CF834423
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF834423 vs. ExPASy Swiss-Prot
Match: EFTU_ASTLO (Elongation factor Tu, plastid OS=Astasia longa GN=tufA PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 3.649e-34 Identity = 70/111 (63.06%), Postives = 89/111 (80.18%), Query Frame = 2 Query: 5 EITPSVDRYIPIPQRQTDLPFLLAVEYVFSITGRGTVATGRVERGTIKVGQTVDLVGLKETRNFTVTGVEMFQKTLYEAMAGDNVGLLLTGVQ*ADILRGMVLA*PGTITP 337 ++ +D YIP P R TD FLLA+E V SITGRGTVATGR+ERG IKVG+TV+L+GLK ++ T+TG+EMFQK+L EA+AGDNVG+LL G+Q ++ RGMV+A PGTI P Sbjct: 201 DLMDKIDSYIPTPIRDTDKDFLLAIEDVLSITGRGTVATGRIERGKIKVGETVELIGLKNIKSTTITGLEMFQKSLDEAIAGDNVGVLLRGIQKNEVERGMVIAKPGTIQP 311
BLAST of CF834423 vs. ExPASy Swiss-Prot
Match: EFTU_THAPS (Elongation factor Tu, chloroplastic OS=Thalassiosira pseudonana GN=tufA PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 4.766e-34 Identity = 69/114 (60.53%), Postives = 88/114 (77.19%), Query Frame = 2 Query: 2 YEITPSVDRYIPIPQRQTDLPFLLAVEYVFSITGRGTVATGRVERGTIKVGQTVDLVGLKETRNFTVTGVEMFQKTLYEAMAGDNVGLLLTGVQ*ADILRGMVLA*PGTITPRT 343 + + +VD YIP P+R + FL+A+E VFSITGRGTVATGR+ERG +KVG V++VG+ +T+ T+TG+EMFQKTL E AGDNVG+LL GV +I RGMVL+ PGTITP T Sbjct: 200 FALMDAVDAYIPTPERDVEKTFLMAIEDVFSITGRGTVATGRIERGVVKVGDNVEIVGVGDTQTTTITGIEMFQKTLEEGFAGDNVGILLRGVTRENIERGMVLSKPGTITPHT 313
BLAST of CF834423 vs. ExPASy Swiss-Prot
Match: EFTU_PROM1 (Elongation factor Tu OS=Prochlorococcus marinus (strain NATL1A) GN=tuf PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 8.129e-34 Identity = 72/113 (63.72%), Postives = 89/113 (78.76%), Query Frame = 2 Query: 5 EITPSVDRYIPIPQRQTDLPFLLAVEYVFSITGRGTVATGRVERGTIKVGQTVDLVGLKETRNFTVTGVEMFQKTLYEAMAGDNVGLLLTGVQ*ADILRGMVLA*PGTITPRT 343 ++ +VD IP P+R+ D PFL+AVE VFSITGRGTVATGR+ERG + VG+ V++VG+++TR TVTGVEMF+K L E MAGDNVGLLL G+Q DI RGMVL G+ITP T Sbjct: 191 DLMTAVDASIPEPEREIDKPFLMAVEDVFSITGRGTVATGRIERGKVTVGEEVEIVGIRDTRLTTVTGVEMFRKLLDEGMAGDNVGLLLRGIQKEDIERGMVLVKKGSITPHT 303
BLAST of CF834423 vs. ExPASy Swiss-Prot
Match: EFTU_CODFR (Elongation factor Tu, chloroplastic OS=Codium fragile GN=tufA PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 8.129e-34 Identity = 70/112 (62.50%), Postives = 89/112 (79.46%), Query Frame = 2 Query: 2 YEITPSVDRYIPIPQRQTDLPFLLAVEYVFSITGRGTVATGRVERGTIKVGQTVDLVGLKETRNFTVTGVEMFQKTLYEAMAGDNVGLLLTGVQ*ADILRGMVLA*PGTITP 337 Y++ +VD YIP P+R T+ PFL+A+E V SITGRGTVATGRVERG I+VGQTV+LVGLK T+ +TG+EMF KTL +++AGDNVG+LL +Q +I RGMVLA P +I P Sbjct: 199 YDLMETVDEYIPTPKRDTEKPFLMAIENVVSITGRGTVATGRVERGMIEVGQTVELVGLKNTKEAIITGLEMFHKTLEKSVAGDNVGILLRRIQKEEIQRGMVLAKPSSILP 310
BLAST of CF834423 vs. ExPASy Swiss-Prot
Match: EFTU_BORRA (Elongation factor Tu OS=Borrelia recurrentis (strain A1) GN=tuf PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 8.129e-34 Identity = 72/111 (64.86%), Postives = 86/111 (77.48%), Query Frame = 2 Query: 5 EITPSVDRYIPIPQRQTDLPFLLAVEYVFSITGRGTVATGRVERGTIKVGQTVDLVGLKETRNFTVTGVEMFQKTLYEAMAGDNVGLLLTGVQ*ADILRGMVLA*PGTITP 337 E+ ++D Y +P+R D PFLLA+E VFSI+GRGTVATGR+ERG IKVGQ V++VG++ETR TVTGVEMFQK L + AGDNVGLLL GV DI RG V+A GTITP Sbjct: 192 ELLETMDNYFDLPERDIDKPFLLAIEDVFSISGRGTVATGRIERGVIKVGQEVEIVGIRETRKTTVTGVEMFQKILEQGEAGDNVGLLLRGVDKKDIERGQVIAALGTITP 302
BLAST of CF834423 vs. ExPASy Swiss-Prot
