CF834281

Overview
NameCF834281
Unique NameCF834281
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length773
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834281 vs. ExPASy Swiss-Prot
Match: PPI1_STAAM (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=SAV0954 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.977e-15
Identity = 59/174 (33.91%), Postives = 78/174 (44.83%), Query Frame = 1
Query:   79 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAK----------------------------TEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPV 516
            G +  +LF ++ P+T ENF           K+G   +Y G +FHRVI  FM Q            ESIYG  F DE  +      G LSMAN+GP TNGSQFF+   K                            T WLD KH VFGQ+++G   ++ I    +  G  +KP+
Sbjct:   25 GDMTFKLFPNIAPKTVENFVTHA-------KNG---YYDGITFHRVINDFMIQGGDPTATGMGG-ESIYGGAFEDEFSLNAFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDI--ANTKVGPQDKPL 185          
BLAST of CF834281 vs. ExPASy Swiss-Prot
Match: PPI1_STAAC (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain COL) GN=SACOL0957 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.977e-15
Identity = 59/174 (33.91%), Postives = 78/174 (44.83%), Query Frame = 1
Query:   79 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAK----------------------------TEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPV 516
            G +  +LF ++ P+T ENF           K+G   +Y G +FHRVI  FM Q            ESIYG  F DE  +      G LSMAN+GP TNGSQFF+   K                            T WLD KH VFGQ+++G   ++ I    +  G  +KP+
Sbjct:   25 GDMTFKLFPNIAPKTVENFVTHA-------KNG---YYDGITFHRVINDFMIQGGDPTATGMGG-ESIYGGAFEDEFSLNAFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLTDGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDI--ANTKVGPQDKPL 185          
BLAST of CF834281 vs. ExPASy Swiss-Prot
Match: PPI1_STAAB (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=SAB0821 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.977e-15
Identity = 59/174 (33.91%), Postives = 78/174 (44.83%), Query Frame = 1
Query:   79 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAK----------------------------TEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPV 516
            G +  +LF ++ P+T ENF           K+G   +Y G +FHRVI  FM Q            ESIYG  F DE  +      G LSMAN+GP TNGSQFF+   K                            T WLD KH VFGQ+++G   ++ I    +  G  +KP+
Sbjct:   25 GDMTFKLFPNIAPKTVENFVTHA-------KNG---YYDGITFHRVINDFMIQGGDPTATGMGG-ESIYGGAFEDEFSLNAFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDI--ANTKVGPQDKPL 185          
BLAST of CF834281 vs. ExPASy Swiss-Prot
Match: PPI1_STAA8 (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain NCTC 8325) GN=SAOUHSC_00891 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.977e-15
Identity = 59/174 (33.91%), Postives = 78/174 (44.83%), Query Frame = 1
Query:   79 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAK----------------------------TEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPV 516
            G +  +LF ++ P+T ENF           K+G   +Y G +FHRVI  FM Q            ESIYG  F DE  +      G LSMAN+GP TNGSQFF+   K                            T WLD KH VFGQ+++G   ++ I    +  G  +KP+
Sbjct:   25 GDMTFKLFPNIAPKTVENFVTHA-------KNG---YYDGITFHRVINDFMIQGGDPTATGMGG-ESIYGGAFEDEFSLNAFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDI--ANTKVGPQDKPL 185          
BLAST of CF834281 vs. ExPASy Swiss-Prot
Match: PPI1_STAA3 (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain USA300) GN=SAUSA300_0857 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.977e-15
Identity = 59/174 (33.91%), Postives = 78/174 (44.83%), Query Frame = 1
Query:   79 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAK----------------------------TEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPV 516
            G +  +LF ++ P+T ENF           K+G   +Y G +FHRVI  FM Q            ESIYG  F DE  +      G LSMAN+GP TNGSQFF+   K                            T WLD KH VFGQ+++G   ++ I    +  G  +KP+
Sbjct:   25 GDMTFKLFPNIAPKTVENFVTHA-------KNG---YYDGITFHRVINDFMIQGGDPTATGMGG-ESIYGGAFEDEFSLNAFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDI--ANTKVGPQDKPL 185          
BLAST of CF834281 vs. ExPASy Swiss-Prot
Match: CYPR_YEAST (Peptidyl-prolyl cis-trans isomerase CPR4 OS=Saccharomyces cerevisiae GN=CPR4 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.078e-15
Identity = 51/145 (35.17%), Postives = 69/145 (47.59%), Query Frame = 1
Query:   46 FFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGI--GKSGKPLH---YKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAK--TEWLDGKHVVFGQVVEGMD 459
            +FD          +  EL+  V P+T  NF  L  G K +  GK    +H   Y+ +  ++V P    Q             ++YG KF DENF  KH  P  L+MA  GP +N S+F + T     E LDGK VVFGQ+  G+D
