CF834511

Overview
NameCF834511
Unique NameCF834511
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length533
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834511 vs. ExPASy Swiss-Prot
Match: PME17_ARATH (Probable pectinesterase/pectinesterase inhibitor 17 OS=Arabidopsis thaliana GN=PME17 PE=2 SV=2)

HSP 1 Score: 174.481 bits (441), Expect = 2.827e-43
Identity = 83/146 (56.85%), Postives = 104/146 (71.23%), Query Frame = 1
Query:    1 ARKPLLKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 438
            AR+P  K +N +TAQGR+DPNQNTG  I    V A+SDL PV GS ++YLGRPW++YSRTV M++ +   IDP GW EW G+FALKTL+Y E+ N GPGA TS RV WPG+ V+    EA KFTV   + GGSW+ S+ V +T GL
Sbjct:  368 ARRPRSK-TNTITAQGRSDPNQNTGIIIHNSRVTAASDLRPVLGSTKTYLGRPWRQYSRTVFMKTSLDSLIDPRGWLEWDGNFALKTLFYAEFQNTGPGASTSGRVTWPGFRVLGSASEASKFTVGTFLAGGSWIPSS-VPFTSGL 511          
BLAST of CF834511 vs. ExPASy Swiss-Prot
Match: PME32_ARATH (Probable pectinesterase/pectinesterase inhibitor 32 OS=Arabidopsis thaliana GN=PME32 PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 4.821e-43
Identity = 80/146 (54.79%), Postives = 102/146 (69.86%), Query Frame = 1
Query:    1 ARKPLLKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 438
            A++ L  Q N +TAQGR DPN+ TG +IQ   + A +DL     +  +YLGRPWK YSRTV MQ+++ D I+P GW EW+G+FAL TLYYGEY+N GPGA   +RVKWPGYHV+    EA  FTV++LI G  WL STG+ +  GL
Sbjct:  380 AKQGLPNQKNSITAQGRKDPNEPTGFTIQFSNIAADTDLLLNLNTTATYLGRPWKLYSRTVFMQNYMSDAINPVGWLEWNGNFALDTLYYGEYMNSGPGASLDRRVKWPGYHVLNTSAEANNFTVSQLIQGNLWLPSTGITFIAGL 525          
BLAST of CF834511 vs. ExPASy Swiss-Prot
Match: PME41_ARATH (Probable pectinesterase/pectinesterase inhibitor 41 OS=Arabidopsis thaliana GN=PME41 PE=2 SV=2)

HSP 1 Score: 172.94 bits (437), Expect = 8.224e-43
Identity = 79/145 (54.48%), Postives = 100/145 (68.97%), Query Frame = 1
Query:    4 RKPLLKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 438
            R+P+  Q N +TAQGRTDPNQNTG SI  C +  + DL     ++++YLGRPWKEYSRTV MQS+I + ++P GW EW+GDFAL TLYY EY N G G+ T+ RV WPGYHVI +  +A  FTV   + G  W+  +GV Y  GL
Sbjct:  428 RQPMQNQFNAITAQGRTDPNQNTGISIHNCTIKPADDLVSSNYTVKTYLGRPWKEYSRTVFMQSYIDEVVEPVGWREWNGDFALSTLYYAEYNNTGSGSSTTDRVVWPGYHVI-NSTDANNFTVENFLLGDGWMVQSGVPYISGL 571          
BLAST of CF834511 vs. ExPASy Swiss-Prot
Match: PME44_ARATH (Probable pectinesterase/pectinesterase inhibitor 44 OS=Arabidopsis thaliana GN=PME44 PE=2 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 2.393e-42
Identity = 77/146 (52.74%), Postives = 104/146 (71.23%), Query Frame = 1
Query:    1 ARKPLLKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 438
            A++ L  Q N +TAQGR D NQ +G SIQ   + A +DL P   + R+YLGRPWK YSRTV +++++ D + P GW EW+ DFAL TL+YGE++N GPG+G S RVKWPGYHV  + ++A  FTV++ I G  WL STGV +++GL
Sbjct:  378 AKRGLPNQKNTITAQGRKDVNQPSGFSIQFSNISADADLVPYLNTTRTYLGRPWKLYSRTVFIRNNMSDVVRPEGWLEWNADFALDTLFYGEFMNYGPGSGLSSRVKWPGYHVFNNSDQANNFTVSQFIKGNLWLPSTGVTFSDGL 523          
BLAST of CF834511 vs. ExPASy Swiss-Prot
