CF834509

Overview
NameCF834509
Unique NameCF834509
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length760
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834509 vs. ExPASy Swiss-Prot
Match: PHEA_ECOLI (P-protein OS=Escherichia coli (strain K12) GN=pheA PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.883e-24
Identity = 76/238 (31.93%), Postives = 110/238 (46.22%), Query Frame = 1
Query:    7 GSLYRNYDLLLRHRLHIVGEVQLPVHHCLLALPGVRKEYLTRVISHPQALSQCEHTLTKLGLNVAREAVDDTAGAAEYIAANDLRDTXXXXXXXXXELYGMQVLEDGIQDDSSNVTRFVMLAREPIIPRTDRPFKTSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYMFYIDFEASMAEVRAQNALAEVQEFTSFLRVLGSYPMD-MTPWSPS 717
            G++   YDLL    L IVGE+ L + HCLL         +  V SHPQ   QC   L +   +   E  + T+ A E +A                 LYG+QVLE    +   N TRFV+LAR+ I      P KT+++ A  +    L + L      N+ +T++ESRP    P              +E MFY+D +A++     Q AL E+ E T  ++VLG YP + + P  P+
Sbjct:  164 GAINDVYDLLQHTSLSIVGEMTLTIDHCLLVSGTTDLSTINTVYSHPQPFQQCSKFLNRYP-HWKIEYTESTSAAMEKVAQAKSPHVAALGSEAGGTLYGLQVLERIEANQRQNFTRFVVLARKAINVSDQVPAKTTLLMATGQQAGALVEALLVLRNHNLIMTRLESRPIHGNP--------------WEEMFYLDIQANLESAEMQKALKELGEITRSMKVLGCYPSENVVPVDPT 386          
BLAST of CF834509 vs. ExPASy Swiss-Prot
Match: PHEA_ECO57 (P-protein OS=Escherichia coli O157:H7 GN=pheA PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.883e-24
Identity = 76/238 (31.93%), Postives = 110/238 (46.22%), Query Frame = 1
Query:    7 GSLYRNYDLLLRHRLHIVGEVQLPVHHCLLALPGVRKEYLTRVISHPQALSQCEHTLTKLGLNVAREAVDDTAGAAEYIAANDLRDTXXXXXXXXXELYGMQVLEDGIQDDSSNVTRFVMLAREPIIPRTDRPFKTSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYMFYIDFEASMAEVRAQNALAEVQEFTSFLRVLGSYPMD-MTPWSPS 717
            G++   YDLL    L IVGE+ L + HCLL         +  V SHPQ   QC   L +   +   E  + T+ A E +A                 LYG+QVLE    +   N TRFV+LAR+ I      P KT+++ A  +    L + L      N+ +T++ESRP    P              +E MFY+D +A++     Q AL E+ E T  ++VLG YP + + P  P+
Sbjct:  164 GAINDVYDLLQHTSLSIVGEMTLTIDHCLLVSGTTDLSTINTVYSHPQPFQQCSKFLNRYP-HWKIEYTESTSAAMEKVAQAKSPHVAALGSEAGGTLYGLQVLERIEANQRQNFTRFVVLARKAINVSDQVPAKTTLLMATGQQAGALVEALLVLRNHNLIMTRLESRPIHGNP--------------WEEMFYLDIQANLESAEMQKALKELGEITRSMKVLGCYPSENVVPVDPT 386          
BLAST of CF834509 vs. ExPASy Swiss-Prot
Match: PHEA_BUCAP (P-protein OS=Buchnera aphidicola subsp. Schizaphis graminum GN=pheA PE=4 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.883e-24
Identity = 64/237 (27.00%), Postives = 119/237 (50.21%), Query Frame = 1
