CF834511

Overview
NameCF834511
Unique NameCF834511
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length533
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834511 vs. ExPASy Swiss-Prot
Match: PME24_ARATH (Putative pectinesterase/pectinesterase inhibitor 24 OS=Arabidopsis thaliana GN=PME24 PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 3.700e-35
Identity = 71/145 (48.97%), Postives = 91/145 (62.76%), Query Frame = 1
Query:    4 RKPLLKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 438
            R+P+  Q N +TAQGRTDPN NTG SI +C +    DL  V     ++LGRPWK +S TV+M S++   ID  GW  W+GD A  T++YGEY N GPGA T  RVKW G   ++  +EA +FTV   I GG WL +T V +  GL
Sbjct:  422 RRPMKGQQNTITAQGRTDPNMNTGISIHRCNISPLGDLTDVM----TFLGRPWKNFSTTVIMDSYLHGFIDRKGWLPWTGDSAPDTIFYGEYKNTGPGASTKNRVKWKGLRFLS-TKEANRFTVKPFIDGGRWLPATKVPFRSGL 561          
BLAST of CF834511 vs. ExPASy Swiss-Prot
Match: PME60_ARATH (Probable pectinesterase/pectinesterase inhibitor 60 OS=Arabidopsis thaliana GN=PME60 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 8.243e-35
Identity = 67/147 (45.58%), Postives = 97/147 (65.99%), Query Frame = 1
Query:    4 RKPLLKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWS--GDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 438
            R PL  Q+N++TAQGRTD  QNTG SI    +I + DL+PV  S+++Y+GRPW  YSRTVV++++I   + P GWS W+    + L TL+Y EY N GP + T  RV+W G+HV++   +A  F+V + I G +WL  +G+ +T  L
Sbjct:  394 RLPLKGQANVITAQGRTDLFQNTGISIHNSIIIPAPDLKPVVRSVKTYMGRPWMMYSRTVVLKTYIDSVVSPVGWSPWTKGSTYGLDTLFYAEYKNIGPASSTRWRVRWKGFHVLSKASDASAFSVGKFIAGTAWLPGSGIPFTSEL 540          
BLAST of CF834511 vs. ExPASy Swiss-Prot
Match: PME21_ARATH (Probable pectinesterase/pectinesterase inhibitor 21 OS=Arabidopsis thaliana GN=PME21 PE=2 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 8.243e-35
Identity = 68/145 (46.90%), Postives = 89/145 (61.38%), Query Frame = 1
Query:    4 RKPLLKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 438
            RKPL  Q+  +TA GR DP ++TG   Q C +    D   VK + ++YLGRPWKEYSRT++M + I D + P GW  W GDF LKTL+Y E  N GPG+  + RV W G   +++ E+  KFT A+ I G  W+   GV YT GL
Sbjct:  422 RKPLPNQACPITAHGRKDPRESTGFVFQGCTIAGEPDYLAVKETSKAYLGRPWKEYSRTIIMNTFIPDFVQPQGWQPWLGDFGLKTLFYSEVQNTGPGSALANRVTWAGIKTLSE-EDILKFTPAQYIQGDDWIPGKGVPYTTGL 565          
BLAST of CF834511 vs. ExPASy Swiss-Prot
Match: PME22_ARATH (Putative pectinesterase/pectinesterase inhibitor 22 OS=Arabidopsis thaliana GN=PME22 PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.077e-34
Identity = 75/145 (51.72%), Postives = 90/145 (62.07%), Query Frame = 1
Query:    4 RKPLLKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 438
            R PL  Q   +TAQGR  PNQNTG  IQ   V+A+           +YLGRPWK YSRTV M +++   + P GW EW G+FAL TL+YGEY N GPG  +S RVKWPGYH++ D   A  FTV   I G  WL +TGV +T GL
Sbjct:  407 RVPLPLQKVTITAQGRKSPNQNTGFVIQNSYVLATQP---------TYLGRPWKLYSRTVYMNTYMSQLVQPRGWLEWFGNFALDTLWYGEYNNIGPGWRSSGRVKWPGYHIM-DKRTALSFTVGSFIDGRRWLPATGVTFTAGL 541          
BLAST of CF834511 vs. ExPASy Swiss-Prot
