCATCGAGAAAGTGGGGTCCAGCTCCGGAAG
GACCAACAAGCCCGTCGTGATCGCTGATTGCGGTCAATTGTCTTAGATTT
GATCATGATAATGATCGCCATCATCACGAGCCGTCTGATCGCGATCGTGA
TGGTGATTATGTTATCTATTATTATGTGGCCGTGTCTGTAGGACTTTTAA
TCTTTATCTAATTTTCCTGCTATGTTACTTGTTCGGGTTGGATCGGGTCT
CCGGTGGTGGTTCTTGATGAACTGTTTTTTATGTCTTTCTATGAGCTGCC
TTTTTAAATAAAAAAAAAAAAAA
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