Query:    7 GSLYRNYDLLLRHRLHIVGEVQLPVHHCLLALPGVRKEYLTRVISHPQALSQCEHTLTKLGLNVAREAVDDTAGAAEYIAANDLRDTXXXXXXXXXELYGMQVLEDGIQDDSSNVTRFVMLAREPIIPRTDRPFKTSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYMFYIDFEASMAEVRAQNALAEVQEFTSFLRVLGSYPMD-MTPWSP 714
            G +   +D+L +  L I+GE+ + ++HCLLA+  +    +  V SHPQ   QC + + K   N   +  + TA A + I   ++            ++YG++VL   + +   N+TRF++L+R+P+   +  P KT+++F   + +  L +VL       + + K+ S+     P              +E MFYID +A+++    Q  L ++ + T F+++LG YP + +TP  P
Sbjct:  164 GFINEIFDILKKTNLFIIGEINISINHCLLAIKKIELNKIKAVYSHPQPFQQCSYFIKKFP-NWKIQYTNSTADAMKKIVKYNITTNAALGSELGSKIYGLKVLYKNLANKKKNITRFILLSRKPVSISSKIPTKTTLIFNTGQESGALAEVLLILKKNKLIMKKLTSQNIYKNP--------------WEEMFYIDVQANLSSSLMQETLEKIGKITKFIKILGCYPSENITPIIP 385          
BLAST of CF834509 vs. ExPASy Swiss-Prot
Match: PHEA_AQUAE (P-protein OS=Aquifex aeolicus GN=pheA PE=4 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.449e-22
Identity = 78/222 (35.14%), Postives = 109/222 (49.10%), Query Frame = 1
Query:   28 DLLLRHRLHIVGEVQLPVH-HCLLALPGVRKEYLTRVISHPQALSQCEHTLTKLGLNVAREAVDDTAGAAEYIAANDLRDTXXXXXXXXXELYGMQVLEDGIQDDSSNVTRFVMLAREPIIPRTDRPFKTSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYMFYIDFEASMAEVRAQNALAEVQEFTSFLRVLGSYP 690
            D+ L   + I GE+ +P+  H L A   +  E + +V SH  AL+QC   L K   +V    V+ TA A E IA  D R             Y + +L   IQD   N TRF+++A+  + P      KTSI+F        L+K L  F    I+LTKIESRP +               K ++Y+F++D E    E R + AL E++E T FL+VLGSYP
Sbjct:  155 DMFLESDVKIAGEIVIPITLHLLSASDSI--ENVEKVYSHKMALAQCRSWLEKNLPSVQVIEVESTAKACE-IALEDER-AGAVASEVAAYTYHLNILARNIQDSGDNFTRFLVIAKRDLKPTGSD--KTSILFGVKDEPGALYKALEVFYKHGINLTKIESRPSKK--------------KAWDYVFFVDLEGHKEEERVEKALKELKEKTQFLKVLGSYP 356          
BLAST of CF834509 vs. ExPASy Swiss-Prot
Match: PHEA_NEIG1 (P-protein OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=pheA PE=4 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 1.893e-22
Identity = 71/228 (31.14%), Postives = 106/228 (46.49%), Query Frame = 1
Query:    7 GSLYRNYDLLLRHRLHIVGEVQLPVHHCLLALPGVRKEYLTRVISHPQALSQCEHTLTKLGLNVAREAVDDTAGAAEYIAANDLRDTXXXXXXXXXELYGMQVLEDGIQDDSSNVTRFVMLAREPIIPRTDRPFKTSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYMFYIDFEASMAEVRAQNALAEVQEFTSFLRVLGSYP 690
            GS+ R  DLL    L   GEV L +HH LL       E + +V SH QAL+QC   L +   N  R AV   A AA  +A +D             E+YG+ ++ + I+D+ +N TRF+++             KTS+  +       +  +L       IS+TK ESRP +              +  +EY+F+ID E    + + Q AL  + E  SF++ +GSYP