Match: PME45_ARATH (Putative pectinesterase/pectinesterase inhibitor 45 OS=Arabidopsis thaliana GN=PME45 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 1.836e-34
Identity = 77/146 (52.74%), Postives = 91/146 (62.33%), Query Frame = 1
Query:    4 RKPLLKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEW-SGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 438
            RK L  Q N VTAQGR D  Q TG  I  C V  + DL+PVK   +SYLGRPWK +SRTVVM+S I D IDP GW  W   DFA+ TL Y EY N GP   T+ RVKWPG+ V+ + EEA KFTV   +  G W+++ G     GL
Sbjct:  463 RKGLPGQKNTVTAQGRVDKFQTTGFVIHNCTVAPNEDLKPVKAQFKSYLGRPWKPHSRTVVMESTIEDVIDPVGWLRWQETDFAIDTLSYAEYKNDGPSGATAARVKWPGFRVL-NKEEAMKFTVGPFL-QGEWIQAIGSPVKLGL 606          
BLAST of CF834511 vs. ExPASy Swiss-Prot
Match: PME13_ARATH (Probable pectinesterase/pectinesterase inhibitor 13 OS=Arabidopsis thaliana GN=PME13 PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 2.398e-34
Identity = 73/146 (50.00%), Postives = 93/146 (63.70%), Query Frame = 1
Query:    4 RKPLLKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEW-SGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 438
            RK L  Q N VTAQGR D  Q TG  +  C++ A+ DL+PVK   +SYLGRPWK YSRT++M+S I + IDP GW  W   DFA+ TLYY EY N+G    T+ RVKWPG+ VI + EEA  +TV   +  G W+ ++G     GL
Sbjct:  468 RKGLPGQKNTVTAQGRVDKFQTTGFVVHNCKIAANEDLKPVKEEYKSYLGRPWKNYSRTIIMESKIENVIDPVGWLRWQETDFAIDTLYYAEYNNKGSSGDTTSRVKWPGFKVI-NKEEALNYTVGPFL-QGDWISASGSPVKLGL 611          
BLAST of CF834511 vs. ExPASy Swiss-Prot
Match: PME46_ARATH (Probable pectinesterase/pectinesterase inhibitor 46 OS=Arabidopsis thaliana GN=PME46 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 3.132e-34
Identity = 68/141 (48.23%), Postives = 89/141 (63.12%), Query Frame = 1
Query:    4 RKPLLKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAY 426
            R+P+  Q N +TAQGR DPNQNTG SI  C +    +L      I+++LGRPWK++S TV+M+S +   I+P GW  W+GD A  T++Y EYLN GPGA T  RVKW G       +EA KFTV   I G +WL +T V +
Sbjct:  424 RRPMKGQQNTITAQGRKDPNQNTGISIHNCTIKPLDNLT----DIQTFLGRPWKDFSTTVIMKSFMDKFINPKGWLPWTGDTAPDTIFYAEYLNSGPGASTKNRVKWQGLKTSLTKKEANKFTVKPFIDGNNWLPATKVPF 560          
BLAST of CF834511 vs. ExPASy Swiss-Prot
Match: PME38_ARATH (Putative pectinesterase/pectinesterase inhibitor 38 OS=Arabidopsis thaliana GN=PME38 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 3.829e-32
Identity = 64/137 (46.72%), Postives = 89/137 (64.96%), Query Frame = 1
Query:   28 NMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 438
            N +TAQ R +PNQ TG  I    V  +  ++   G +++YLGRPW+ Y+RTVV+ +++   I+P GW +W    AL TLYYGEY N GPG+GT  RV W G+HVI+D +EA++FT+ + I   SWL  T V +T  L
Sbjct:  340 NTITAQSRFNPNQTTGIVIHNSVVKGAPGVQ--LGGVKTYLGRPWRSYARTVVIGTYLDTLIEPNGWIDWDNVTALSTLYYGEYQNSGPGSGTENRVDWAGFHVISDIQEAREFTLPKFIDSASWLPPTKVPFTINL 474          
BLAST of CF834511 vs. ExPASy Swiss-Prot
Match: PME1_ARATH (Pectinesterase 1 OS=Arabidopsis thaliana GN=PME1 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 5.001e-32
