CF834511

Overview
NameCF834511
Unique NameCF834511
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length533
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834511 vs. ExPASy Swiss-Prot
Match: PME39_ARATH (Probable pectinesterase/pectinesterase inhibitor 39 OS=Arabidopsis thaliana GN=PME39 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 4.224e-39
Identity = 76/145 (52.41%), Postives = 98/145 (67.59%), Query Frame = 1
Query:    1 ARKPLLKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEG 435
            ARKP        TAQ R   +Q TG SI  C ++A+ DL PVK + ++YLGRPW++YSRTV+++S I D I PAGW E   DFAL+TLYYGEY+N GPGA  +KRV WPG+  I +  EA +FTV   I G +WL STG+ ++ G
Sbjct:  387 ARKPNPGHKIAFTAQSRNQSDQPTGISILNCRILAAPDLIPVKENFKAYLGRPWRKYSRTVIIKSFIDDLIHPAGWLEGKKDFALETLYYGEYMNEGPGANMAKRVTWPGFRRIENQTEATQFTVGPFIDGSTWLNSTGIPFSLG 531          
BLAST of CF834511 vs. ExPASy Swiss-Prot
Match: PME25_ARATH (Probable pectinesterase/pectinesterase inhibitor 25 OS=Arabidopsis thaliana GN=PME25 PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.229e-38
Identity = 76/146 (52.05%), Postives = 96/146 (65.75%), Query Frame = 1
Query:    1 ARKPLLKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 438
            ARKP+ KQ N +TA GR DPNQNTG SI  C + A+ DL     S  ++LGRPWK YSRTV MQS+I D + P GW EW+G   L T+YYGEY N GPGA T++RV+W GY+++ +  EA  FTV     G +WL  T + +  GL
Sbjct:  471 ARKPMAKQKNAITAHGRLDPNQNTGISIINCTIKAAPDLAAEPKSAMTFLGRPWKPYSRTVFMQSYISDIVQPVGWLEWNGTIGLDTIYYGEYSNFGPGANTNQRVQWLGYNLL-NLAEAMNFTVYNFTMGDTWLPQTDIPFYGGL 615          
BLAST of CF834511 vs. ExPASy Swiss-Prot
Match: PME40_ARATH (Probable pectinesterase/pectinesterase inhibitor 40 OS=Arabidopsis thaliana GN=PME40 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 1.605e-38
Identity = 72/143 (50.35%), Postives = 98/143 (68.53%), Query Frame = 1
Query:    1 ARKPLLKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYT 429
            AR+P   Q  + TAQGR +  + TG SI    ++A+ DL PV+ + ++YLGRPW+ YSRTV+M+S I D +DPAGW +W  DFAL+TLYYGEY+N GPG+  + RV+WPG+  I   EEA +F+V   I G  WL ST + +T
Sbjct:  373 ARRPNPNQKIIYTAQGRENSREPTGISIISSRILAAPDLIPVQANFKAYLGRPWQLYSRTVIMKSFIDDLVDPAGWLKWKDDFALETLYYGEYMNEGPGSNMTNRVQWPGFKRIETVEEASQFSVGPFIDGNKWLNSTRIPFT 515          
BLAST of CF834511 vs. ExPASy Swiss-Prot
Match: PME59_ARATH (Probable pectinesterase/pectinesterase inhibitor 59 OS=Arabidopsis thaliana GN=PME59 PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 4.670e-38
Identity = 69/147 (46.94%), Postives = 99/147 (67.35%), Query Frame = 1
Query:    4 RKPLLKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEW--SGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 438
            R+PL  Q+N++TAQGR DP QNTG SI    ++ + DL+PV G++++Y+GRPW ++SRTVV+Q+++ + + P GWS W     F L TL+Y EY N GP + T  RV W G+HV+    +A  FTV + I G +WL  TG+ +T GL
Sbjct:  390 RRPLKGQANVITAQGRADPFQNTGISIHNSRILPAPDLKPVVGTVKTYMGRPWMKFSRTVVLQTYLDNVVSPVGWSPWIEGSVFGLDTLFYAEYKNTGPASSTRWRVSWKGFHVLGRASDASAFTVGKFIAGTAWLPRTGIPFTSGL 536          
