CF834419

Overview
NameCF834419
Unique NameCF834419
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length803
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834419 vs. ExPASy Swiss-Prot
Match: ALAM_YEAST (Probable alanine aminotransferase, mitochondrial OS=Saccharomyces cerevisiae GN=ALT1 PE=1 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 9.507e-44
Identity = 102/228 (44.74%), Postives = 138/228 (60.53%), Query Frame = 1
Query:  160 LDYESMNENVKKVQYAVRGELYLRASELQKEGKK---------IIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIV----FPADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRD-GYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVLVPVPQYPLYSATISLLGGSLVPYYLEETANWGLDLNDLQQSVAQARSKGITVRAMVIINP 801
            L  E +NENV K +YAVRG + +RA EL+ + +K         II  N+GNP  L Q+PLT+ RQV++L Q P LL+     +V    F  DAI RAK  +    G +GAYS S+G+ G+RK VAEFI +RD G  S PE IFLT GAS  V   L+   RG   GVL+P+PQYPLY+AT++L     +PYYL+E + W  +  +++  V +A    I    +V+INP
Sbjct:  111 LTLEDVNENVLKAKYAVRGAIPMRAEELKAQLEKDPQSLPFDRIINANIGNPQQLQQKPLTYYRQVLSLLQYPELLNQNEQQLVDSKLFKLDAIKRAKSLMEDIGGSVGAYSSSQGVEGIRKSVAEFITKRDEGEISYPEDIFLTAGASAAVNYLLSIFCRGPETGVLIPIPQYPLYTATLALNNSQALPYYLDENSGWSTNPEEIETVVKEAIQNEIKPTVLVVINP 338          
BLAST of CF834419 vs. ExPASy Swiss-Prot
Match: ALAT2_XENTR (Alanine aminotransferase 2 OS=Xenopus tropicalis GN=gpt2 PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.766e-43
Identity = 103/229 (44.98%), Postives = 146/229 (63.76%), Query Frame = 1
Query:  154 KALDYESMNENVKKVQYAVRGELYLRASELQKE---GKKIIFT-----NVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLSLTSG-GLGAYSDSRGIPGVRKEVAEFIERRDG-YPSDPELIFLTDGASKGVMQTLNCVIRGEGD---GVLVPVPQYPLYSATISLLGGSLVPYYLEETANWGLDLNDLQQSVAQARSKGITVRAMVIINP 801
            + L  ESMN  ++KV+YAVRG + +RA EL+KE   G K  FT     N+G+ HA+GQ+P+TF RQV A+C  P L++D      FP D   +A   L    G  +GAYS S+GI  +R++VA++IERRDG   SDP  I+L+ GAS  ++  L  ++ G+G    GVL+P+PQYPLYSA ++ L    V YYL+E   W LD+N+L++S+ +AR K    + + IINP
Sbjct:   47 RILTLESMNPCIQKVEYAVRGPIVIRAVELEKELQQGVKKPFTEVIKANIGDAHAMGQKPITFLRQVSAICLYPELMNDNK----FPEDVKQKAARILQACGGHSIGAYSASQGIEVIRQDVAKYIERRDGGIQSDPNNIYLSTGASDSIVTMLKLLVSGQGKSRTGVLIPIPQYPLYSAALAELNAVQVNYYLDEENCWALDINELRRSLTEAR-KHCDPKVLCIINP 270          
BLAST of CF834419 vs. ExPASy Swiss-Prot
Match: ALAT2_HUMAN (Alanine aminotransferase 2 OS=Homo sapiens GN=GPT2 PE=1 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.766e-43
Identity = 101/229 (44.10%), Postives = 145/229 (63.32%), Query Frame = 1
Query:  154 KALDYESMNENVKKVQYAVRGELYLRASELQKEGKK--------IIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLSLTSGG-LGAYSDSRGIPGVRKEVAEFIERRDG-YPSDPELIFLTDGASKGVMQTLNCVIRGEGD---GVLVPVPQYPLYSATISLLGGSLVPYYLEETANWGLDLNDLQQSVAQARSKGITVRAMVIINP 801
            + L  ESMN  VK V+YAVRG + L+A E++ E ++        +I  N+G+  A+GQ+P+TF RQV+ALC  P LLD P+    FP DA  RA+  L    G  LG+YS S+G+  +R++VA +I RRDG  P+DP+ I+LT GAS G+   L  ++ G G    GV++P+PQYPLYSA IS L    V YYL+E   W L++N+L+++V +A+      + + IINP