Match: EFTU_BORDL (Elongation factor Tu OS=Borrelia duttonii (strain Ly) GN=tuf PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 8.129e-34 Identity = 72/111 (64.86%), Postives = 86/111 (77.48%), Query Frame = 2 Query: 5 EITPSVDRYIPIPQRQTDLPFLLAVEYVFSITGRGTVATGRVERGTIKVGQTVDLVGLKETRNFTVTGVEMFQKTLYEAMAGDNVGLLLTGVQ*ADILRGMVLA*PGTITP 337 E+ ++D Y +P+R D PFLLA+E VFSI+GRGTVATGR+ERG IKVGQ V++VG++ETR TVTGVEMFQK L + AGDNVGLLL GV DI RG V+A GTITP Sbjct: 192 ELLETMDNYFDLPERDIDKPFLLAIEDVFSISGRGTVATGRIERGVIKVGQEVEIVGIRETRKTTVTGVEMFQKILEQGEAGDNVGLLLRGVDKKDIERGQVIAALGTITP 302
BLAST of CF834423 vs. ExPASy Swiss-Prot
Match: EFTU_PROMT (Elongation factor Tu OS=Prochlorococcus marinus (strain NATL2A) GN=tuf PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 1.062e-33 Identity = 71/113 (62.83%), Postives = 89/113 (78.76%), Query Frame = 2 Query: 5 EITPSVDRYIPIPQRQTDLPFLLAVEYVFSITGRGTVATGRVERGTIKVGQTVDLVGLKETRNFTVTGVEMFQKTLYEAMAGDNVGLLLTGVQ*ADILRGMVLA*PGTITPRT 343 ++ +VD IP P+R+ D PFL+A+E VFSITGRGTVATGR+ERG + VG+ V++VG+++TR TVTGVEMF+K L E MAGDNVGLLL G+Q DI RGMVL G+ITP T Sbjct: 191 DLMTAVDASIPEPEREIDKPFLMAIEDVFSITGRGTVATGRIERGKVTVGEEVEIVGIRDTRLTTVTGVEMFRKLLDEGMAGDNVGLLLRGIQKEDIERGMVLVKKGSITPHT 303
BLAST of CF834423 vs. ExPASy Swiss-Prot
Match: EFTU_NEIMF (Elongation factor Tu OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=tuf1 PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 1.811e-33 Identity = 70/114 (61.40%), Postives = 85/114 (74.56%), Query Frame = 2 Query: 2 YEITPSVDRYIPIPQRQTDLPFLLAVEYVFSITGRGTVATGRVERGTIKVGQTVDLVGLKETRNFTVTGVEMFQKTLYEAMAGDNVGLLLTGVQ*ADILRGMVLA*PGTITPRT 343 +E+ ++D YIP P+R D PFLL +E VFSI+GRGTV TGRVERG I VG +++VGLKET+ T TGVEMF+K L E AGDNVG+LL G + D+ RG VLA PGTITP T Sbjct: 190 FELAAALDSYIPTPERAVDKPFLLPIEDVFSISGRGTVVTGRVERGIIHVGDEIEIVGLKETQKTTCTGVEMFRKLLDEGQAGDNVGVLLRGTKREDVERGQVLAKPGTITPHT 303
BLAST of CF834423 vs. ExPASy Swiss-Prot
Match: EFTU_NEIMB (Elongation factor Tu OS=Neisseria meningitidis serogroup B GN=tufA PE=1 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 1.811e-33 Identity = 70/114 (61.40%), Postives = 85/114 (74.56%), Query Frame = 2 Query: 2 YEITPSVDRYIPIPQRQTDLPFLLAVEYVFSITGRGTVATGRVERGTIKVGQTVDLVGLKETRNFTVTGVEMFQKTLYEAMAGDNVGLLLTGVQ*ADILRGMVLA*PGTITPRT 343 +E+ ++D YIP P+R D PFLL +E VFSI+GRGTV TGRVERG I VG +++VGLKET+ T TGVEMF+K L E AGDNVG+LL G + D+ RG VLA PGTITP T Sbjct: 190 FELAAALDSYIPTPERAVDKPFLLPIEDVFSISGRGTVVTGRVERGIIHVGDEIEIVGLKETQKTTCTGVEMFRKLLDEGQAGDNVGVLLRGTKREDVERGQVLAKPGTITPHT 303
BLAST of CF834423 vs. ExPASy Swiss-Prot
Match: EFTU_NEIMA (Elongation factor Tu OS=Neisseria meningitidis serogroup A GN=tufA PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 1.811e-33 Identity = 70/114 (61.40%), Postives = 85/114 (74.56%), Query Frame = 2 Query: 2 YEITPSVDRYIPIPQRQTDLPFLLAVEYVFSITGRGTVATGRVERGTIKVGQTVDLVGLKETRNFTVTGVEMFQKTLYEAMAGDNVGLLLTGVQ*ADILRGMVLA*PGTITPRT 343 +E+ ++D YIP P+R D PFLL +E VFSI+GRGTV TGRVERG I VG +++VGLKET+ T TGVEMF+K L E AGDNVG+LL G + D+ RG VLA PGTITP T Sbjct: 190 FELAAALDSYIPTPERAVDKPFLLPIEDVFSISGRGTVVTGRVERGIIHVGDEIEIVGLKETQKTTCTGVEMFRKLLDEGQAGDNVGVLLRGTKREDVERGQVLAKPGTITPHT 303 The following BLAST results are available for this feature:
BLAST of CF834423 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834423 ID=CF834423; Name=CF834423; organism=Citrus sinensis; type=EST; length=345bpback to top |