Sbjct:  147 GSVGRTLDLLAVTALQACGEVVLRIHHNLLRKNNGSTEGIAKVFSHAQALAQCNDWLGRRLPNAERIAVSSNAEAARLVAESDDGTVAAIAGRTAAEIYGLDMVAECIEDEPNNTTRFLVMGHHE--TGASGSDKTSLAVSAPNRAGAVASLLQPLTESGISMTKFESRPSK--------------SVLWEYLFFIDIEGHRRDAQIQTALERLGERASFVKAIGSYP 358          
BLAST of CF834509 vs. ExPASy Swiss-Prot
Match: PHEA_PSEST (P-protein OS=Pseudomonas stutzeri GN=pheA PE=4 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 4.662e-21
Identity = 70/228 (30.70%), Postives = 110/228 (48.25%), Query Frame = 1
Query:    7 GSLYRNYDLLLRHRLHIVGEVQLPVHHCLLALPGVRKEYLTRVISHPQALSQCEHTLTKLGLNVAREAVDDTAGAAEYIAANDLRDTXXXXXXXXXELYGMQVLEDGIQDDSSNVTRFVMLAREPIIPRTDRPFKTSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYMFYIDFEASMAEVRAQNALAEVQEFTSFLRVLGSYP 690
            G++    D  L H + I GEV+L +HH LL     + + +TR+ SH Q+L+QC   L     NV R AV   A AA+ + +    ++         +LYG+  L + I+D   N TRF+++  + + P  D   KTSI+ +       L ++L  F    I LT+IE+RP R              +  + Y+F+ID      +   +N L ++      L+VLGSYP
Sbjct:  152 GAVNHTLDSFLEHDIVICGEVELRIHHHLLVGETTKTDRITRIYSHAQSLAQCRKWLDAHYPNVERVAVSSNADAAKRVKSE--WNSAAIAGDMAAQLYGLSKLAEKIEDRPVNSTRFLIIGSQEVPPTGDD--KTSIIVSMRNKPGALHELLMPFHSNGIDLTRIETRPSR--------------SGKWTYVFFIDCMGHHQDPLIKNVLEKIGHEAVALKVLGSYP 361          
BLAST of CF834509 vs. ExPASy Swiss-Prot
Match: PHEA_BUCAI (P-protein OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=pheA PE=4 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.952e-21
Identity = 62/240 (25.83%), Postives = 117/240 (48.75%), Query Frame = 1
Query:    7 GSLYRNYDLLLRHRLHIVGEVQLPVHHCLLALPGVRKEYLTRVISHPQALSQCEHTLTKL---GLNVAREAVDDTAGAAEYIAANDLRDTXXXXXXXXXELYGMQVLEDGIQDDSSNVTRFVMLAREPIIPRTDRPFKTSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYMFYIDFEASMAEVRAQNALAEVQEFTSFLRVLGSYPMD-MTPWSP 714
            GS+   +D+L +  L I+GE+ + ++H LL L  +    +  + SHPQ   QC   + K     +   +   D      +Y   ND+ +          ++YG+++L   + +  +N+TRF++L R P     + P  T+++F   +    L KVLS    + + + K+ S+     P              +E MFYID + +++    Q+AL ++++ T F+++LG YP + +TP +P
Sbjct:  164 GSINEVFDILKKTNLFIIGEINIFINHNLLTLKKIELNKIKTIYSHPQPFQQCSDFIKKFPEWKIKYTKSTADAMKKIKKY---NDVTNA-ALGSEIGSKIYGLEILMKNLANKENNITRFILLNRNPKKISKNIPTTTTLIFTTGQEAGSLSKVLSILQEKKLIMKKLTSQKIYKNP--------------WEEMFYIDIQVNLSSTLMQDALEKIKKITRFIKILGCYPSEKITPIAP 385          
BLAST of CF834509 vs. ExPASy Swiss-Prot
Match: PHEA_PSEAE (P-protein OS=Pseudomonas aeruginosa GN=pheA PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.039e-20
