CF834357

Overview
NameCF834357
Unique NameCF834357
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length775
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834357 vs. ExPASy Swiss-Prot
Match: CYSKP_SOLTU (Cysteine synthase, chloroplastic/chromoplastic OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.421e-57
Identity = 111/167 (66.47%), Postives = 131/167 (78.44%), Query Frame = -1
Query:  275 ANPKIHYETTGPEIWKGTGGKIDALVSXXXXXXXXXXXGKYLKEHNPEIKLYGVEPVESAVLSGGKPGPHKIQGIGAGFIPGVLDVNLLDETVQISSEEAIETAKLLALKEGLLVGISSGXXXXXXXXXAKRPENAGKLIVVVFPSFGERYLSSVLFESVKKEAESM 775
            ANPKIHYETTGPEIW+ T GKID LV+           G++LKE NP IK+ GVEP ES VLSGGKPGPHKIQGIGAGFIPG LD +++DE ++ISS+EA+ETA+ LAL+EGLLVGISSG          KRPENAGKLI VVFPS+GERYLSS+LF+S+++E E M
Sbjct:  216 ANPKIHYETTGPEIWEDTKGKIDILVAGIGTGGTITGTGRFLKEQNPNIKIIGVEPTESNVLSGGKPGPHKIQGIGAGFIPGNLDQDVMDEVIEISSDEAVETARTLALQEGLLVGISSGAAALAAIQVGKRPENAGKLIGVVFPSYGERYLSSILFQSIREECEKM 382          
BLAST of CF834357 vs. ExPASy Swiss-Prot
Match: CYSKP_SPIOL (Cysteine synthase, chloroplastic/chromoplastic OS=Spinacia oleracea GN=CYSK PE=1 SV=2)

HSP 1 Score: 218.779 bits (556), Expect = 2.681e-56
Identity = 104/167 (62.28%), Postives = 129/167 (77.25%), Query Frame = -1
Query:  275 ANPKIHYETTGPEIWKGTGGKIDALVSXXXXXXXXXXXGKYLKEHNPEIKLYGVEPVESAVLSGGKPGPHKIQGIGAGFIPGVLDVNLLDETVQISSEEAIETAKLLALKEGLLVGISSGXXXXXXXXXAKRPENAGKLIVVVFPSFGERYLSSVLFESVKKEAESM 775
            ANPKIHYETTGPEIW+ T GK+D  V+           G+YLKE NP +++ G+EP ES +LSGGKPGPHKIQG+GAGF+P  LD+ ++DE +++SSEEA+E AK LA+KEGLLVGISSG          KRPENAGKLI VVFPSFGERYLSS+LF+S+++E E+M
Sbjct:  214 ANPKIHYETTGPEIWEDTKGKVDIFVAGIGTGGTISGVGRYLKERNPGVQVIGIEPTESNILSGGKPGPHKIQGLGAGFVPSNLDLGVMDEVIEVSSEEAVEMAKQLAMKEGLLVGISSGAAAAAAVRIGKRPENAGKLIAVVFPSFGERYLSSILFQSIREECENM 380          
BLAST of CF834357 vs. ExPASy Swiss-Prot
Match: CYSKP_ARATH (Cysteine synthase, chloroplastic/chromoplastic OS=Arabidopsis thaliana GN=OASB PE=1 SV=2)

HSP 1 Score: 217.624 bits (553), Expect = 5.972e-56
Identity = 110/167 (65.87%), Postives = 130/167 (77.84%), Query Frame = -1
Query:  275 ANPKIHYETTGPEIWKGTGGKIDALVSXXXXXXXXXXXGKYLKEHNPEIKLYGVEPVESAVLSGGKPGPHKIQGIGAGFIPGVLDVNLLDETVQISSEEAIETAKLLALKEGLLVGISSGXXXXXXXXXAKRPENAGKLIVVVFPSFGERYLSSVLFESVKKEAESM 775
            ANPKIHYETTGPEIW+ T GKID LV+           G+++KE  PE+K+ GVEP ESA+LSGGKPGPHKIQGIGAGF+P  LD+ ++DE + ISSEEAIET+K LAL+EGLLVGISSG         AKRPENAGKLI VVFPSFGERYLS+ LF+S+++E E M
Sbjct:  222 ANPKIHYETTGPEIWEDTRGKIDILVAGIGTGGTITGVGRFIKERKPELKVIGVEPTESAILSGGKPGPHKIQGIGAGFVPKNLDLAIVDEYIAISSEEAIETSKQLALQEGLLVGISSGAAAAAAIQVAKRPENAGKLIAVVFPSFGERYLSTQLFQSIREECEQM 388          
