CF834423
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834423 vs. ExPASy Swiss-Prot
Match: EFTU_PROM0 (Elongation factor Tu OS=Prochlorococcus marinus (strain MIT 9301) GN=tuf PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 4.310e-35 Identity = 75/113 (66.37%), Postives = 90/113 (79.65%), Query Frame = 2 Query: 5 EITPSVDRYIPIPQRQTDLPFLLAVEYVFSITGRGTVATGRVERGTIKVGQTVDLVGLKETRNFTVTGVEMFQKTLYEAMAGDNVGLLLTGVQ*ADILRGMVLA*PGTITPRT 343 E+ +VD IP P+R+ D PFL+AVE VFSITGRGTVATGR+ERG +KVG+ V++VG+++TR TVTGVEMF+K L E MAGDNVGLLL GVQ DI RGMVL G+ITP T Sbjct: 191 ELMKAVDASIPEPEREVDKPFLMAVEDVFSITGRGTVATGRIERGKVKVGEEVEIVGIRDTRLTTVTGVEMFRKLLDEGMAGDNVGLLLRGVQKEDIERGMVLVKKGSITPHT 303
BLAST of CF834423 vs. ExPASy Swiss-Prot
Match: EFTU_PROMP (Elongation factor Tu OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=tuf PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 5.630e-35 Identity = 75/113 (66.37%), Postives = 90/113 (79.65%), Query Frame = 2 Query: 5 EITPSVDRYIPIPQRQTDLPFLLAVEYVFSITGRGTVATGRVERGTIKVGQTVDLVGLKETRNFTVTGVEMFQKTLYEAMAGDNVGLLLTGVQ*ADILRGMVLA*PGTITPRT 343 E+ +VD IP P+R+ D PFL+AVE VFSITGRGTVATGR+ERG +KVG+ V++VG+++TR TVTGVEMF+K L E MAGDNVGLLL GVQ DI RGMVL G+ITP T Sbjct: 191 ELMTAVDASIPEPEREIDKPFLMAVEDVFSITGRGTVATGRIERGKVKVGEEVEIVGIRDTRLTTVTGVEMFRKLLDEGMAGDNVGLLLRGVQKEDIERGMVLVKKGSITPHT 303
BLAST of CF834423 vs. ExPASy Swiss-Prot
Match: EFTU_PROM5 (Elongation factor Tu OS=Prochlorococcus marinus (strain MIT 9515) GN=tuf PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 7.352e-35 Identity = 74/113 (65.49%), Postives = 90/113 (79.65%), Query Frame = 2 Query: 5 EITPSVDRYIPIPQRQTDLPFLLAVEYVFSITGRGTVATGRVERGTIKVGQTVDLVGLKETRNFTVTGVEMFQKTLYEAMAGDNVGLLLTGVQ*ADILRGMVLA*PGTITPRT 343 E+ +VD IP P+R+ D PFL+A+E VFSITGRGTVATGR+ERG +KVG+ V++VG+++TR TVTGVEMF+K L E MAGDNVGLLL GVQ DI RGMVL G+ITP T Sbjct: 191 ELMKAVDASIPEPEREIDKPFLMAIEDVFSITGRGTVATGRIERGKVKVGEEVEIVGIRDTRLTTVTGVEMFRKLLDEGMAGDNVGLLLRGVQKEDIERGMVLVKKGSITPHT 303
BLAST of CF834423 vs. ExPASy Swiss-Prot
Match: EFTU_BRYPL (Elongation factor Tu, chloroplastic (Fragment) OS=Bryopsis plumosa GN=tufA PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 7.352e-35 Identity = 70/112 (62.50%), Postives = 89/112 (79.46%), Query Frame = 2 Query: 2 YEITPSVDRYIPIPQRQTDLPFLLAVEYVFSITGRGTVATGRVERGTIKVGQTVDLVGLKETRNFTVTGVEMFQKTLYEAMAGDNVGLLLTGVQ*ADILRGMVLA*PGTITP 337 Y++ VD YIP+P R TD PFL+A+E V SITGRGTV TGRVERG +VG +++VGLKETR T+TG+EMFQKTL +++AGDNVG+LL G+Q ++ GMVLA PG+ITP Sbjct: 111 YDLMNEVDNYIPLPTRDTDKPFLMAIENVVSITGRGTVTTGRVERGADQVGDNIEIVGLKETRQATITGLEMFQKTLEKSVAGDNVGVLLRGIQKEEVEPGMVLAKPGSITP 222
BLAST of CF834423 vs. ExPASy Swiss-Prot
Match: EFTU_PROWI (Elongation factor Tu, plastid OS=Prototheca wickerhamii GN=tufA PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 9.603e-35 Identity = 72/114 (63.16%), Postives = 90/114 (78.95%), Query Frame = 2 Query: 2 YEITPSVDRYIPIPQRQTDLPFLLAVEYVFSITGRGTVATGRVERGTIKVGQTVDLVGLKETRNFTVTGVEMFQKTLYEAMAGDNVGLLLTGVQ*ADILRGMVLA*PGTITPRT 343 Y + VD YIP P+R + PFL+A+E VFSITGRGTVATGRVERG +K+G +V++VGL T+ TVTG+EMFQKTL E++AGDNVG+LL G+Q +I RGMVLA P +ITP T Sbjct: 200 YNLMDIVDSYIPTPKRNIEKPFLMAIEDVFSITGRGTVATGRVERGVVKIGDSVEIVGLGATKITTVTGLEMFQKTLDESIAGDNVGILLRGIQKTEIQRGMVLAKPKSITPHT 313
BLAST of CF834423 vs. ExPASy Swiss-Prot
