CF834499
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834499 vs. ExPASy Swiss-Prot
Match: RPN2_CANGA (26S proteasome regulatory subunit RPN2 OS=Candida glabrata GN=RPN2 PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 2.520e-45 Identity = 89/189 (47.09%), Postives = 135/189 (71.43%), Query Frame = 1 Query: 64 ALGFVLYSEPEQTPRIVSLLSESYNPHVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQINEANDSRVGTFRRQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTIRL-LSKTKHDKITAVVGLSVFSQFWYWYPLIYFISLAFSPTALIGL-NYDLKVPRFEFLSHAK 624 ALGFVL + PRIV LL+ES+N H R GAA A+GI+CAG GL AI +LEP+T D DFVRQ A+I++++VM+Q E + +V + +I +KH++ ++K GA +A GI++AGGRNVTI+L ++T +VVGL++F+QFWYW+P+ +F+SL+F+PT ++G+ DL +P+F+ +A+ Sbjct: 587 ALGFVLLRDYTTVPRIVQLLAESHNAHDRCGAAFALGIACAGKGLQAAIDVLEPMTKDPADFVRQAAMISLSLVMIQQTEKMNPKVASINSHFLSVITNKHQEGLAKFGACVALGIMNAGGRNVTIQLENAETGTLDTKSVVGLAMFTQFWYWFPMAHFLSLSFTPTTIVGVRGSDLNIPKFDMNCYAR 775
BLAST of CF834499 vs. ExPASy Swiss-Prot
Match: PSMD1_CAEEL (26S proteasome non-ATPase regulatory subunit 1 OS=Caenorhabditis elegans GN=rpn-2 PE=1 SV=4) HSP 1 Score: 171.014 bits (432), Expect = 4.448e-42 Identity = 80/185 (43.24%), Postives = 128/185 (69.19%), Query Frame = 1 Query: 67 LGFVLYSEPEQTPRIVSLLSESYNPHVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQINEANDSRVGTFRRQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTIRLLSKTKHDKITAVVGLSVFSQFWYWYPLIYFISLAFSPTALIGLNYDLKVPRFEFLSHA 621 +GFVL +P V++L+E +N HVRYGAA+A+GI+CAGTG EAI+L+EP+ SD FVR+GAL+++A++M Q + +V FR+QL K I +K+ED++ K GAI+A G+LD GG+N + + + K + ++VG+ F W+W+ + +FI+LA P+ L+ +N +LK+P +++ HA Sbjct: 601 IGFVLSKDPSTCLSYVAMLTEHFNGHVRYGAAMALGIACAGTGNMEAIALIEPMISDKEGFVRKGALLSLALIMCQQTDYTCPKVNGFRKQLLKKIGEKNEDSLVKFGAIIAQGLLDIGGQNAAVTMQNSDKQPDMGSMVGMMCFLHGWFWHSMHFFIALAAKPSCLVMMNENLKIPVLDYICHA 785
BLAST of CF834499 vs. ExPASy Swiss-Prot
Match: RPN2_ENCCU (26S proteasome regulatory subunit RPN2 OS=Encephalitozoon cuniculi GN=RPN2 PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.806e-20 Identity = 54/181 (29.83%), Postives = 89/181 (49.17%), Query Frame = 1 Query: 64 ALGFVLYSEPEQTPRIVSLLSESYNPHVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQINEANDSRVGTFRRQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTIRLLSKTKHDKITAVVGLSVFSQFWYWYPLIYFISLAFSPTALIGLNYDLKVPRFE 606 A+G V + + + LSE++N VR A+ +G+ +GTG ++LE L D VRQ A I + + +Q N +L ++I+DK E ++GA+L G+ + GGRN+ + + + + G +F +WYW+PLI +SL PT + N DL+ E Sbjct: 537 AIGLVCCDDRDLLVGTLEPLSENHNFFVRAAVAVVLGLFLSGTGDKVCTNILEALMYDTNSLVRQSACIGVGFITMQCNPELVPNYKRIIEKLNRLIVDKKESGAVELGAVLGRGLSEGGGRNIVFSVRNMSGITSADRIAGAVLFLHYWYWHPLISMVSLCALPTTVFCFNEDLEEEEIE 717 The following BLAST results are available for this feature:
BLAST of CF834499 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834499 ID=CF834499; Name=CF834499; organism=Citrus sinensis; type=EST; length=630bpback to top |