BLAST of CF834357 vs. ExPASy Swiss-Prot
Match: CYSKM_ARATH (Cysteine synthase, mitochondrial OS=Arabidopsis thaliana GN=OASC PE=1 SV=3)

HSP 1 Score: 213.386 bits (542), Expect = 1.126e-54
Identity = 108/167 (64.67%), Postives = 126/167 (75.45%), Query Frame = -1
Query:  275 ANPKIHYETTGPEIWKGTGGKIDALVSXXXXXXXXXXXGKYLKEHNPEIKLYGVEPVESAVLSGGKPGPHKIQGIGAGFIPGVLDVNLLDETVQISSEEAIETAKLLALKEGLLVGISSGXXXXXXXXXAKRPENAGKLIVVVFPSFGERYLSSVLFESVKKEAESM 775
            ANPKIHYETTGPEIW  T GK+D  V+           G+++KE NP+ ++ GVEP ES +LSGGKPGPHKIQGIGAGFIP  LD  ++DE + ISSEEAIETAK LALKEGL+VGISSG         AKRPENAGKLI VVFPSFGERYLS+ LF+S+++E E M
Sbjct:  260 ANPKIHYETTGPEIWDDTKGKVDIFVAGIGTGGTITGVGRFIKEKNPKTQVIGVEPTESDILSGGKPGPHKIQGIGAGFIPKNLDQKIMDEVIAISSEEAIETAKQLALKEGLMVGISSGAAAAAAIKVAKRPENAGKLIAVVFPSFGERYLSTPLFQSIREEVEKM 426          
BLAST of CF834357 vs. ExPASy Swiss-Prot
Match: CYSKP_CAPAN (Cysteine synthase, chloroplastic/chromoplastic OS=Capsicum annuum PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 4.896e-50
Identity = 105/167 (62.87%), Postives = 122/167 (73.05%), Query Frame = -1
Query:  275 ANPKIHYETTGPEIWKGTGGKIDALVSXXXXXXXXXXXGKYLKEHNPEIKLYGVEPVESAVLSGGKPGPHKIQGIGAGFIPGVLDVNLLDETVQISSEEAIETAKLLALKEGLLVGISSGXXXXXXXXXAKRPENAGKLIVVVFPSFGERYLSSVLFESVKKEAESM 775
            ANPKIHYETTGPEIW+ T GKID LV+           G+YLKE NP IK+ GVEP ES VLSGGKPG          FIPG LD +++DE ++ISS+EA+ETAK LAL+EGLLVGISSG         AKRPENAGKLI VVFPSFGERYLSS+LF+S+++E E M
Sbjct:  214 ANPKIHYETTGPEIWEDTKGKIDILVAGIGTGGTISGTGRYLKEKNPNIKIIGVEPTESNVLSGGKPG----------FIPGNLDQDVMDEVIEISSDEAVETAKQLALQEGLLVGISSGAAALAAIQVAKRPENAGKLIAVVFPSFGERYLSSILFQSIREECEKM 370          
BLAST of CF834357 vs. ExPASy Swiss-Prot
Match: CYSK_SYNY3 (Cysteine synthase OS=Synechocystis sp. (strain PCC 6803) GN=cysK PE=3 SV=2)

HSP 1 Score: 163.696 bits (413), Expect = 1.023e-39
Identity = 86/161 (53.42%), Postives = 105/161 (65.22%), Query Frame = -1
Query:  293 ANPKIHYETTGPEIWKGTGGKIDALVSXXXXXXXXXXXGKYLKEHNPEIKLYGVEPVESAVLSGGKPGPHKIQGIGAGFIPGVLDVNLLDETVQISSEEAIETAKLLALKEGLLVGISSGXXXXXXXXXAKRPENAGKLIVVVFPSFGERYLSSVLFESVK 775
            ANP+IH +TT  EIW+ T G ID LV+              LKE  P  +   VEP  S VLSGGKPGPHKIQGIGAGFIP VLDVNL+DE + ++ EEAI   + LA +EG+L GIS+G         AKRP N  KLIV++ PSFGERYLS+ LF+ ++
Sbjct:  152 ANPQIHQQTTALEIWQDTDGAIDFLVAGVGTGGTITGVASVLKEKKPSFQAIAVEPQNSPVLSGGKPGPHKIQGIGAGFIPEVLDVNLIDEVIAVTDEEAIAYGRRLAREEGILSGISTGAALAAAIKVAKRPANKDKLIVMIQPSFGERYLSTPLFQDLE 312          
BLAST of CF834357 vs. ExPASy Swiss-Prot