Sbjct:   46 RILTLESMNPQVKAVEYAVRGPIVLKAGEIELELQRGIKKPFTEVIRANIGDAQAMGQQPITFLRQVMALCTYPNLLDSPS----FPEDAKKRARRILQACGGNSLGSYSASQGVNCIREDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKILVSGGGKSRTGVMIPIPQYPLYSAVISELDAIQVNYYLDEENCWALNVNELRRAVQEAKDH-CDPKVLCIINP 269          
BLAST of CF834419 vs. ExPASy Swiss-Prot
Match: ALAT_YEAST (Probable alanine aminotransferase OS=Saccharomyces cerevisiae GN=ALT2 PE=1 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 4.718e-43
Identity = 93/225 (41.33%), Postives = 140/225 (62.22%), Query Frame = 1
Query:  169 ESMNENVKKVQYAVRGELYLRASELQKEGKK---------IIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGI----VFPADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDG-YPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVLVPVPQYPLYSATISLLGGSLVPYYLEETANWGLDLNDLQQSVAQARSKGITVRAMVIINP 801
            + +N  V K +YAVRG +  RA EL++E KK         II  N+GNP  L Q+PLTF RQV+A+ + P +L   +  +    +F  DA+ RA+  L+   G +GAYS S+G+PG+R+ VA+FI RRDG  P+ PE I+LT GAS      L+ + +    G+L+P+PQYPLY+A+ SL    ++PYYL+E +NW  + +++++ V  A  K I    +++INP
Sbjct:   29 KDLNTGVTKAEYAVRGAIPTRADELKEELKKNPEVLPFDDIINANIGNPQQLDQKPLTFTRQVLAILEYPEILRVGHNELASLNLFSRDALERAERLLNDIGGSIGAYSHSQGVPGIRQTVADFITRRDGGEPATPEDIYLTTGASSAATSLLSLLCKDSQTGLLIPIPQYPLYTASASLFNAQVLPYYLDEESNWSTNSDEIEKVVQDALKKQIRPSVLIVINP 253          
BLAST of CF834419 vs. ExPASy Swiss-Prot
Match: ALAT2_XENLA (Alanine aminotransferase 2 OS=Xenopus laevis GN=gpt2 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.342e-42
Identity = 101/229 (44.10%), Postives = 147/229 (64.19%), Query Frame = 1
Query:  154 KALDYESMNENVKKVQYAVRGELYLRASELQKE---GKKIIFT-----NVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLSLTSG-GLGAYSDSRGIPGVRKEVAEFIERRDG-YPSDPELIFLTDGASKGVMQTLNCVIRGEGD---GVLVPVPQYPLYSATISLLGGSLVPYYLEETANWGLDLNDLQQSVAQARSKGITVRAMVIINP 801
            + L  +SMN  ++KV+YAVRG + +RA EL+KE   G K  FT     N+G+ HA+GQ+P+TF RQV A+C  P L++D      FP D   +A   L    G  +GAYS S+GI  +R++VA++IERRDG   SDP  I+L+ GAS  ++  L  ++ G+G    GV++P+PQYPLYSA ++ L    V YYL+E   W LD+N+L++++A+AR K    + + IINP
Sbjct:   63 RILTLDSMNPCIQKVEYAVRGPIVIRAVELEKELQQGVKKPFTEVIKANIGDAHAMGQKPVTFLRQVSAICLYPELMNDNK----FPEDVKQKAARILQACGGHSIGAYSASQGIEVIRQDVAKYIERRDGGILSDPNNIYLSTGASDSIVTMLKLLVSGQGKSRTGVMIPIPQYPLYSAALAELDAVQVNYYLDEENCWALDINELRRALAEAR-KHCDPKVLCIINP 286          
BLAST of CF834419 vs. ExPASy Swiss-Prot
Match: AAT_MYCTU (Probable aspartate aminotransferase OS=Mycobacterium tuberculosis GN=aspC PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.751e-19
Identity = 64/211 (30.33%), Postives = 105/211 (49.76%), Query Frame = 1
Query:  172 SMNENVKKVQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPS-DPELIFLTDGASKGVMQTLNCVIRGEGDGVLVPVPQYPLYSATISLLGGSLVPYYLEETANWGLDLNDLQQSVAQARSKGITVRAMVIINP 801
            + +  ++ V Y +RG ++  A+ L+ EG +I+  N+GNP                   APF  + P+V +     A+  A+            YSDS+GI   R+ V    E   G+P  D + ++L +G S+ +  TL  ++   GD VL+P P YPL++A+ SL GG+ V Y  +ET  W  D+ DL+  + +        +A+V+INP