Identity = 69/228 (30.26%), Postives = 110/228 (48.25%), Query Frame = 1
Query:    7 GSLYRNYDLLLRHRLHIVGEVQLPVHHCLLALPGVRKEYLTRVISHPQALSQCEHTLTKLGLNVAREAVDDTAGAAEYIAANDLRDTXXXXXXXXXELYGMQVLEDGIQDDSSNVTRFVMLAREPIIPRTDRPFKTSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYMFYIDFEASMAEVRAQNALAEVQEFTSFLRVLGSYP 690
            G++    D  L H + I GEV+L +HH LL     + + +TR+ SH Q+L+QC   L     +V R AV   A AA+ + +    ++          LY +  L + I+D   N TRF+++  + + P  D   KTSI+ +       L ++L  F    I LT+IE+RP R              +  + Y+F+IDF     E   ++ L ++ +    L+VLGSYP
Sbjct:  152 GAVNHTLDSFLEHDMVICGEVELRIHHHLLVGETTKTDNITRIYSHAQSLAQCRKWLDSHYPSVERVAVSSNADAAKRVKSE--WNSAAIAGDMAASLYDLSKLHEKIEDRPDNSTRFLIIGNQEVPPTGDD--KTSIIVSMRNKPGALHELLVPFHNNGIDLTRIETRPSR--------------SGKWTYVFFIDFVGHHKEPLIKDVLEKIGQEAVALKVLGSYP 361          
BLAST of CF834509 vs. ExPASy Swiss-Prot
Match: PHEA_BACSU (Prephenate dehydratase OS=Bacillus subtilis GN=pheA PE=4 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.270e-18
Identity = 72/239 (30.13%), Postives = 118/239 (49.37%), Query Frame = 1
Query:    1 LGGSLYRNYDLLLRHR-LHIVGEVQLPVHHCLLALPGVRKEY--LTRVISHPQALSQCEHTLTKLGLNVAREAVDDTAGAAEYIAANDLRDTXXXXXXXXXELYGMQVLEDGIQDDSSNVTRFVMLAREPIIP------RTDRPFKTSIVFA-HDKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYMFYIDFEASMAEVRAQNALAEVQEFTSFLRVLGSY 687
            L GS+    D L+  + L IVGE+ LP+H  LL  P     +  L ++ SH  A++QC   L +   +V  E  + T  AA++++ +   +            Y +++++  IQD   N TRFV+L+ +  I        + RP  T +V    D  +  L +VLSAF++RN++L+KIESRP +           +G      Y F ID E +  +V    A+ E++     +R+LG+Y
Sbjct:   56 LEGSVNLTIDYLIHEQPLPIVGEMTLPIHQHLLVHPSRENAWKELDKIYSHSHAIAQCHKFLHRHFPSVPYEYANSTGAAAKFVSDHPELNIGVIANDMAASTYELKIVKRDIQDYRDNHTRFVILSPDENISFEVNSKLSSRPKTTLMVMLPQDDQSGALHRVLSAFSWRNLNLSKIESRPTK---------TGLG-----HYFFIIDIEKAFDDVLIPGAMQELEALGCKVRLLGAY 280          
BLAST of CF834509 vs. ExPASy Swiss-Prot
Match: PHEA_AMYME (Prephenate dehydratase OS=Amycolatopsis methanolica GN=pheA PE=4 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.702e-16
Identity = 68/211 (32.23%), Postives = 99/211 (46.92%), Query Frame = 1
Query:   58 VGEVQLPVHHCLLALPGVRKEYLTRVISHPQALSQCEHTLTKLGLNVAREAVDDTAGAAEYIAANDLRDTXXXXXXXXXELYGMQVLEDGIQDDSSNVTRFVMLAREPII-PRTDRPFKTSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYMFYIDFEASMAEVRAQNALAEVQEFTSFLRVLGSY 687