Match: CYSK_NEIMB (Cysteine synthase OS=Neisseria meningitidis serogroup B GN=cysK PE=1 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.337e-39
Identity = 83/157 (52.87%), Postives = 107/157 (68.15%), Query Frame = -1
Query:  305 ANPKIHYETTGPEIWKGTGGKIDALVSXXXXXXXXXXXGKYLKEHNPEIKLYGVEPVESAVLSGGKPGPHKIQGIGAGFIPGVLDVNLLDETVQISSEEAIETAKLLALKEGLLVGISSGXXXXXXXXXAKRPENAGKLIVVVFPSFGERYLSSVLF 775
            ANP++H +TT  EIW+ T GK+D  V+           G+ LK++ PE+K+  VEP  S VLSGG+ GPH IQGIGAGFIP VL+  + D   ++S+E A ETA+ +A KEG+LVGISSG         AK+PEN GKLIVV+ PS+GERYLS+ LF
Sbjct:  150 ANPEVHRKTTAEEIWRDTDGKVDVFVAGVGTGGTITGVGEVLKKYKPEVKVVAVEPEASPVLSGGEKGPHPIQGIGAGFIPTVLNTKIYDSITKVSNEAAFETARAIAEKEGILVGISSGAAVWSALQLAKQPENEGKLIVVLLPSYGERYLSTPLF 306          
BLAST of CF834357 vs. ExPASy Swiss-Prot
Match: CYSK_MYCTU (Cysteine synthase A OS=Mycobacterium tuberculosis GN=cysK PE=1 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.746e-39
Identity = 83/160 (51.88%), Postives = 104/160 (65.00%), Query Frame = -1
Query:  296 ANPKIHYETTGPEIWKGTGGKIDALVSXXXXXXXXXXXGKYLKEHNPEIKLYGVEPVESAVLSGGKPGPHKIQGIGAGFIPGVLDVNLLDETVQISSEEAIETAKLLALKEGLLVGISSGXXXXXXXXXAKRPENAGKLIVVVFPSFGERYLSSVLFESV 775
            ANP IH  TT  E+W+ T GK+D +V+            + +KE  P  +   VEP  S VLSGG+ GPH IQGIGAGF+P VLD +L+DE + + +E+A+  A+ LA +EGLLVGISSG         A+RPENAGKLIVVV P FGERYLS+ LF  V
Sbjct:  149 ANPAIHRVTTAEEVWRDTDGKVDIVVAGVGTGGTITGVAQVIKERKPSARFVAVEPAASPVLSGGQKGPHPIQGIGAGFVPPVLDQDLVDEIITVGNEDALNVARRLAREEGLLVGISSGAATVAALQVARRPENAGKLIVVVLPDFGERYLSTPLFADV 308          
BLAST of CF834357 vs. ExPASy Swiss-Prot
Match: CYSK_MYCBO (Cysteine synthase A OS=Mycobacterium bovis GN=cysK PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.746e-39
Identity = 83/160 (51.88%), Postives = 104/160 (65.00%), Query Frame = -1
Query:  296 ANPKIHYETTGPEIWKGTGGKIDALVSXXXXXXXXXXXGKYLKEHNPEIKLYGVEPVESAVLSGGKPGPHKIQGIGAGFIPGVLDVNLLDETVQISSEEAIETAKLLALKEGLLVGISSGXXXXXXXXXAKRPENAGKLIVVVFPSFGERYLSSVLFESV 775
            ANP IH  TT  E+W+ T GK+D +V+            + +KE  P  +   VEP  S VLSGG+ GPH IQGIGAGF+P VLD +L+DE + + +E+A+  A+ LA +EGLLVGISSG         A+RPENAGKLIVVV P FGERYLS+ LF  V
Sbjct:  149 ANPAIHRVTTAEEVWRDTDGKVDIVVAGVGTGGTITGVAQVIKERKPSARFVAVEPAASPVLSGGQKGPHPIQGIGAGFVPPVLDQDLVDEIITVGNEDALNVARRLAREEGLLVGISSGAATVAALQVARRPENAGKLIVVVLPDFGERYLSTPLFADV 308          
BLAST of CF834357 vs. ExPASy Swiss-Prot
Match: CYSK_MYCLE (Cysteine synthase A OS=Mycobacterium leprae GN=cysK PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 5.079e-39
Identity = 82/157 (52.23%), Postives = 103/157 (65.61%), Query Frame = -1