Sbjct:   55 YFDPVSKSMKEADLTFELYGTVVPKTVNNFAMLAHGVKAVIEGKDPNDIHTYSYRKTKINKVYPNKYIQGGVVAPDVGPF--TVYGPKFDDENFYLKHDRPERLAMAYFGPDSNTSEFIITTKADGNEELDGKSVVFGQITSGLD 197          
BLAST of CF834281 vs. ExPASy Swiss-Prot
Match: PPIL3_USTMA (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Ustilago maydis GN=CYP10 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.292e-14
Identity = 50/128 (39.06%), Postives = 64/128 (50.00%), Query Frame = 1
Query:   79 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMD 459
            G I +E+F D TPR AENF   C              Y    +HR I  FM Q            +SI+G  FADE     K    GI++ ANAGP TN SQFF+  AK   LDGK+ + G+V++G +
Sbjct:   10 GDIKVEVFCDATPRAAENFLGHCAAGT----------YNDVKWHRNIKSFMIQTGDPTGTGKGG-QSIWGKPFADEIRSSLKFDRRGIVACANAGPDTNKSQFFITYAKQPHLDGKYTIIGKVIDGAE 126          
BLAST of CF834281 vs. ExPASy Swiss-Prot
Match: SDC10_MOUSE (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Mus musculus GN=Sdccag10 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.615e-14
Identity = 51/145 (35.17%), Postives = 71/145 (48.97%), Query Frame = 1
Query:   13 HYQSKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQV 444
            + Q    N KV    T     AG I +EL++   P+   NF  LC             +Y  + FHRV+PGF+ Q            ESIYG+ F DE   + +    G+++MANAGP  NGSQFF    + + L+ KH +FG+V
Sbjct:    5 YIQEPPTNGKVLLKTT-----AGDIDIELWSKEAPKACRNFIQLCL----------EAYYDNTIFHRVVPGFIVQGGDPTGTGTGG-ESIYGAPFKDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLGRADELNNKHTIFGKV 133          
BLAST of CF834281 vs. ExPASy Swiss-Prot
Match: SDC10_RAT (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Rattus norvegicus GN=Sdccag10 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.333e-14
Identity = 50/145 (34.48%), Postives = 71/145 (48.97%), Query Frame = 1
Query:   13 HYQSKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQV 444
            + Q    N KV    T     AG I +EL++   P+   NF  LC             +Y  + FHRV+PGF+ Q            ES+YG+ F DE   + +    G+++MANAGP  NGSQFF    + + L+ KH +FG+V
Sbjct:    5 YIQEPPTNGKVLLKTT-----AGDIDIELWSKEAPKACRNFIQLCL----------EAYYDNTIFHRVVPGFIVQGGDPTGTGTGG-ESVYGAPFKDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLGRADELNNKHTIFGKV 133          
BLAST of CF834281 vs. ExPASy Swiss-Prot
Match: SDC10_BOVIN (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Bos taurus GN=SDCCAG10 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.251e-13
Identity = 51/145 (35.17%), Postives = 70/145 (48.28%), Query Frame = 1
Query:   13 HYQSKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQV 444
            + Q    N KV    T     AG I +EL++   P+   NF  LC             +Y  + FHRV+PGF+ Q            ESIYG  F DE   + +    G+++MANAGP  NGSQFF    + + L+ KH +FG+V
Sbjct:    5 YIQEPPTNGKVLLKTT-----AGDIDIELWSKEAPKACRNFIQLCL----------EAYYDNTIFHRVVPGFIVQGGDPTGTGTGG-ESIYGVPFKDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLGRADELNNKHTIFGKV 133          
The following BLAST results are available for this feature:
BLAST of CF834281 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 232
Match NameE-valueIdentityDescription
PPI1_STAAM2.977e-1533.91Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAAC2.977e-1533.91Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAAB2.977e-1533.91Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAA82.977e-1533.91Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAA32.977e-1533.91Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
CYPR_YEAST5.078e-1535.17Peptidyl-prolyl cis-trans isomerase CPR4 OS=Saccha... [more]
PPIL3_USTMA3.292e-1439.06Peptidyl-prolyl cis-trans isomerase-like 3 OS=Usti... [more]
SDC10_MOUSE5.615e-1435.17Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Mu... [more]
SDC10_RAT7.333e-1434.48Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Ra... [more]
SDC10_BOVIN1.251e-1335.17Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Bo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05E02_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834281 ID=CF834281; Name=CF834281; organism=Citrus sinensis; type=EST; length=773bp
TTTTTTCTCTCCCATTACCAATCAAAAATGCCAAACCCCAAAGTGTTCTT
CGACATGACCGTCGGCGGTCAGCCCGCCGGCAGGATCGTGATGGAGCTCT
TCGCCGATGTCACCCCCCGAACCGCCGAGAACTTCCGCGCCCTCTGCACC
GGCGAGAAAGGCATCGGCAAGTCCGGCAAGCCACTCCACTACAAGGGCTC
GTCCTTCCACCGTGTGATCCCCGGATTCATGTGCCAGGGGGGAGACTTCA
CCGCCGGAAACGGAACCGGAGGCGAATCAATCTACGGCTCAAAATTCGCC
GATGAGAACTTCGTGAAGAAGCACACCGGCCCCGGAATCCTCTCCATGGC
GAATGCCGGACCCGGAACCAACGGATCTCAGTTCTTCGTCTGTACGGCCA
AGACCGAGTGGCTCGATGGGAAGCACGTTGTGTTCGGTCAAGTCGTCGAA
GGAATGGACGTCGTCAAGGCCATCGAGAAAGTGGGGTCCAGCTCCGGAAG
GACCAACAAGCCCGTCGTGATCGCTGATTGCGGTCAATTGTCTTAGATTT
GATCATGATAATGATCGCCATCATCACGAGCCGTCTGATCGCGATCGTGA
TGGTGATTATGTTATCTATTATTATGTGGCCGTGTCTGTAGGACTTTTAA
TCTTTATCTAATTTTCCTGCTATGTTACTTGTTCGGGTTGGATCGGGTCT
CCGGTGGTGGTTCTTGATGAACTGTTTTTTATGTCTTTCTATGAGCTGCC
TTTTTAAATAAAAAAAAAAAAAA
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