CF834511

Overview
NameCF834511
Unique NameCF834511
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length533
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834511 vs. ExPASy Swiss-Prot
Match: PME43_ARATH (Putative pectinesterase/pectinesterase inhibitor 43 OS=Arabidopsis thaliana GN=PME43 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 1.609e-30
Identity = 61/141 (43.26%), Postives = 86/141 (60.99%), Query Frame = 1
Query:    4 RKPLLKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAY 426
            R+P+  Q  +VTAQGR D  + TG  I    +   +   PVK   R++LGRPWKE+SRT++M + I D IDP GW +W+  FAL TL+Y EY NRG G+G  +RV+W G   I+D   A++F     + G +W+  T + Y
Sbjct:  559 RRPMEHQQCIVTAQGRKDRRETTGIVIHNSRITGDASYLPVKAKNRAFLGRPWKEFSRTIIMNTEIDDVIDPEGWLKWNETFALNTLFYTEYRNRGRGSGQGRRVRWRGIKRISD-RAAREFAPGNFLRGNTWIPQTRIPY 698          
BLAST of CF834511 vs. ExPASy Swiss-Prot
Match: PME54_ARATH (Probable pectinesterase/pectinesterase inhibitor 54 OS=Arabidopsis thaliana GN=PME54 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.362e-29
Identity = 65/128 (50.78%), Postives = 82/128 (64.06%), Query Frame = 1
Query:   16 LKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEW--SGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGG 393
            +K  N++ A GRTD  QNTG ++  C +   SDL PVK    SYLGRPW++YSR +VM+S+I D I   GW+ W  SGD  LKTLY+GE+ N GP A  SKRV W G+H I   EEA  F+V +   G
Sbjct:  369 VKAYNVILANGRTDQRQNTGFALHSCRIRTDSDLSPVKHKYSSYLGRPWRKYSRAIVMESYIDDAIAEGGWAGWLDSGDEVLKTLYFGEFKNYGPKARISKRVTWEGFHSI-GFEEANYFSVVKRRNG 495          
BLAST of CF834511 vs. ExPASy Swiss-Prot
Match: PME3_PHAVU (Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.153e-28
Identity = 66/148 (44.59%), Postives = 86/148 (58.11%), Query Frame = 1
Query:    4 RKPLLKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRS--YLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKT-LYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 438
            R+PL  Q N +TAQG+ DPNQNTG  IQK      S + P   ++ +  YLGRPWK++S TV+MQS IG  ++P GW  W  +    T ++Y EY N GPGA  S+RVKW GY        A++FTV   I G  WL +  V +   L
Sbjct:  440 RQPLPNQFNTITAQGKKDPNQNTGIIIQK------STITPFGNNLTAPTYLGRPWKDFSTTVIMQSDIGALLNPVGWMSWVPNVEPPTTIFYAEYQNSGPGADVSQRVKWAGYKPTITDRNAEEFTVQSFIQGPEWLPNAAVQFDSTL 581          
BLAST of CF834511 vs. ExPASy Swiss-Prot
Match: PME26_ARATH (Putative pectinesterase/pectinesterase inhibitor 26 OS=Arabidopsis thaliana GN=PME26 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 4.381e-28
Identity = 61/137 (44.53%), Postives = 88/137 (64.23%), Query Frame = 1
Query:    4 RKPLLKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSG--DFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELI-GGGSWL 405
            R+PL  Q N +TA+G  + NQNTG SI +C +  + ++     +  +YLGRPWK +S+TV+MQS IG  ++PAGW  W+   D   +T++Y EY N GPG+  SKRVKW GY  I+  +EA +FTV   + G  +W+
Sbjct:  827 RQPLPNQFNTITAEGTQEANQNTGISIHQCTISPNGNV-----TATTYLGRPWKLFSKTVIMQSVIGSFVNPAGWIAWNSTYDPPPRTIFYREYKNSGPGSDLSKRVKWAGYKPISSDDEAARFTVKYFLRGDDNWI 958          
BLAST of CF834511 vs. ExPASy Swiss-Prot
Match: PME37_ARATH (Probable pectinesterase/pectinesterase inhibitor VGDH2 OS=Arabidopsis thaliana GN=VGDH2 PE=2 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 5.013e-24
Identity = 59/146 (40.41%), Postives = 81/146 (55.48%), Query Frame = 1
Query:    4 RKPLLKQSNMVTAQGRTD-PNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 438
            RK    QSN VTA G         G  +  C +I   +LE  K +I+SYLGRPWK+++ TV++ + IGD I P GW+EW G+   KT  Y E+ NRGPGA T++R  W    V     E + +TVA  +G  +W++   V    GL
Sbjct:  445 RKGSPGQSNYVTADGNEKGAAMKIGIVLHNCRIIPDKELEADKLTIKSYLGRPWKKFATTVIIGTEIGDLIKPEGWTEWQGEQNHKTAKYIEFNNRGPGAATTQRPPW--VKVAKSAAEVETYTVANWVGPANWIQEANVPVQLGL 588          
BLAST of CF834511 vs. ExPASy Swiss-Prot
Match: PME51_ARATH (Probable pectinesterase/pectinesterase inhibitor 51 OS=Arabidopsis thaliana GN=PME51 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.235e-22
Identity = 58/131 (44.27%), Postives = 78/131 (59.54%), Query Frame = 1
Query:   22 QSNMVTAQGRTDPNQNTGTSIQKCEVIASSD-LEPVKGSIR---SYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSW 402
