CF834423
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF834423 vs. ExPASy Swiss-Prot
Match: EFTU_GLOVI (Elongation factor Tu OS=Gloeobacter violaceus GN=tufA PE=3 SV=2) HSP 1 Score: 153.295 bits (386), Expect = 3.526e-37 Identity = 73/114 (64.04%), Postives = 94/114 (82.46%), Query Frame = 2 Query: 2 YEITPSVDRYIPIPQRQTDLPFLLAVEYVFSITGRGTVATGRVERGTIKVGQTVDLVGLKETRNFTVTGVEMFQKTLYEAMAGDNVGLLLTGVQ*ADILRGMVLA*PGTITPRT 343 Y + +VD YIP P+R D PFL+AVE VFSITGRGTVATGR+ERG +KVG+T++LVG++ TR+ TVTG+EMFQK+L E +AGDN+G+LL G++ D+ RGMVLA PG+ITP T Sbjct: 200 YSLMDAVDAYIPTPERAIDKPFLMAVEDVFSITGRGTVATGRIERGKVKVGETIELVGIRGTRSTTVTGLEMFQKSLDEGLAGDNIGVLLRGIKKEDVERGMVLAKPGSITPHT 313
BLAST of CF834423 vs. ExPASy Swiss-Prot
Match: EFTU_CYAA5 (Elongation factor Tu OS=Cyanothece sp. (strain ATCC 51142) GN=tuf PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 3.526e-37 Identity = 75/113 (66.37%), Postives = 95/113 (84.07%), Query Frame = 2 Query: 5 EITPSVDRYIPIPQRQTDLPFLLAVEYVFSITGRGTVATGRVERGTIKVGQTVDLVGLKETRNFTVTGVEMFQKTLYEAMAGDNVGLLLTGVQ*ADILRGMVLA*PGTITPRT 343 E+ +VD IP P+R+ D PFL+AVE VFSI+GRGTVATGR+ERG +KVG+T+++VG+++TR+ TVTGVEMFQKTL E MAGDNVGLLL G++ DI RGMV+A PG+ITP T Sbjct: 201 ELMKAVDDNIPEPEREIDKPFLMAVEDVFSISGRGTVATGRIERGKVKVGETIEIVGIRDTRSTTVTGVEMFQKTLDEGMAGDNVGLLLRGIKKEDIERGMVIAKPGSITPHT 313
BLAST of CF834423 vs. ExPASy Swiss-Prot
Match: EFTU_OSTTA (Elongation factor Tu, chloroplastic OS=Ostreococcus tauri GN=tufA PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 4.605e-37 Identity = 76/114 (66.67%), Postives = 93/114 (81.58%), Query Frame = 2 Query: 2 YEITPSVDRYIPIPQRQTDLPFLLAVEYVFSITGRGTVATGRVERGTIKVGQTVDLVGLKETRNFTVTGVEMFQKTLYEAMAGDNVGLLLTGVQ*ADILRGMVLA*PGTITPRT 343 + + +VD YIP P R+TD FL+AVE VFSITGRGTVATGRVERGT+KVG +++++G +TR TVTG+EMFQKTL E++AGDNVG+LL G+Q DI RGMVLA PGTITP T Sbjct: 200 FSLMDNVDSYIPTPARETDKTFLMAVEDVFSITGRGTVATGRVERGTVKVGASIEIIGYVDTRVATVTGLEMFQKTLEESVAGDNVGVLLRGIQKEDIERGMVLAQPGTITPHT 313
BLAST of CF834423 vs. ExPASy Swiss-Prot
Match: EFTU_CYACA (Elongation factor Tu, chloroplastic OS=Cyanidium caldarium GN=tufA PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 4.605e-37 Identity = 77/112 (68.75%), Postives = 91/112 (81.25%), Query Frame = 2 Query: 2 YEITPSVDRYIPIPQRQTDLPFLLAVEYVFSITGRGTVATGRVERGTIKVGQTVDLVGLKETRNFTVTGVEMFQKTLYEAMAGDNVGLLLTGVQ*ADILRGMVLA*PGTITP 337 +E+ VD+Y P P+R D FL+AVE VFSITGRGTVATGR+ERG IKVG+TV++VGLK T + TVTG+EMFQKTL E +AGDNVG+LL GVQ DI RGMVLA PG+ITP Sbjct: 201 FELMDMVDKYFPTPERDIDKTFLMAVEDVFSITGRGTVATGRIERGAIKVGETVEIVGLKSTASTTVTGLEMFQKTLDEGLAGDNVGVLLRGVQKQDIERGMVLAKPGSITP 312
BLAST of CF834423 vs. ExPASy Swiss-Prot
Match: EFTU_GRATL (Elongation factor Tu, chloroplastic OS=Gracilaria tenuistipitata var. liui GN=tufA PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 6.015e-37 Identity = 76/114 (66.67%), Postives = 90/114 (78.95%), Query Frame = 2 Query: 2 YEITPSVDRYIPIPQRQTDLPFLLAVEYVFSITGRGTVATGRVERGTIKVGQTVDLVGLKETRNFTVTGVEMFQKTLYEAMAGDNVGLLLTGVQ*ADILRGMVLA*PGTITPRT 343 + + +VD YIP P R + FL+AVE VFSITGRGTVATGR+ERG IKVG T+++VGL+ET T+TG+EMFQKTL E MAGDN+G+LL GVQ DI RGMVLA PGTITP T Sbjct: 200 HSLMDAVDEYIPTPVRDVEKTFLMAVEDVFSITGRGTVATGRIERGIIKVGDTIEIVGLRETTTTTITGLEMFQKTLDEGMAGDNIGILLRGVQKKDIERGMVLAQPGTITPHT 313
BLAST of CF834423 vs. ExPASy Swiss-Prot