Identity = 66/140 (47.14%), Postives = 92/140 (65.71%), Query Frame = 1
Query:    4 RKPLLKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEW-SGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGV 420
            R+PL  Q N +TAQG+ DPNQ++G SIQ+C + A+ ++        +YLGRPWKE+S TV+M++ IG  + P+GW  W SG     ++ YGEY N GPG+  ++RVKW GY  +    EA KFTVA L+ G  W+ +TGV
Sbjct:  447 RQPLSNQFNTITAQGKKDPNQSSGMSIQRCTISANGNV-----IAPTYLGRPWKEFSTTVIMETVIGAVVRPSGWMSWVSGVDPPASIVYGEYKNTGPGSDVTQRVKWAGYKPVMSDAEAAKFTVATLLHGADWIPATGV 581          
BLAST of CF834511 vs. ExPASy Swiss-Prot
Match: PME_PETIN (Pectinesterase OS=Petunia integrifolia GN=PPE1 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 3.242e-31
Identity = 67/147 (45.58%), Postives = 87/147 (59.18%), Query Frame = 1
Query:    4 RKPLLKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWS-GDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGG-SWLKSTGVAYTEGL 438
            RKP   QS MVTAQGRT+P Q     +Q CE+   +D   +    ++YLGRPWKEYSRT++MQS+I   I+P GW+ W+  +F   T YY EY NRGPGA   KR+ W G+      E A+KFT    I    +WL+   V Y  G+
Sbjct:  225 RKPAQNQSCMVTAQGRTEPIQKGAIVLQNCEIKPDTDYFSLSPPSKTYLGRPWKEYSRTIIMQSYIDKFIEPEGWAPWNITNFGRDTSYYAEYQNRGPGAALDKRITWKGFQKGFTGEAAQKFTAGVYINNDENWLQKANVPYEAGM 371          
The following BLAST results are available for this feature:
BLAST of CF834511 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
PME24_ARATH3.700e-3548.97Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME60_ARATH8.243e-3545.58Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME21_ARATH8.243e-3546.90Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME22_ARATH1.077e-3451.72Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME45_ARATH1.836e-3452.74Putative pectinesterase/pectinesterase inhibitor 4... [more]
PME13_ARATH2.398e-3450.00Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME46_ARATH3.132e-3448.23Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME38_ARATH3.829e-3246.72Putative pectinesterase/pectinesterase inhibitor 3... [more]
PME1_ARATH5.001e-3247.14Pectinesterase 1 OS=Arabidopsis thaliana GN=PME1 P... [more]
PME_PETIN3.242e-3145.58Pectinesterase OS=Petunia integrifolia GN=PPE1 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05K11_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05K11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834511 ID=CF834511; Name=CF834511; organism=Citrus sinensis; type=EST; length=533bp
GCCAGAAAGCCCCTTTTAAAGCAATCCAACATGGTCACAGCCCAAGGACG
GACCGACCCAAATCAAAACACAGGGACTTCGATCCAAAAATGTGAAGTCA
TAGCAAGCTCAGATCTGGAGCCCGTAAAGGGCTCGATCCGTTCGTACTTG
GGCCGGCCTTGGAAAGAATACTCGAGAACAGTTGTAATGCAGTCACACAT
CGGGGATCATATCGATCCAGCTGGATGGTCAGAATGGAGTGGAGATTTTG
CACTGAAGACACTGTATTATGGGGAGTATCTGAATAGAGGGCCAGGTGCT
GGGACTAGCAAAAGAGTGAAATGGCCTGGCTATCACGTTATTACAGACCC
AGAAGAAGCAAAAAAATTTACAGTAGCTGAGCTTATCGGAGGAGGGTCGT
GGTTGAAATCAACTGGAGTTGCTTATACTGAGGGGCTGTGATGTCAGCTC
AGCATATATCTTTTAAGCTTGTATTTGCCACTGCTTTCTATCAGTTGAAT
AATGAATGAATCCGAGTAACGTGCTGTACTAGT
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