BLAST of CF834511 vs. ExPASy Swiss-Prot
Match: PME12_ARATH (Probable pectinesterase/pectinesterase inhibitor 12 OS=Arabidopsis thaliana GN=PME12 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 7.966e-38
Identity = 72/146 (49.32%), Postives = 99/146 (67.81%), Query Frame = 1
Query:    1 ARKPLLKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 438
            ++ P+  Q  ++TAQ R   +++TG S+Q C ++AS DL      ++SYLGRPW+E+SRTVVM+S+I + ID +GWS+W+G  AL TLYYGEY N GPG+ T KRV WPG+H++   E+A  FT  E I G  WL ST   Y  G+
Sbjct:  403 SKLPMPGQFTVITAQSRDTQDEDTGISMQNCSILASEDLFNSSNKVKSYLGRPWREFSRTVVMESYIDEFIDGSGWSKWNGGEALDTLYYGEYNNNGPGSETVKRVNWPGFHIM-GYEDAFNFTATEFITGDGWLGSTSFPYDNGI 547          
BLAST of CF834511 vs. ExPASy Swiss-Prot
Match: PME6_ARATH (Probable pectinesterase/pectinesterase inhibitor 6 OS=Arabidopsis thaliana GN=PME6 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 5.163e-37
Identity = 74/146 (50.68%), Postives = 93/146 (63.70%), Query Frame = 1
Query:    1 ARKPLLKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 438
            ARKP+  Q N +TAQ R +P++ TG  IQ   V  +S+         +YLGRPW+ +SRTV M+ ++G  + PAGW  WSG FAL TLYYGEY N G GA  S RVKWPGYHVI    EA+KFTV   + G  W+ +TGV   +GL
Sbjct:  418 ARKPMSGQKNTITAQSRKEPDETTGFVIQSSTVATASE---------TYLGRPWRSHSRTVFMKCNLGALVSPAGWLPWSGSFALSTLYYGEYGNTGAGASVSGRVKWPGYHVIKTVTEAEKFTVENFLDGNYWITATGVPVNDGL 554          
BLAST of CF834511 vs. ExPASy Swiss-Prot
Match: PME58_ARATH (Probable pectinesterase/pectinesterase inhibitor 58 OS=Arabidopsis thaliana GN=PME58 PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 6.743e-37
Identity = 70/141 (49.65%), Postives = 94/141 (66.67%), Query Frame = 1
Query:    4 RKPLLKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAY 426
            RKP+  QS M+TAQGR+D  ++TG  +Q C +       PVK   ++YLGRPWKE+SRT++M + I D IDPAGW  W+GDFAL TLYY EY N GPG+  ++RVKWPG   ++ P++A +FT A  + G  W+    V Y
Sbjct:  427 RKPMKSQSCMITAQGRSDKRESTGLVLQNCHITGEPAYIPVKSINKAYLGRPWKEFSRTIIMGTTIDDVIDPAGWLPWNGDFALNTLYYAEYENNGPGSNQAQRVKWPGIKKLS-PKQALRFTPARFLRGNLWIPPNRVPY 566          
BLAST of CF834511 vs. ExPASy Swiss-Prot
Match: PME28_ARATH (Putative pectinesterase/pectinesterase inhibitor 28 OS=Arabidopsis thaliana GN=PME28 PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.150e-36
Identity = 71/145 (48.97%), Postives = 92/145 (63.45%), Query Frame = 1
Query:    4 RKPLLKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 438
            RKPLL Q+  +TA GR DP ++TG  +Q C ++   D   VK   ++YLGRPWKEYSRT++M + I D + P GW  W G+F L TL+Y E  N GPGA  +KRV WPG   ++D EE  KFT A+ I G +W+   GV Y  GL
Sbjct:  419 RKPLLNQACPITAHGRKDPRESTGFVLQGCTIVGEPDYLAVKEQSKTYLGRPWKEYSRTIIMNTFIPDFVPPEGWQPWLGEFGLNTLFYSEVQNTGPGAAITKRVTWPGIKKLSD-EEILKFTPAQYIQGDAWIPGKGVPYILGL 562          
BLAST of CF834511 vs. ExPASy Swiss-Prot
Match: PME47_ARATH (Probable pectinesterase/pectinesterase inhibitor 47 OS=Arabidopsis thaliana GN=PME47 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 4.371e-36