            + N VTAQGR DP+Q+TG     C +  + + ++  K + +   ++LGRPWK+YSRTV +  ++   I P GW  WSGDFALKTLYYGE  N GPG+  S+RV W     I D E    ++VA  I    W
Sbjct:  419 EKNAVTAQGRIDPSQSTGFVFLNCLINGTEEYMKLFKANPKVHKNFLGRPWKDYSRTVFIGCNLEALITPDGWLPWSGDFALKTLYYGESKNTGPGSDRSQRVSWSSQ--IPD-EHVHVYSVANFIQADEW 546          
BLAST of CF834511 vs. ExPASy Swiss-Prot
Match: PME5_ARATH (Pectinesterase 5 OS=Arabidopsis thaliana GN=PME5 PE=2 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 2.106e-22
Identity = 58/146 (39.73%), Postives = 76/146 (52.05%), Query Frame = 1
Query:    4 RKPLLKQSNMVTAQGRTDP-NQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 438
            RK    Q N VTA G         G  +Q C ++    L   +  + SYLGRPWK++S TV++ S IGD I P GW  W G+   K+  Y EY NRGPGA T++RV W    +     E   FTVA  +G  +W++   V  T GL
Sbjct:  452 RKGNKGQFNTVTADGNEKGLAMKIGIVLQNCRIVPDKKLAAERLIVESYLGRPWKKFSTTVIINSEIGDVIRPEGWKIWDGESFHKSCRYVEYNNRGPGAITNRRVNW--VKIARSAAEVNDFTVANWLGPINWIQEANVPVTLGL 595          
BLAST of CF834511 vs. ExPASy Swiss-Prot
Match: PME64_ARATH (Probable pectinesterase/pectinesterase inhibitor 64 OS=Arabidopsis thaliana GN=PME64 PE=2 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 3.592e-22
Identity = 55/138 (39.86%), Postives = 75/138 (54.35%), Query Frame = 1
Query:   25 SNMVTAQGRTDPNQNTGTSIQKCEVIASSD----LEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKW----PGYHVITDPEEAKKFTVAELIGGGSWLKST 414
            +N +TA GR D +Q+TG     C +  + +     +      +++LGRPWKE+SRTV +  ++   I P GW  W+GDFALKTLYYGEY N GPG+  S RV W    P  HV         ++VA  I    W  +T
Sbjct:  471 NNAITAHGRIDASQSTGFVFLNCSINGTEEYMKEFQANPEGHKNFLGRPWKEFSRTVFVNCNLESLISPDGWMPWNGDFALKTLYYGEYKNTGPGSVRSSRVPWSSEIPEKHV-------DVYSVANFIQADEWASTT 601          
BLAST of CF834511 vs. ExPASy Swiss-Prot
Match: PME4_ARATH (Pectinesterase 4 OS=Arabidopsis thaliana GN=PME4 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 3.592e-22
Identity = 56/146 (38.36%), Postives = 76/146 (52.05%), Query Frame = 1
Query:    4 RKPLLKQSNMVTAQGRT-DPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 438
            RK    Q N VTA G         G  +Q C ++    L P + ++ +YLGRPWK++S TV+M + +GD I P GW  W G+   K+  Y EY NRGPGA  ++RV W    V     E   FT A  +G  +W++   V  T GL
Sbjct:  445 RKGSKGQYNTVTADGNELGLGMKIGIVLQNCRIVPDRKLTPERLTVATYLGRPWKKFSTTVIMSTEMGDLIRPEGWKIWDGESFHKSCRYVEYNNRGPGAFANRRVNWA--KVARSAAEVNGFTAANWLGPINWIQEANVPVTIGL 588          
BLAST of CF834511 vs. ExPASy Swiss-Prot
Match: PME_BRANA (Probable pectinesterase/pectinesterase inhibitor OS=Brassica napus GN=BP19 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 4.692e-22
Identity = 55/146 (37.67%), Postives = 79/146 (54.11%), Query Frame = 1
Query:    4 RKPLLKQSNMVTAQGRTDPNQ-NTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 438
            RK    Q+N VTA G         G  +  C ++A  +LE  + +++SYLGRPWK ++ T V+ + IGD I P GW+EW G+    T  Y E+ NRGPGA T+ RV W    +     E ++FTVA  +   +W++   V    GL
Sbjct:  441 RKGSPGQTNHVTADGNEKGKAVKIGIVLHNCRIMADKELEADRLTVKSYLGRPWKPFATTAVIGTEIGDLIQPTGWNEWQGEKFHLTATYVEFNNRGPGANTAARVPWA--KMAKSAAEVERFTVANWLTPANWIQEANVPVQLGL 584          
The following BLAST results are available for this feature:
BLAST of CF834511 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
PME43_ARATH1.609e-3043.26Putative pectinesterase/pectinesterase inhibitor 4... [more]
PME54_ARATH1.362e-2950.78Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME3_PHAVU1.153e-2844.59Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=... [more]
PME26_ARATH4.381e-2844.53Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME37_ARATH5.013e-2440.41Probable pectinesterase/pectinesterase inhibitor V... [more]
PME51_ARATH1.235e-2244.27Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME5_ARATH2.106e-2239.73Pectinesterase 5 OS=Arabidopsis thaliana GN=PME5 P... [more]
PME64_ARATH3.592e-2239.86Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME4_ARATH3.592e-2238.36Pectinesterase 4 OS=Arabidopsis thaliana GN=PME4 P... [more]
PME_BRANA4.692e-2237.67Probable pectinesterase/pectinesterase inhibitor O... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05K11_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05K11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834511 ID=CF834511; