CF834425

Overview
NameCF834425
Unique NameCF834425
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length727
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10954 contig Csv1_Contig10954:93..819. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF834425 vs. ExPASy Swiss-Prot
Match: PPIA_CERAE (Peptidyl-prolyl cis-trans isomerase A OS=Cercopithecus aethiops GN=PPIA PE=2 SV=2)

HSP 1 Score: 223.016 bits (567), Expect = 1.278e-57
Identity = 107/162 (66.05%), Postives = 125/162 (77.16%), Query Frame = -2 
Query:  241 MTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 726
            + V G+P GR+  ELFAD  P+TAENFRAL TGEKG G       YKGS FHR+IPGFMCQ           G+SIYG KF DENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKHVVFG+V EGM++V+A+E+ GS +G+T+K + IADCGQL
Sbjct:   10 IAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164
[Close]
BLAST of CF834425 vs. ExPASy Swiss-Prot
Match: PPIA_CRIGR (Peptidyl-prolyl cis-trans isomerase A OS=Cricetulus griseus GN=PPIA PE=2 SV=2)

HSP 1 Score: 222.246 bits (565), Expect = 2.179e-57
Identity = 106/162 (65.43%), Postives = 125/162 (77.16%), Query Frame = -2 
Query:  241 MTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 726
            ++  G+P GR+  ELFAD  P+TAENFRAL TGEKG G       YKGSSFHR+IPGFMCQ           G SIYG KF DENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKHVVFG+V EGM++V+A+E+ GS +G+T+K + I+DCGQL
Sbjct:   10 ISADGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSSFHRIIPGFMCQGGDFTRHNGTGGRSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITISDCGQL 164
[Close]
BLAST of CF834425 vs. ExPASy Swiss-Prot
Match: PPIA_PIG (Peptidyl-prolyl cis-trans isomerase A OS=Sus scrofa GN=PPIA PE=1 SV=2)

HSP 1 Score: 221.861 bits (564), Expect = 2.846e-57
Identity = 106/162 (65.43%), Postives = 125/162 (77.16%), Query Frame = -2 
Query:  241 MTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 726
            + V G+P GR+  ELFAD  P+TAENFRAL TGEKG G       YKGS FHR+IPGFMCQ           G+SIYG KF DENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKHVVFG+V EGM++V+A+E+ GS +G+T+K + IADCGQ+
Sbjct:   10 IAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFDDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQI 164
[Close]
BLAST of CF834425 vs. ExPASy Swiss-Prot
Match: PPIA_BOVIN (Peptidyl-prolyl cis-trans isomerase A OS=Bos taurus GN=PPIA PE=1 SV=2)

HSP 1 Score: 221.861 bits (564), Expect = 2.846e-57
Identity = 106/162 (65.43%), Postives = 125/162 (77.16%), Query Frame = -2 
Query:  241 MTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 726
            + V G+P GR+  ELFAD  P+TAENFRAL TGEKG G       YKGS FHR+IPGFMCQ           G+SIYG KF DENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKHVVFG+V EGM++V+A+E+ GS +G+T+K + IADCGQ+
Sbjct:   10 IAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFDDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQI 164
[Close]
BLAST of CF834425 vs. ExPASy Swiss-Prot
Match: PPIA_SAGOE (Peptidyl-prolyl cis-trans isomerase A OS=Saguinus oedipus GN=PPIA PE=3 SV=3)

HSP 1 Score: 221.09 bits (562), Expect = 4.855e-57
Identity = 106/162 (65.43%), Postives = 124/162 (76.54%), Query Frame = -2 
Query:  241 MTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 726
            + V G+P GR+  ELFAD  P+TAENFRAL TGEKG G       YKGS FHR+IPGFMCQ           G+SIYG KF DENF+ KHTGPGILSMANAGP TNGSQFF+CT KTEWLDGKHVVFG+V EGM++V+A+E+ GS +G+T+K + IADCGQL
Sbjct:   10 IAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFDDENFILKHTGPGILSMANAGPNTNGSQFFICTVKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164
[Close]
BLAST of CF834425 vs. ExPASy Swiss-Prot
Match: PPIA_MOUSE (Peptidyl-prolyl cis-trans isomerase A OS=Mus musculus GN=Ppia PE=1 SV=2)