            V E  LPVH  +L    V +  +  V SHP AL+Q    L          A   TA AA  + A +             E Y ++VL   + D     TRF+++ R P++ P      +TSIV A    T  L ++L+  A R I+LT++++RPH+          N G     EY F+IDFE  +AE R  +ALA ++     +R LGS+
Sbjct:   77 VAEALLPVHFSVLTRDDVGE--IRTVASHPHALAQVRKWLEDNLPGARVVAAGSTAAAAVAVQAGEF--DAAVTAPVAVEHYPLKVLATEVADVRDARTRFLLMRRPPVVLPEPTGADRTSIVAAAANRTGTLAELLTELATRGINLTRLDARPHKQ---------NFG-----EYRFFIDFEGHVAEPRIADALAALRRRCRDVRFLGSF 269          
The following BLAST results are available for this feature:
BLAST of CF834509 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
PHEA_ECOLI5.883e-2431.93P-protein OS=Escherichia coli (strain K12) GN=pheA... [more]
PHEA_ECO575.883e-2431.93P-protein OS=Escherichia coli O157:H7 GN=pheA PE=3... [more]
PHEA_BUCAP5.883e-2427.00P-protein OS=Buchnera aphidicola subsp. Schizaphis... [more]
PHEA_AQUAE1.449e-2235.14P-protein OS=Aquifex aeolicus GN=pheA PE=4 SV=1[more]
PHEA_NEIG11.893e-2231.14P-protein OS=Neisseria gonorrhoeae (strain ATCC 70... [more]
PHEA_PSEST4.662e-2130.70P-protein OS=Pseudomonas stutzeri GN=pheA PE=4 SV=... [more]
PHEA_BUCAI7.952e-2125.83P-protein OS=Buchnera aphidicola subsp. Acyrthosip... [more]
PHEA_PSEAE1.039e-2030.26P-protein OS=Pseudomonas aeruginosa GN=pheA PE=3 S... [more]
PHEA_BACSU1.270e-1830.13Prephenate dehydratase OS=Bacillus subtilis GN=phe... [more]
PHEA_AMYME7.702e-1632.23Prephenate dehydratase OS=Amycolatopsis methanolic... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05K10_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05K10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834509 ID=CF834509; Name=CF834509; organism=Citrus sinensis; type=EST; length=760bp
CTAGGCGGATCTCTCTACCGGAACTACGACCTCCTCCTCCGCCACCGGCT
TCACATCGTCGGAGAAGTTCAGCTCCCGGTTCACCACTGTCTCTTGGCCT
TGCCTGGCGTCCGCAAAGAGTACCTCACGCGCGTGATTTCACATCCGCAG
GCGCTCTCCCAGTGCGAGCACACTCTGACGAAGCTAGGGCTCAACGTCGC
ACGGGAGGCCGTCGACGACACGGCCGGAGCTGCCGAGTACATCGCCGCCA
ATGACCTCCGCGACACCGCGGCAATAGCCTCCGCACGCGCCGCCGAATTG
TACGGAATGCAAGTCCTGGAGGATGGGATACAGGACGATTCGAGTAACGT
GACTCGGTTCGTGATGTTGGCGCGTGAGCCGATAATCCCGCGCACGGATC
GGCCGTTCAAGACGAGTATCGTGTTCGCGCACGACAAGGGGACGAGTGTG
TTGTTTAAGGTGTTGTCGGCGTTCGCGTTCAGGAACATAAGTTTGACGAA
GATAGAGTCGCGGCCGCACCGGAACCGCCCGATCAGGCTGGTTGACGATG
CGAATGTGGGGACGGCCAAGCACTTCGAGTACATGTTTTACATTGATTTC
GAAGCCTCGATGGCTGAGGTTAGGGCGCAGAATGCGCTGGCGGAGGTCCA
GGAATTCACGTCGTTTTTGAGGGTGTTGGGGAGTTATCCTATGGACATGA
CCCCATGGAGCCCGTCTAGGGGAGAATAATGAACATAAAATTATTAGCTA
TTTTATTTTA
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