Match: EFTU_BORT9 (Elongation factor Tu OS=Borrelia turicatae (strain 91E135) GN=tuf PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 1.638e-34 Identity = 74/111 (66.67%), Postives = 86/111 (77.48%), Query Frame = 2 Query: 5 EITPSVDRYIPIPQRQTDLPFLLAVEYVFSITGRGTVATGRVERGTIKVGQTVDLVGLKETRNFTVTGVEMFQKTLYEAMAGDNVGLLLTGVQ*ADILRGMVLA*PGTITP 337 E+ ++D Y +PQR D PFLLAVE VFSI+GRGTVATGR+ERG IKVGQ V++VG++ETR TVTGVEMFQK L + AGDNVGLLL GV DI RG V+A GTITP Sbjct: 192 ELLETMDNYFDLPQRDIDKPFLLAVEDVFSISGRGTVATGRIERGVIKVGQEVEIVGIRETRKTTVTGVEMFQKILEQGQAGDNVGLLLRGVDKKDIERGQVIAAIGTITP 302
BLAST of CF834423 vs. ExPASy Swiss-Prot
Match: EFTU_ODOSI (Elongation factor Tu, chloroplastic OS=Odontella sinensis GN=tufA PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 2.139e-34 Identity = 70/114 (61.40%), Postives = 88/114 (77.19%), Query Frame = 2 Query: 2 YEITPSVDRYIPIPQRQTDLPFLLAVEYVFSITGRGTVATGRVERGTIKVGQTVDLVGLKETRNFTVTGVEMFQKTLYEAMAGDNVGLLLTGVQ*ADILRGMVLA*PGTITPRT 343 + + +VD YIP P+R + FL+A+E VFSITGRGTVATGR+ERG +KVG TV++VG+ +T+ T+TG+EMFQKTL E AGDNVG+LL GV DI GMVL+ PGTITP T Sbjct: 200 FALMDAVDEYIPTPERDIEKTFLMAIEDVFSITGRGTVATGRIERGVVKVGDTVEIVGVGDTQTTTITGIEMFQKTLDEGFAGDNVGILLRGVTREDIEAGMVLSEPGTITPHT 313
BLAST of CF834423 vs. ExPASy Swiss-Prot
Match: EFTU_MESVI (Elongation factor Tu, chloroplastic OS=Mesostigma viride GN=tufA PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 2.139e-34 Identity = 74/113 (65.49%), Postives = 88/113 (77.88%), Query Frame = 2 Query: 2 YEITPSVDRYIPIPQRQTDLPFLLAVEYVFSITGRGTVATGRVERGTIKVGQTVDLVGLKE-TRNFTVTGVEMFQKTLYEAMAGDNVGLLLTGVQ*ADILRGMVLA*PGTITP 337 Y + VD+YIP PQR TD PFL+A+E VFSITGRGTVATGRVERG + VG+ VD+VGL +N TVTG+EMFQKTL E++AGDNVG+LL G+Q + RGMVLA P TI P Sbjct: 200 YALMDQVDKYIPTPQRDTDKPFLMAIEDVFSITGRGTVATGRVERGKVVVGENVDIVGLANIPQNTTVTGLEMFQKTLEESVAGDNVGVLLRGIQKDQVERGMVLAKPNTIKP 312
BLAST of CF834423 vs. ExPASy Swiss-Prot
Match: EFTU_PROMA (Elongation factor Tu OS=Prochlorococcus marinus GN=tuf PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 2.794e-34 Identity = 73/113 (64.60%), Postives = 89/113 (78.76%), Query Frame = 2 Query: 5 EITPSVDRYIPIPQRQTDLPFLLAVEYVFSITGRGTVATGRVERGTIKVGQTVDLVGLKETRNFTVTGVEMFQKTLYEAMAGDNVGLLLTGVQ*ADILRGMVLA*PGTITPRT 343 E+ +VD IP P+R+ D PFL+AVE VFSITGRGTVATGR+ERG + VG+ V++VG+++TR TVTGVEMF+K L E MAGDNVGLLL G+Q DI RGMVL G+ITP T Sbjct: 191 ELMKAVDASIPEPEREVDKPFLMAVEDVFSITGRGTVATGRIERGKVTVGEEVEIVGIRDTRLTTVTGVEMFRKLLDEGMAGDNVGLLLRGIQKEDIERGMVLVKKGSITPHT 303
BLAST of CF834423 vs. ExPASy Swiss-Prot
Match: EFTU_CYCME (Elongation factor Tu, chloroplastic OS=Cyclotella meneghiniana GN=tufA PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 3.649e-34 Identity = 71/114 (62.28%), Postives = 87/114 (76.32%), Query Frame = 2 Query: 2 YEITPSVDRYIPIPQRQTDLPFLLAVEYVFSITGRGTVATGRVERGTIKVGQTVDLVGLKETRNFTVTGVEMFQKTLYEAMAGDNVGLLLTGVQ*ADILRGMVLA*PGTITPRT 343 Y + +VD YIP P+R + FL+A+E VFSITGRGTVATGR+ERG IKV V++VG+ +T+ T+TG+EMFQKTL E AGDNVG+LL GV +I RGMVLA PGTITP T Sbjct: 200 YALMDAVDAYIPTPERDVEKTFLMAIEDVFSITGRGTVATGRIERGVIKVVDNVEIVGIGDTKTTTITGIEMFQKTLEEGFAGDNVGILLRGVTRENIERGMVLAKPGTITPHT 313 The following BLAST results are available for this feature:
BLAST of CF834423 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF834423 ID=CF834423; Name=CF834423; organism=Citrus sinensis; type=EST; length=345bpback to top |