Match: PME16_ARATH (Probable pectinesterase/pectinesterase inhibitor 16 OS=Arabidopsis thaliana GN=PME16 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.393e-42
Identity = 86/146 (58.90%), Postives = 98/146 (67.12%), Query Frame = 1
Query:    1 ARKPLLKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 438
            ARKPL  Q N VTAQGR++P QNTG +IQ C + A S          +YLGRPWKEYSRTVVMQS IG  I P+GWS WSG F LK+L+YGEY N GPG+  S RVKW G H      EA+KFTVA  I G  WL STGV++  GL
Sbjct:  380 ARKPLPGQRNFVTAQGRSNPGQNTGIAIQNCRITAES---------MTYLGRPWKEYSRTVVMQSFIGGSIHPSGWSPWSGGFGLKSLFYGEYGNSGPGSSVSGRVKWSGCHPSLTVTEAEKFTVASFIDGNIWLPSTGVSFDPGL 516          
BLAST of CF834511 vs. ExPASy Swiss-Prot
Match: PME33_ARATH (Probable pectinesterase/pectinesterase inhibitor 33 OS=Arabidopsis thaliana GN=PME33 PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 4.513e-41
Identity = 77/147 (52.38%), Postives = 103/147 (70.07%), Query Frame = 1
Query:    4 RKPLLKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEW--SGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 438
            R+PL  Q+N++TAQGR DP QNTG +I    +IA+SDL+PV  + ++YLGRPW+ YSR  +M+++I + I P GWS W    +FAL T++YGEY N GPG+ T  RV+W G+H IT    A +FTV  LI GGSWL +TGV +  GL
Sbjct:  448 RRPLHGQANIITAQGRGDPFQNTGITIHSSRIIAASDLKPVIRAYKTYLGRPWQAYSRVTIMKTYIDNSISPLGWSPWLRGSNFALNTVFYGEYKNFGPGSSTRWRVRWKGFHAITSTAVASRFTVGSLIAGGSWLPATGVPFKSGL 594          
BLAST of CF834511 vs. ExPASy Swiss-Prot
Match: PME19_ARATH (Probable pectinesterase/pectinesterase inhibitor 19 OS=Arabidopsis thaliana GN=PME19 PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 5.894e-41
Identity = 77/146 (52.74%), Postives = 106/146 (72.60%), Query Frame = 1
Query:    1 ARKPLLKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 438
            AR+P + QSN++TAQ R   +  +G +IQKC + ASSDL+    ++++YLGRPW+ +S   VMQS IGD +DPAGW+ W G+  L TL+Y EY NRGPGA TS+RVKW G+ V+ DP++A +FTVA+L+ G +WLK T + Y  GL
Sbjct:  381 ARQPKMGQSNVITAQSRAFKDIYSGFTIQKCNITASSDLDTT--TVKTYLGRPWRIFSTVAVMQSFIGDLVDPAGWTPWEGETGLSTLHYREYQNRGPGAVTSRRVKWSGFKVMKDPKQATEFTVAKLLDGETWLKETRIPYESGL 524          
BLAST of CF834511 vs. ExPASy Swiss-Prot
Match: PME42_ARATH (Probable pectinesterase/pectinesterase inhibitor 42 OS=Arabidopsis thaliana GN=PME42 PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 2.240e-40
Identity = 75/146 (51.37%), Postives = 104/146 (71.23%), Query Frame = 1
Query:    1 ARKPLLKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 438
            AR+P + QSN +TAQ R   +  +G SIQ C + ASSDL+    ++++YLGRPW+ +S   V+QS IGD +DPAGW+ W G+  L TL+Y EY NRGPGA TS+RVKW G+ V+ DP++A +FTVA+L+ G +WLK + + Y  GL
Sbjct:  381 ARQPNMGQSNFITAQSRETKDDKSGFSIQNCNITASSDLDTA--TVKTYLGRPWRIFSTVAVLQSFIGDLVDPAGWTPWEGETGLSTLHYREYQNRGPGAVTSRRVKWSGFKVMKDPKQATEFTVAKLLDGETWLKESRIPYKSGL 524          
BLAST of CF834511 vs. ExPASy Swiss-Prot
Match: PME30_ARATH (Probable pectinesterase 30 OS=Arabidopsis thaliana GN=PME30 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 2.925e-40
