CF834509

Overview
NameCF834509
Unique NameCF834509
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length760
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834509 vs. ExPASy Swiss-Prot
Match: PHEA_LACLM (Prephenate dehydratase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=pheA PE=4 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.236e-14
Identity = 63/214 (29.44%), Postives = 100/214 (46.73%), Query Frame = 1
Query:   55 IVGEVQLPVHHCLLALPGVRKEYLTRVISHPQALSQCEHTLTKLGLNVAREAVDDTAGAAEYIAANDLRDTXXXXXXXXXELYGMQVLEDGIQDDSSNVTRFVMLAREP--IIPRTDRPFKTSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYMFYIDFEASMA-EVRAQNALAEVQEFTSFLRVLGSY 687
            +V E  LP+   LLA+   +++ +  + SHPQAL+Q    L K       E  + T+ AAE++  N              ++Y ++ + + IQD + N TRF +L +E         +   T  +   D     L K +S FA+R+I +TKIESRP R R         +G     +Y F ID E +    ++   AL E+      +R+LG+Y
Sbjct:   74 VVAEFVLPISQNLLAVS--KEQKIEHIYSHPQALAQTRVYLRKFYPQAQVEITESTSAAAEFVKNNPDLPAAAVANSFAAKMYDLEFIAENIQDLAGNSTRFWLLGKEKQSFDLNQTKDKVTLALTLPDNLPGALHKAISVFAWRDIDMTKIESRPLRTR---------LG-----QYFFIIDLENNATNSLKIPYALEELAGLGVNVRLLGNY 271          
BLAST of CF834509 vs. ExPASy Swiss-Prot
Match: PHEA_LACLA (Prephenate dehydratase OS=Lactococcus lactis subsp. lactis GN=pheA PE=4 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.970e-13
Identity = 63/215 (29.30%), Postives = 99/215 (46.05%), Query Frame = 1
Query:   55 IVGEVQLPVHHCLLALPGVRKEYLTRVISHPQALSQCEHTLTKLGLNVAREAVDDTAGAAEYIAANDLRDTXXXXXXXXXELYGMQVLEDGIQDDSSNVTRFVMLAREPI---IPRTDRPFKTSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYMFYIDF-EASMAEVRAQNALAEVQEFTSFLRVLGSY 687
            +V E  LP+   LLAL    K  +  + SHPQAL+Q  + L +       E  D T+ AAE++  +              ++Y ++++   IQD + N TRF +L +E     + +T      ++    D     L K +S FA+R+I +TKIESRP R R         +G     +Y F ID        ++   AL E+      +R+LG+Y
Sbjct:   74 VVAEFVLPISQNLLALSKEGK--IEHIYSHPQALAQTRNYLREHYPQAKVEITDSTSAAAEFVKNHPDLPIAAVANSYAAKMYDLEIVAKNIQDLAGNSTRFWLLGKEKKSFDLLKTGEKVSLALTLP-DNLPGALHKAISVFAWRDIDMTKIESRPLRTR---------LG-----QYFFNIDLVNNEKNNLKIPYALEELSGLGVKVRLLGNY 271          
BLAST of CF834509 vs. ExPASy Swiss-Prot
Match: PHEA_MYCGI (Prephenate dehydratase OS=Mycobacterium gilvum (strain PYR-GCK) GN=pheA PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.359e-12
Identity = 64/218 (29.36%), Postives = 92/218 (42.20%), Query Frame = 1
Query:   49 LHIVGEVQLPVHHCLLALPGVRKEYLTRVISHPQALSQCEHTLTKLGLNVAREAVDDTAGAAEYIAANDLRDTXXXXXXXXXELYGMQVLEDGIQDDSSNVTRFVMLAREPIIPRTDRPFKTSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYMFYIDFEASMAEVRAQNALAEVQEFTSFLRVLGSYPMDMT 702
            L I  E+ L V   +   PGV    +  V + P A +Q +  L++   NV     +  A AA  +A  D R           E YG+  L  GI D+ +  TRFV++      P+     +TS+V   D     L   ++  A R I LT IESRP R           +GT     Y FY+DF   + +     AL  +    + +R LGS+P   T
Sbjct:   85 LQIYAELTLDVSFTIAVRPGVTAADVRTVAAFPVAAAQVKRWLSENLPNVELVPSNSNAAAARDVA--DGRAEAAVSTALATERYGLDTLAAGIVDEPNARTRFVLVGCPGPPPKRTGSDRTSVVLRLDNVPGALVTAMNELAIRGIDLTGIESRPTR---------TELGT-----YRFYLDFVGHIDDDAVAGALRALHRRCADVRYLGSWPTGET 286          
BLAST of CF834509 vs. ExPASy Swiss-Prot
Match: PHEA_MYCVP (Prephenate dehydratase OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=pheA PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.963e-11
