CF834281

Overview
NameCF834281
Unique NameCF834281
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length773
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10954 contig Csv1_Contig10954:40..811. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF834281 vs. ExPASy Swiss-Prot
Match: PPIL2_ASPFU (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Aspergillus fumigatus GN=cyp8 PE=3 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.608e-11
Identity = 47/125 (37.60%), Postives = 60/125 (48.00%), Query Frame = 1 
Query:   79 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVE 450
            G + +EL  +  P+   NF  L   +KG        +YK  +FHR I GFM Q            ESI+G  F DE     KH   G LSMAN G  TN SQFF+       L+ KH +FG V++
Sbjct:  322 GDVNLELHTEYAPKAVWNFIKLA--KKG--------YYKDVTFHRNIKGFMIQGGDPTGTGRGG-ESIWGKYFNDEFEGPLKHDSRGTLSMANKGKNTNSSQFFIAYRALPHLNNKHTIFGHVID 435
[Close]
BLAST of CF834281 vs. ExPASy Swiss-Prot
Match: PPIL2_EMENI (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Emericella nidulans GN=cyp8 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.449e-11
Identity = 48/126 (38.10%), Postives = 61/126 (48.41%), Query Frame = 1 
Query:   76 AGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVE 450
            +G I +EL  +  P+   NF  L   +KG        +YK  +FHR I GFM Q            ESI+G  F DE     KH   G LSMAN G  TN SQFF+       L+ KH +FG V++
Sbjct:  319 SGDINLELHTEYAPKAVWNFIKLA--KKG--------YYKDVTFHRNIKGFMIQGGDPTGTGRGG-ESIWGKYFNDEFEGPLKHDSRGTLSMANKGKNTNSSQFFIAYRALPHLNLKHTIFGHVID 433
The following BLAST results are available for this feature:
BLAST of CF834281 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 232
Match NameE-valueIdentityDescription
PPIL2_ASPFU2.608e-1137.60Peptidyl-prolyl cis-trans isomerase-like 2 OS=Aspe... [more]
PPIL2_EMENI4.449e-1138.10Peptidyl-prolyl cis-trans isomerase-like 2 OS=Emer... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05E02_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834281 ID=CF834281; Name=CF834281; organism=Citrus sinensis; type=EST; length=773bp
TTTTTTCTCTCCCATTACCAATCAAAAATGCCAAACCCCAAAGTGTTCTT
CGACATGACCGTCGGCGGTCAGCCCGCCGGCAGGATCGTGATGGAGCTCT
TCGCCGATGTCACCCCCCGAACCGCCGAGAACTTCCGCGCCCTCTGCACC
GGCGAGAAAGGCATCGGCAAGTCCGGCAAGCCACTCCACTACAAGGGCTC
GTCCTTCCACCGTGTGATCCCCGGATTCATGTGCCAGGGGGGAGACTTCA
CCGCCGGAAACGGAACCGGAGGCGAATCAATCTACGGCTCAAAATTCGCC
GATGAGAACTTCGTGAAGAAGCACACCGGCCCCGGAATCCTCTCCATGGC
GAATGCCGGACCCGGAACCAACGGATCTCAGTTCTTCGTCTGTACGGCCA
AGACCGAGTGGCTCGATGGGAAGCACGTTGTGTTCGGTCAAGTCGTCGAA
GGAATGGACGTCGTCAAGGCCATCGAGAAAGTGGGGTCCAGCTCCGGAAG
GACCAACAAGCCCGTCGTGATCGCTGATTGCGGTCAATTGTCTTAGATTT
GATCATGATAATGATCGCCATCATCACGAGCCGTCTGATCGCGATCGTGA
TGGTGATTATGTTATCTATTATTATGTGGCCGTGTCTGTAGGACTTTTAA
TCTTTATCTAATTTTCCTGCTATGTTACTTGTTCGGGTTGGATCGGGTCT
CCGGTGGTGGTTCTTGATGAACTGTTTTTTATGTCTTTCTATGAGCTGCC
TTTTTAAATAAAAAAAAAAAAAA
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