Identity = 74/146 (50.68%), Postives = 104/146 (71.23%), Query Frame = 1
Query:    1 ARKPLLKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 438
            AR+P + QSN++TAQ R   +  +G SIQ C +  SSDL+    ++++YLGRPW+ +S   V+QS IGD +DPAGW+ W G+  L TL+Y EY NRGPGA TS+RVKW G+ V+ DP++A +FTVA+L+ G +WLK + + Y  GL
Sbjct:  354 ARQPKMGQSNVITAQSRATKDVKSGFSIQNCNITTSSDLDTA--TVKTYLGRPWRRFSTVAVLQSFIGDLVDPAGWTPWKGETGLSTLHYREYQNRGPGAVTSRRVKWSGFKVMKDPKKATEFTVAKLLDGETWLKESRIPYESGL 497          
BLAST of CF834511 vs. ExPASy Swiss-Prot
Match: PME35_ARATH (Probable pectinesterase/pectinesterase inhibitor 35 OS=Arabidopsis thaliana GN=PME35 PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 4.989e-40
Identity = 80/137 (58.39%), Postives = 92/137 (67.15%), Query Frame = 1
Query:   28 NMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 438
            N VTAQGR+DPNQNTG SI  C +          GS ++YLGRPWK+YSRTVVMQS I   I P+GWS WS +FALKTLYYGE+ N GPG+  S RV W GYH      EA+ FTV+  I G SWL STGV +  GL
Sbjct:  401 NYVTAQGRSDPNQNTGISIHNCRIT---------GSTKTYLGRPWKQYSRTVVMQSFIDGSIHPSGWSPWSSNFALKTLYYGEFGNSGPGSSVSGRVSWAGYHPALTLTEAQGFTVSGFIDGNSWLPSTGVVFDSGL 528          
The following BLAST results are available for this feature:
BLAST of CF834511 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
PME17_ARATH2.827e-4356.85Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME32_ARATH4.821e-4354.79Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME41_ARATH8.224e-4354.48Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME44_ARATH2.393e-4252.74Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME16_ARATH2.393e-4258.90Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME33_ARATH4.513e-4152.38Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME19_ARATH5.894e-4152.74Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME42_ARATH2.240e-4051.37Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME30_ARATH2.925e-4050.68Probable pectinesterase 30 OS=Arabidopsis thaliana... [more]
PME35_ARATH4.989e-4058.39Probable pectinesterase/pectinesterase inhibitor 3... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05K11_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05K11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834511 ID=CF834511; Name=CF834511; organism=Citrus sinensis; type=EST; length=533bp
GCCAGAAAGCCCCTTTTAAAGCAATCCAACATGGTCACAGCCCAAGGACG
GACCGACCCAAATCAAAACACAGGGACTTCGATCCAAAAATGTGAAGTCA
TAGCAAGCTCAGATCTGGAGCCCGTAAAGGGCTCGATCCGTTCGTACTTG
GGCCGGCCTTGGAAAGAATACTCGAGAACAGTTGTAATGCAGTCACACAT
CGGGGATCATATCGATCCAGCTGGATGGTCAGAATGGAGTGGAGATTTTG
CACTGAAGACACTGTATTATGGGGAGTATCTGAATAGAGGGCCAGGTGCT
GGGACTAGCAAAAGAGTGAAATGGCCTGGCTATCACGTTATTACAGACCC
AGAAGAAGCAAAAAAATTTACAGTAGCTGAGCTTATCGGAGGAGGGTCGT
GGTTGAAATCAACTGGAGTTGCTTATACTGAGGGGCTGTGATGTCAGCTC
AGCATATATCTTTTAAGCTTGTATTTGCCACTGCTTTCTATCAGTTGAAT
AATGAATGAATCCGAGTAACGTGCTGTACTAGT
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