Match: EFTU_CYAP8 (Elongation factor Tu OS=Cyanothece sp. (strain PCC 8801) GN=tuf PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 1.340e-36 Identity = 75/108 (69.44%), Postives = 91/108 (84.26%), Query Frame = 2 Query: 20 VDRYIPIPQRQTDLPFLLAVEYVFSITGRGTVATGRVERGTIKVGQTVDLVGLKETRNFTVTGVEMFQKTLYEAMAGDNVGLLLTGVQ*ADILRGMVLA*PGTITPRT 343 VD YIP P+R+ D PFL+AVE VFSI+GRGTVATGR+ERG +KVG+TV++VG++ T + TVTGVEMFQKTL E +AGDNVGLLL GV+ DI RGMV+A PG+ITP T Sbjct: 206 VDAYIPEPEREIDKPFLMAVEDVFSISGRGTVATGRIERGKVKVGETVEIVGIRATSSTTVTGVEMFQKTLEEGLAGDNVGLLLRGVKKEDIERGMVIAKPGSITPHT 313
BLAST of CF834423 vs. ExPASy Swiss-Prot
Match: EFTU_CHLRE (Elongation factor Tu, chloroplastic OS=Chlamydomonas reinhardtii GN=tufA PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 1.340e-36 Identity = 75/114 (65.79%), Postives = 91/114 (79.82%), Query Frame = 2 Query: 2 YEITPSVDRYIPIPQRQTDLPFLLAVEYVFSITGRGTVATGRVERGTIKVGQTVDLVGLKETRNFTVTGVEMFQKTLYEAMAGDNVGLLLTGVQ*ADILRGMVLA*PGTITPRT 343 Y++ +VD YIP PQR+TD PFLLAVE V SITGRGTVATGRVERG +++ V++VGL+ T+ VTG+EMF+KTL E +AGDNVG+LL GVQ DI RGMV+A PGTITP T Sbjct: 200 YQLMDNVDSYIPTPQRETDKPFLLAVEDVLSITGRGTVATGRVERGALRISDNVEIVGLRPTQTAVVTGLEMFKKTLDETLAGDNVGVLLRGVQKKDIERGMVIAKPGTITPHT 313
BLAST of CF834423 vs. ExPASy Swiss-Prot
Match: EFTU_SYNSC (Elongation factor Tu OS=Synechococcus sp. (strain CC9605) GN=tuf PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 1.750e-36 Identity = 75/113 (66.37%), Postives = 91/113 (80.53%), Query Frame = 2 Query: 5 EITPSVDRYIPIPQRQTDLPFLLAVEYVFSITGRGTVATGRVERGTIKVGQTVDLVGLKETRNFTVTGVEMFQKTLYEAMAGDNVGLLLTGVQ*ADILRGMVLA*PGTITPRT 343 E+ +VD IP P+R+ D PFL+AVE VFSITGRGTVATGR+ERG +KVG+ +++VG+K+TR TVTGVEMF+K L E MAGDNVGLLL G+Q DI RGMVL PG+ITP T Sbjct: 191 ELMAAVDSSIPEPEREVDKPFLMAVEDVFSITGRGTVATGRIERGIVKVGEEIEIVGIKDTRKTTVTGVEMFRKLLDEGMAGDNVGLLLRGIQKEDIERGMVLVKPGSITPHT 303
BLAST of CF834423 vs. ExPASy Swiss-Prot
Match: EFTU_NOSP7 (Elongation factor Tu OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=tuf PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 1.750e-36 Identity = 72/114 (63.16%), Postives = 92/114 (80.70%), Query Frame = 2 Query: 2 YEITPSVDRYIPIPQRQTDLPFLLAVEYVFSITGRGTVATGRVERGTIKVGQTVDLVGLKETRNFTVTGVEMFQKTLYEAMAGDNVGLLLTGVQ*ADILRGMVLA*PGTITPRT 343 YE+ +VD +IP P+R D PFL+AVE VF+ITGRGTVATGR+ERG +KVG TV+L+GLK+TR VTG+EMF+K+L E +AGDN G+LL G++ DI RGMV+A PG+ITP T Sbjct: 200 YELMDAVDSFIPTPERDVDKPFLMAVEDVFTITGRGTVATGRIERGKVKVGDTVELIGLKDTRTTAVTGIEMFKKSLEEGLAGDNAGVLLRGLKKEDIERGMVIAKPGSITPHT 313
BLAST of CF834423 vs. ExPASy Swiss-Prot
Match: EFTU_GRALE (Elongation factor Tu, chloroplastic (Fragment) OS=Gracilaria lemaneiformis GN=tufA PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 1.750e-36 Identity = 75/114 (65.79%), Postives = 89/114 (78.07%), Query Frame = 2 Query: 2 YEITPSVDRYIPIPQRQTDLPFLLAVEYVFSITGRGTVATGRVERGTIKVGQTVDLVGLKETRNFTVTGVEMFQKTLYEAMAGDNVGLLLTGVQ*ADILRGMVLA*PGTITPRT 343 + + +VD YIP P R + FL+AVE VFSITGRGTV TGR+ERG IKVG T+++VGL+ET T+TG+EMFQKTL E MAGDN+G+LL GVQ DI RGMVLA PGTITP T Sbjct: 111 HSLMDAVDEYIPTPVRDVEKTFLMAVEDVFSITGRGTVTTGRIERGIIKVGDTIEIVGLRETTTTTITGLEMFQKTLDEGMAGDNIGILLRGVQKKDIERGMVLAQPGTITPHT 224 The following BLAST results are available for this feature:
BLAST of CF834423 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834423 ID=CF834423; Name=CF834423; organism=Citrus sinensis; type=EST; length=345bpback to top |