Query:  305 ANPKIHYETTGPEIWKGTGGKIDALVSXXXXXXXXXXXGKYLKEHNPEIKLYGVEPVESAVLSGGKPGPHKIQGIGAGFIPGVLDVNLLDETVQISSEEAIETAKLLALKEGLLVGISSGXXXXXXXXXAKRPENAGKLIVVVFPSFGERYLSSVLF 775
            ANP IH  TT  E+W+ T GK+D  VS            + +KE  P  +   VEP  S VLSGG+ GPH IQGIGAGF+P VL ++L+DE V + +EEA++ A+ LA +EGLLVGIS+G         A+RPEN GKLIVVV P FGERYLS++LF
Sbjct:  149 ANPAIHAATTAEEVWRDTDGKVDIFVSGIGTGGTITGVARIIKERRPATQFVAVEPAASPVLSGGQKGPHPIQGIGAGFVPSVLVLDLVDEIVTVGNEEALDLARRLAKEEGLLVGISAGAAVCAALHVARRPENTGKLIVVVLPDFGERYLSTMLF 305          
The following BLAST results are available for this feature:
BLAST of CF834357 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
CYSKP_SOLTU1.421e-5766.47Cysteine synthase, chloroplastic/chromoplastic OS=... [more]
CYSKP_SPIOL2.681e-5662.28Cysteine synthase, chloroplastic/chromoplastic OS=... [more]
CYSKP_ARATH5.972e-5665.87Cysteine synthase, chloroplastic/chromoplastic OS=... [more]
CYSKM_ARATH1.126e-5464.67Cysteine synthase, mitochondrial OS=Arabidopsis th... [more]
CYSKP_CAPAN4.896e-5062.87Cysteine synthase, chloroplastic/chromoplastic OS=... [more]
CYSK_SYNY31.023e-3953.42Cysteine synthase OS=Synechocystis sp. (strain PCC... [more]
CYSK_NEIMB1.337e-3952.87Cysteine synthase OS=Neisseria meningitidis serogr... [more]
CYSK_MYCTU1.746e-3951.88Cysteine synthase A OS=Mycobacterium tuberculosis ... [more]
CYSK_MYCBO1.746e-3951.88Cysteine synthase A OS=Mycobacterium bovis GN=cysK... [more]
CYSK_MYCLE5.079e-3952.23Cysteine synthase A OS=Mycobacterium leprae GN=cys... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05G09_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834357 ID=CF834357; Name=CF834357; organism=Citrus sinensis; type=EST; length=775bp
CTCTACAACACCTACTTCCAAACTTTCCTTAATCTCAAGCACAGCATAGA
CTACAGAACTTTAACCCCTATGAGTTTCCACAGATTTTTACACAAACAGT
GAAACCTCCTCCAGAGGGTAAGGAATTGCAAAGATTTGTAGTTGTTTATA
AGAAAACATGAAGAAGCCAAAGCATCCAACCAAAATGAAATTCTGACTAG
AAAAGCAAGTTAGTCCCCACAGAATACGGGACTGGTGACTCAAAAGGTTT
GGGCATATCTCACGGCTCAAACACCATGCTCTCTGCCTCCTTTTTCACAG
ATTCAAATAAAACAGAAGAGAGGTATCGCTCTCCGAAGCTGGGGAAGACC
ACCACAATGAGTTTTCCAGCATTTTCTGGCCTCTTTGCTATCCGAATTGC
AGCTGCAGTAGCAGCTCCGGATGATATCCCAACCAACAATCCTTCTTTAA
GTGCAAGAAGCTTCGCAGTCTCAATAGCTTCTTCACTTGATATTTGAACA
GTTTCATCTAGTAAATTGACGTCCAAAACTCCAGGGATGAAGCCAGCACC
TATTCCTTGGATCTTATGGGGACCAGGTTTCCCTCCAGACAGCACAGCAC
TTTCAACTGGTTCAACGCCATAGAGCTTAATTTCAGGATTATGCTCTTTG
AGATACTTCCCTGCACCAGTGACAGTACCACCAGTCCCTATACCAGAAAC
AAGGGCATCAATCTTACCACCGGTGCCTTTCCAGATCTCTGGTCCGGTAG
TCTCGTAGTGGATCTTTGGGTTTGC
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