Sbjct:   29 AQSAKLQDVLYEIRGPVHQHAARLEAEGHRILKLNIGNP-------------------APFGFEAPDVIMRDIIQALPYAQ-----------GYSDSQGILSARRAVVTRYELVPGFPRFDVDDVYLGNGVSELITMTLQALL-DNGDQVLIPSPDYPLWTASTSLAGGTPVHYLCDETQGWQPDIADLESKITE------RTKALVVINP 202          
BLAST of CF834419 vs. ExPASy Swiss-Prot
Match: AAT_MYCBO (Probable aspartate aminotransferase OS=Mycobacterium bovis GN=aspC PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.751e-19
Identity = 64/211 (30.33%), Postives = 105/211 (49.76%), Query Frame = 1
Query:  172 SMNENVKKVQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPS-DPELIFLTDGASKGVMQTLNCVIRGEGDGVLVPVPQYPLYSATISLLGGSLVPYYLEETANWGLDLNDLQQSVAQARSKGITVRAMVIINP 801
            + +  ++ V Y +RG ++  A+ L+ EG +I+  N+GNP                   APF  + P+V +     A+  A+            YSDS+GI   R+ V    E   G+P  D + ++L +G S+ +  TL  ++   GD VL+P P YPL++A+ SL GG+ V Y  +ET  W  D+ DL+  + +        +A+V+INP
Sbjct:   29 AQSAKLQDVLYEIRGPVHQHAARLEAEGHRILKLNIGNP-------------------APFGFEAPDVIMRDIIQALPYAQ-----------GYSDSQGILSARRAVVTRYELVPGFPRFDVDDVYLGNGVSELITMTLQALL-DNGDQVLIPSPDYPLWTASTSLAGGTPVHYLCDETQGWQPDIADLESKITE------RTKALVVINP 202          
BLAST of CF834419 vs. ExPASy Swiss-Prot
Match: YFBQ_SHIFL (Uncharacterized aminotransferase yfbQ OS=Shigella flexneri GN=yfbQ PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.607e-17
Identity = 60/208 (28.85%), Postives = 102/208 (49.04%), Query Frame = 1
Query:  178 NENVKKVQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVLVPVPQYPLYSATISLLGGSLVPYYLEETANWGLDLNDLQQSVAQARSKGITVRAMVIINP 801
            +  ++ V Y +RG +   A  L++EG K++  N+GNP                   APF  D P+  +V     +  A+            Y DS+G+   RK + +  + R       E I++ +G S+ ++Q +  ++   GD +LVP P YPL++A +SL  G  V Y  +E+++W  DL+D++  +   R++GI     VIINP
Sbjct:    7 SSKLENVCYDIRGPVLKEAKRLEEEGNKVLKLNIGNP-------------------APFGFDAPDEILVDVIRNLPTAQ-----------GYCDSKGLYSARKAIMQHYQARGMRDVTVEDIYIGNGVSELIVQAMQALLNS-GDEMLVPAPDYPLWTAAVSLSSGKAVHYLCDESSDWFPDLDDIRAKIT-PRTRGI-----VIINP 177          
BLAST of CF834419 vs. ExPASy Swiss-Prot
Match: YFBQ_ECOLI (Uncharacterized aminotransferase yfbQ OS=Escherichia coli (strain K12) GN=yfbQ PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.607e-17
Identity = 60/208 (28.85%), Postives = 102/208 (49.04%), Query Frame = 1
Query:  178 NENVKKVQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVLVPVPQYPLYSATISLLGGSLVPYYLEETANWGLDLNDLQQSVAQARSKGITVRAMVIINP 801
            +  ++ V Y +RG +   A  L++EG K++  N+GNP                   APF  D P+  +V     +  A+            Y DS+G+   RK + +  + R       E I++ +G S+ ++Q +  ++   GD +LVP P YPL++A +SL  G  V Y  +E+++W  DL+D++  +   R++GI     VIINP
Sbjct:    7 SSKLENVCYDIRGPVLKEAKRLEEEGNKVLKLNIGNP-------------------APFGFDAPDEILVDVIRNLPTAQ-----------GYCDSKGLYSARKAIMQHYQARGMRDVTVEDIYIGNGVSELIVQAMQALLNS-GDEMLVPAPDYPLWTAAVSLSSGKAVHYLCDESSDWFPDLDDIRAKIT-PRTRGI-----VIINP 177          