Identity = 57/214 (26.64%), Postives = 90/214 (42.06%), Query Frame = 1
Query:   49 LHIVGEVQLPVHHCLLALPGVRKEYLTRVISHPQALSQCEHTLTKLGLNVAREAVDDTAGAAEYIAANDLRDTXXXXXXXXXELYGMQVLEDGIQDDSSNVTRFVMLAREPIIPRTDRPFKTSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYMFYIDFEASMAEVRAQNALAEVQEFTSFLRVLGSYP 690
            L I  E+ L V   +   PG     +  V ++P A +Q    L            +  A AA+ +AA   R           + YG++ L   + D+ +  TRFV++ R    P+     +TS+V   D     L   ++  A R+I LT+IESRP R           +GT     Y F++DF   + +     AL  +    + +R LGS+P
Sbjct:   88 LQIYAELTLDVSFTIAVRPGTAAADVRTVAAYPVAAAQVRRWLAAHLPEAEVVPANSNAAAAQDVAAG--RADAGVSTALATQRYGLEALAADVVDEPNARTRFVLVGRPGPPPKCTGADRTSVVLQLDNVPGALVSAMTELAVRDIDLTRIESRPTR---------TGLGT-----YKFFLDFVGHIEDPPVAEALRALHRRCADVRYLGSWP 285          
BLAST of CF834509 vs. ExPASy Swiss-Prot
Match: PHEA_MYCMM (Prephenate dehydratase OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=pheA PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.564e-11
Identity = 66/236 (27.97%), Postives = 99/236 (41.95%), Query Frame = 1
Query:    1 LGGSLYRNYD-LLLRHRLHIVGEVQLPVHHCLLALPGVRKEYLTRVISHPQALSQCEHTLTKLGLNVAREAVDDTAGAAEYIAANDLRDTXXXXXXXXXELYGMQVLEDGIQDDSSNVTRFVMLARE-PIIPRTDRPFKTSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYMFYIDFEASMAEVRAQNALAEVQEFTSFLRVLGSYPMDMT 702
            + GSL    D L +   L +  E  L V   ++  PGV    +  + + P A +Q    LT    +V        A AA  +A   +              + +Q L DG+ D+S+  TRF+++    P  PRT    +TS+V         L   L+ F  R I LT+IESRP R           +GT     YMF++D    +A+     AL  +    + +R LGS+P   T
Sbjct:   66 IDGSLAPTLDSLAIGSPLQVFAETTLDVAFSIVVRPGVGAADVRTLAAFPVAAAQVRQWLTAHLPSVELHPAYSNADAARQVAEGQVDAAVTSPLAAAH--WALQSLADGVVDESNARTRFLLIGVPGPPPPRTGTD-RTSVVLRIANVPGALLDALTEFGMRGIDLTRIESRPTR---------TGLGT-----YMFFVDCVGHIADDAVAEALKALHRRCADVRYLGSWPTGQT 284          
BLAST of CF834509 vs. ExPASy Swiss-Prot
Match: PHEA_MYCUA (Prephenate dehydratase OS=Mycobacterium ulcerans (strain Agy99) GN=pheA PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.373e-11
Identity = 67/236 (28.39%), Postives = 97/236 (41.10%), Query Frame = 1
Query:    1 LGGSLYRNYD-LLLRHRLHIVGEVQLPVHHCLLALPGVRKEYLTRVISHPQALSQCEHTLTKLGLNVAREAVDDTAGAAEYIAANDLRDTXXXXXXXXXELYGMQVLEDGIQDDSSNVTRFVMLARE-PIIPRTDRPFKTSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYMFYIDFEASMAEVRAQNALAEVQEFTSFLRVLGSYPMDMT 702
            + GSL    D L +   L +  E  L V   ++  PGV    +  + + P A +Q    LT    NV        A  A  +A   +              + +Q L DG+ D+S+  TRF+++    P  PRT    +TS V         L   L+ F  R I LT+IESRP R           +GT     YMF+ID    +A+     AL  +    + +R LGS+P   T
Sbjct:   66 IDGSLAPTLDSLAIGSPLQVFAETTLDVAFSIVVKPGVGAADVRTLAAFPVAAAQVRQWLTAHLPNVELHPAYSNADGARQVAEGQVDAAVTSPLAAAH--WALQSLADGVVDESNARTRFLLIGVPGPPPPRTGTD-RTSAVLRIANVPGALLDALTEFGMRGIDLTRIESRPTR---------TGLGT-----YMFFIDCVGHIADDAVAEALKALHRRCADVRYLGSWPTGQT 284          
BLAST of CF834509 vs. ExPASy Swiss-Prot
Match: PHEA_MYCA9 (Prephenate dehydratase OS=Mycobacterium abscessus (strain ATCC 19977 / DSM 44196) GN=pheA PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.373e-11
Identity = 59/218 (27.06%), Postives = 87/218 (39.91%), Query Frame = 1
Query:   49 LHIVGEVQLPVHHCLLALPGVRKEYLTRVISHPQALSQCEHTLTKLGLNVAREAVDDTAGAAEYIAANDLRDTXXXXXXXXXELYGMQVLEDGIQDDSSNVTRFVMLAREPIIPRTDRPFKTSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYMFYIDFEASMAEVRAQNALAEVQEFTSFLRVLGSYPMDMT 702