Identity = 75/146 (51.37%), Postives = 93/146 (63.70%), Query Frame = 1
Query:    1 ARKPLLKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 438
            ARKP+  Q N VTA GRTDPNQ TG SI  C + A+ DL     S  ++LGRPWK YSRTV +QS+I D + P GW EW+G   L T+ YGEY N GPGA TSKRV+W GY ++ +  +A  FTV     G +WL  T + +  GL
Sbjct:  476 ARKPMANQKNAVTAHGRTDPNQKTGISIINCTIGAAPDLAADPKSTMTFLGRPWKPYSRTVYIQSYISDVVQPVGWLEWNGTTGLDTISYGEYDNFGPGADTSKRVQWSGYSLL-NLVQAMNFTVYNFTLGDTWLPQTDIPFYGGL 620          
BLAST of CF834511 vs. ExPASy Swiss-Prot
Match: PME23_ARATH (Probable pectinesterase/pectinesterase inhibitor 23 OS=Arabidopsis thaliana GN=PME23 PE=2 SV=3)

HSP 1 Score: 149.058 bits (375), Expect = 1.272e-35
Identity = 69/142 (48.59%), Postives = 96/142 (67.61%), Query Frame = 1
Query:    4 RKPLLKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYT 429
            RKP   Q+ MVTAQGR++  ++TG  +  C +       P+K   ++YLGRPWKE+SRT++M++ I D IDPAGW  WSGDFALKTLYY E++N GPG+  ++RVKWPG   +T P++A  +T    + G +W+  T V YT
Sbjct:  425 RKPNKGQTCMVTAQGRSNVRESTGLVLHGCHITGDPAYIPMKSVNKAYLGRPWKEFSRTIIMKTTIDDVIDPAGWLPWSGDFALKTLYYAEHMNTGPGSNQAQRVKWPGIKKLT-PQDALLYTGDRFLRGDTWIPQTQVPYT 565          
The following BLAST results are available for this feature:
BLAST of CF834511 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
PME39_ARATH4.224e-3952.41Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME25_ARATH1.229e-3852.05Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME40_ARATH1.605e-3850.35Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME59_ARATH4.670e-3846.94Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME12_ARATH7.966e-3849.32Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME6_ARATH5.163e-3750.68Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME58_ARATH6.743e-3749.65Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME28_ARATH1.150e-3648.97Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME47_ARATH4.371e-3651.37Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME23_ARATH1.272e-3548.59Probable pectinesterase/pectinesterase inhibitor 2... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05K11_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05K11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834511 ID=CF834511; Name=CF834511; organism=Citrus sinensis; type=EST; length=533bp
GCCAGAAAGCCCCTTTTAAAGCAATCCAACATGGTCACAGCCCAAGGACG
GACCGACCCAAATCAAAACACAGGGACTTCGATCCAAAAATGTGAAGTCA
TAGCAAGCTCAGATCTGGAGCCCGTAAAGGGCTCGATCCGTTCGTACTTG
GGCCGGCCTTGGAAAGAATACTCGAGAACAGTTGTAATGCAGTCACACAT
CGGGGATCATATCGATCCAGCTGGATGGTCAGAATGGAGTGGAGATTTTG
CACTGAAGACACTGTATTATGGGGAGTATCTGAATAGAGGGCCAGGTGCT
GGGACTAGCAAAAGAGTGAAATGGCCTGGCTATCACGTTATTACAGACCC
AGAAGAAGCAAAAAAATTTACAGTAGCTGAGCTTATCGGAGGAGGGTCGT
GGTTGAAATCAACTGGAGTTGCTTATACTGAGGGGCTGTGATGTCAGCTC
AGCATATATCTTTTAAGCTTGTATTTGCCACTGCTTTCTATCAGTTGAAT
AATGAATGAATCCGAGTAACGTGCTGTACTAGT
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