BLAST of CF834419 vs. ExPASy Swiss-Prot
Match: YFBQ_ECOL6 (Uncharacterized aminotransferase yfbQ OS=Escherichia coli O6 GN=yfbQ PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.607e-17
Identity = 60/208 (28.85%), Postives = 102/208 (49.04%), Query Frame = 1
Query:  178 NENVKKVQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVLVPVPQYPLYSATISLLGGSLVPYYLEETANWGLDLNDLQQSVAQARSKGITVRAMVIINP 801
            +  ++ V Y +RG +   A  L++EG K++  N+GNP                   APF  D P+  +V     +  A+            Y DS+G+   RK + +  + R       E I++ +G S+ ++Q +  ++   GD +LVP P YPL++A +SL  G  V Y  +E+++W  DL+D++  +   R++GI     VIINP
Sbjct:    7 SSKLENVCYDIRGPVLKEAKRLEEEGNKVLKLNIGNP-------------------APFGFDAPDEILVDVIRNLPTAQ-----------GYCDSKGLYSARKAIMQHYQARGMRDVTVEDIYIGNGVSELIVQAMQALLNS-GDEMLVPAPDYPLWTAAVSLSSGKAVHYLCDESSDWFPDLDDIRAKIT-PRTRGI-----VIINP 177          
The following BLAST results are available for this feature:
BLAST of CF834419 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
ALAM_YEAST9.507e-4444.74Probable alanine aminotransferase, mitochondrial O... [more]
ALAT2_XENTR2.766e-4344.98Alanine aminotransferase 2 OS=Xenopus tropicalis G... [more]
ALAT2_HUMAN2.766e-4344.10Alanine aminotransferase 2 OS=Homo sapiens GN=GPT2... [more]
ALAT_YEAST4.718e-4341.33Probable alanine aminotransferase OS=Saccharomyces... [more]
ALAT2_XENLA2.342e-4244.10Alanine aminotransferase 2 OS=Xenopus laevis GN=gp... [more]
AAT_MYCTU4.751e-1930.33Probable aspartate aminotransferase OS=Mycobacteri... [more]
AAT_MYCBO4.751e-1930.33Probable aspartate aminotransferase OS=Mycobacteri... [more]
YFBQ_SHIFL2.607e-1728.85Uncharacterized aminotransferase yfbQ OS=Shigella ... [more]
YFBQ_ECOLI2.607e-1728.85Uncharacterized aminotransferase yfbQ OS=Escherich... [more]
YFBQ_ECOL62.607e-1728.85Uncharacterized aminotransferase yfbQ OS=Escherich... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05H24_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05H24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834419 ID=CF834419; Name=CF834419; organism=Citrus sinensis; type=EST; length=803bp
CCTTTTGATCAAATCCTAATATCAGCTTAGCAGGCGCTTGCATTTTTCTG
TGCACGTCAGTGTAATTGTAAACATTCAATTGGCTCGAGCCGAAGTTAGC
CCACAAGCACTCTCTCAGTTAAGATCCCAGGCGTTTAGTACATCATGGCA
CCAAAGGCATTGGACTATGAGTCTATGAATGAAAACGTGAAGAAGGTTCA
ATATGCTGTTAGAGGAGAGTTGTATCTTCGAGCTTCTGAGCTTCAGAAGG
AAGGGAAGAAGATTATTTTTACAAATGTTGGCAACCCTCATGCTCTAGGA
CAGAGGCCATTGACCTTCCCTCGGCAGGTGGTTGCTCTTTGCCAGGCTCC
ATTTTTGCTAGATGATCCTAATGTAGGAATTGTCTTCCCTGCTGATGCAA
TTGCAAGAGCTAAACATTATCTTTCCCTGACTTCAGGGGGTCTAGGTGCT
TACAGTGACTCCAGAGGTATTCCAGGTGTAAGGAAGGAAGTAGCAGAGTT
CATTGAAAGGCGCGATGGTTATCCAAGTGACCCAGAACTCATATTTCTCA
CTGATGGTGCCAGCAAAGGAGTTATGCAGACTTTAAATTGTGTCATCCGT
GGTGAAGGGGATGGGGTTTTGGTTCCAGTTCCACAGTACCCACTGTACTC
AGCTACCATATCTCTTTTAGGTGGTTCTCTTGTTCCATACTACTTGGAAG
AGACAGCAAATTGGGGTCTTGATCTTAATGACCTTCAGCAGTCAGTTGCA
CAGGCTCGTTCTAAAGGAATTACGGTTAGAGCAATGGTGATTATTAATCC
TGG
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