            L I  E  LPV   +   PG     +  V   P A +Q    L     +    A +  A AAE + A   R           +  G+  L  G+ D++   TRFV++ R    P      +TS+V         L   ++ FA R+I LT+IESRP R           +GT     Y F++D    + ++    AL  +      +R LGS+P   T
Sbjct:   81 LQIFAETVLPVSFTIAVRPGTAAGDVKTVAGFPIAAAQVREWLATNLPDAELVAANSNAAAAEDVKAE--RADAGVCTEWAAQRLGLHALASGVVDEAHAHTRFVLVGRPGPPPAATGADRTSVVLGLGNVPGALAAAMNEFAIRDIDLTRIESRPTR---------TGLGT-----YRFFLDCVGHIDDIAVGEALKGLHRRCEDVRYLGSWPRGTT 282          
BLAST of CF834509 vs. ExPASy Swiss-Prot
Match: PHA2_SCHPO (Putative prephenate dehydratase OS=Schizosaccharomyces pombe GN=pha2 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.743e-11
Identity = 52/176 (29.55%), Postives = 86/176 (48.86%), Query Frame = 1
Query:    7 GSLYRNYDLLL-RHRLHIVGEVQLPVHHCLLALPGVRKEYLTRVISHPQALSQCEHTLTKLGLNVAREAVDDTAGAAEYIAANDLRDTXXXXXXXXXELYG-MQVLEDGIQDDSSNVTRFVMLA----REPIIPRTDRPFKTSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRP 516
            G++   YDLL  R  +  VGEV +P HHC++   G   E + +++SHPQA  QC   ++    N    +V  T+ AA  +A+ D+  T          +     +L   I+DDS+N TRF++L     ++ + P  ++        +H K  S +F+V   FA   + +T +  RP
Sbjct:   75 GAVIPAYDLLKGRDDIQAVGEVLVPAHHCII---GKSLENVQKILSHPQAFGQCSKWISANVPNAEFVSVSSTSQAAA-LASKDITGTIVAISSELCAVENQFNLLVKNIEDDSNNRTRFLLLRSGGFQDDLSPLKEKSL-LQFYLSHPKKLSAVFEV---FAAHKVVITNLVVRP 242          
The following BLAST results are available for this feature:
BLAST of CF834509 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
PHEA_LACLM3.236e-1429.44Prephenate dehydratase OS=Lactococcus lactis subsp... [more]
PHEA_LACLA7.970e-1329.30Prephenate dehydratase OS=Lactococcus lactis subsp... [more]
PHEA_MYCGI1.359e-1229.36Prephenate dehydratase OS=Mycobacterium gilvum (st... [more]
PHEA_MYCVP1.963e-1126.64Prephenate dehydratase OS=Mycobacterium vanbaaleni... [more]
PHEA_MYCMM2.564e-1127.97Prephenate dehydratase OS=Mycobacterium marinum (s... [more]
PHEA_MYCUA4.373e-1128.39Prephenate dehydratase OS=Mycobacterium ulcerans (... [more]
PHEA_MYCA94.373e-1127.06Prephenate dehydratase OS=Mycobacterium abscessus ... [more]
PHA2_SCHPO9.743e-1129.55Putative prephenate dehydratase OS=Schizosaccharom... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05K10_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05K10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834509 ID=CF834509; Name=CF834509; organism=Citrus sinensis; type=EST; length=760bp
CTAGGCGGATCTCTCTACCGGAACTACGACCTCCTCCTCCGCCACCGGCT
TCACATCGTCGGAGAAGTTCAGCTCCCGGTTCACCACTGTCTCTTGGCCT
TGCCTGGCGTCCGCAAAGAGTACCTCACGCGCGTGATTTCACATCCGCAG
GCGCTCTCCCAGTGCGAGCACACTCTGACGAAGCTAGGGCTCAACGTCGC
ACGGGAGGCCGTCGACGACACGGCCGGAGCTGCCGAGTACATCGCCGCCA
ATGACCTCCGCGACACCGCGGCAATAGCCTCCGCACGCGCCGCCGAATTG
TACGGAATGCAAGTCCTGGAGGATGGGATACAGGACGATTCGAGTAACGT
GACTCGGTTCGTGATGTTGGCGCGTGAGCCGATAATCCCGCGCACGGATC
GGCCGTTCAAGACGAGTATCGTGTTCGCGCACGACAAGGGGACGAGTGTG
TTGTTTAAGGTGTTGTCGGCGTTCGCGTTCAGGAACATAAGTTTGACGAA
GATAGAGTCGCGGCCGCACCGGAACCGCCCGATCAGGCTGGTTGACGATG
CGAATGTGGGGACGGCCAAGCACTTCGAGTACATGTTTTACATTGATTTC
GAAGCCTCGATGGCTGAGGTTAGGGCGCAGAATGCGCTGGCGGAGGTCCA
GGAATTCACGTCGTTTTTGAGGGTGTTGGGGAGTTATCCTATGGACATGA
CCCCATGGAGCCCGTCTAGGGGAGAATAATGAACATAAAATTATTAGCTA
TTTTATTTTA
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