HSP 1 Score: 221.09 bits (562), Expect = 4.855e-57
Identity = 106/162 (65.43%), Postives = 124/162 (76.54%), Query Frame = -2 
Query:  241 MTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 726
            +T   +P GR+  ELFAD  P+TAENFRAL TGEKG G       YKGSSFHR+IPGFMCQ           G SIYG KF DENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKHVVFG+V EGM++V+A+E+ GS +G+T+K + I+DCGQL
Sbjct:   10 ITADDEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSSFHRIIPGFMCQGGDFTRHNGTGGRSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITISDCGQL 164
[Close]
BLAST of CF834425 vs. ExPASy Swiss-Prot
Match: PPIA_AOTTR (Peptidyl-prolyl cis-trans isomerase A OS=Aotus trivirgatus GN=PPIA PE=2 SV=3)

HSP 1 Score: 221.09 bits (562), Expect = 4.855e-57
Identity = 106/162 (65.43%), Postives = 124/162 (76.54%), Query Frame = -2 
Query:  241 MTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 726
            + V G+P GR+  ELFAD  P+TAENFRAL TGEKG G       YKGS FHR+IPGFMCQ           G+SIYG KF DENF+ KHTGPGILSMANAGP TNGSQFF+CT KTEWLDGKHVVFG+V EGM++V+A+E+ GS +G+T+K + IADCGQL
Sbjct:   10 IAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFDDENFILKHTGPGILSMANAGPNTNGSQFFICTVKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164
[Close]
BLAST of CF834425 vs. ExPASy Swiss-Prot
Match: PPIA_BLAGE (Peptidyl-prolyl cis-trans isomerase OS=Blattella germanica GN=CYPA PE=2 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 6.341e-57
Identity = 108/162 (66.67%), Postives = 121/162 (74.69%), Query Frame = -2 
Query:  241 MTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 726
            M+  GQP GRIVMEL +DV P+TAENFRALCTGEKG G       YKGS FHRVIP FMCQ           G+SIYG+KF DENF  KHTGPGIL MANAGP TNGSQFF+ TAKT WLD +HVVFG VVEGMDVVK +E +GS SG+TNK + + DCGQ+
Sbjct:   10 MSADGQPVGRIVMELRSDVVPKTAENFRALCTGEKGFG-------YKGSRFHRVIPNFMCQGGDFTNHNGTGGKSIYGTKFEDENFQLKHTGPGILWMANAGPNTNGSQFFITTAKTSWLDNRHVVFGSVVEGMDVVKKLESLGSQSGKTNKKIAVVDCGQI 164
[Close]
BLAST of CF834425 vs. ExPASy Swiss-Prot
Match: PPIA_FELCA (Peptidyl-prolyl cis-trans isomerase A OS=Felis catus GN=PPIA PE=2 SV=3)

HSP 1 Score: 220.32 bits (560), Expect = 8.281e-57
Identity = 105/162 (64.81%), Postives = 124/162 (76.54%), Query Frame = -2 
Query:  241 MTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 726
            + V G+P GR+  +LFAD  P+TAENFRAL TGEKG G       YKGS FHR+IPGFMCQ           G+SIYG KF DENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKHVVFG V EGM++V+A+E+ GS +G+T+K + IADCGQ+
Sbjct:   10 IAVDGEPLGRVSFDLFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFDDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGMVKEGMNIVEAMERFGSRNGKTSKKITIADCGQI 164
[Close]
BLAST of CF834425 vs. ExPASy Swiss-Prot
Match: PPIA_RABIT (Peptidyl-prolyl cis-trans isomerase A OS=Oryctolagus cuniculus GN=PPIA PE=2 SV=3)

HSP 1 Score: 219.164 bits (557), Expect = 1.845e-56
Identity = 106/162 (65.43%), Postives = 123/162 (75.93%), Query Frame = -2 
Query:  241 MTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 726
            + V G+P GR+  ELFAD  P+TAENFRAL TGEKG G       YKGS FHR+IPGFMCQ           G+SIYG KF DENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKHVVFG+V EGM +V+A+E  GS +G+T+K + IA+CGQL
Sbjct:   10 IAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFLLKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGRVKEGMSIVEAMEHFGSENGKTSKKITIANCGQL 164
The following BLAST results are available for this feature:
BLAST of CF834425 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 232
Match NameE-valueIdentityDescription
PPIA_CERAE1.278e-5766.05Peptidyl-prolyl cis-trans isomerase A OS=Cercopith... [more]
PPIA_CRIGR2.179e-5765.43Peptidyl-prolyl cis-trans isomerase A OS=Cricetulu... [more]
PPIA_PIG2.846e-5765.43Peptidyl-prolyl cis-trans isomerase A OS=Sus scrof... [more]
PPIA_BOVIN2.846e-5765.43Peptidyl-prolyl cis-trans isomerase A OS=Bos tauru... [more]
PPIA_SAGOE4.855e-5765.43Peptidyl-prolyl cis-trans isomerase A OS=Saguinus ... [more]
PPIA_MOUSE4.855e-5765.43Peptidyl-prolyl cis-trans isomerase A OS=Mus muscu... [more]
PPIA_AOTTR4.855e-5765.43Peptidyl-prolyl cis-trans isomerase A OS=Aotus tri... [more]
PPIA_BLAGE6.341e-5766.67Peptidyl-prolyl cis-trans isomerase OS=Blattella g... [more]
PPIA_FELCA8.281e-5764.81Peptidyl-prolyl cis-trans isomerase A OS=Felis cat... [more]
PPIA_RABIT1.845e-5665.43Peptidyl-prolyl cis-trans isomerase A OS=Oryctolag... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05I04_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05I04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834425 ID=CF834425; Name=CF834425; organism=Citrus sinensis; type=EST; length=727bp
TAACAAGACAAGCCCTATCTTATTTAAAAAGGCAGCTCATAGAAAGACAT
AAACCATAGTTCATCAAGAACCACCACCGGAGACCCGATCCAACCCGAAC
AAGTAACATAGCAGGAAAATTAGATAAAGATTAAAAGTCCTACAGACACG
GCCACATAATAATAGATAACATAATCACCATCACGATCGCGATCAGACGG
CTCGTGATGATGGCGATCATTATCATGATCAAATCTAAGACAATTGACCG
CAATCAGCGATCACGACGGGCTTGTTGGTCCTTCCGGAGCTGGACCCCAC
TTTCTCGATGGCCTTGACGACGTCCATTCCTTCGACGACTTGACCGAACA
CAACGTGCTTCCCATCGAGCCACTCGGTCTTGGCCGTACAGACGAAGAAC
TGAGATCCGTTGGTTCCGGGTCCGGCATTCGCCATGGAGAGGATTCCGGG
GCCGGTGTGCTTCTTCACGAAGTTCTCATCGGCGAATTTTGAGCCGTAGA
TTGATTCGCCTCCGGTTCCGTTTCCGGCGGTGAAGTCTCCCCCCTGGCAC
ATGAATCCGGGGATCACACGGTGGAAGGACGAGCCCTTGTAGTGGAGTGG
CTTGCCGGACTTGCCGATGCCTTTCTCGCCGGTGCAGAGGGCGCGGAAGT
TCTCGGCGGTTCGGGGGGTGACATCGGCGAAGAGCTCCATCACGATCCTG
CCGGCGGGCTGACCGCCGACGGTCATG
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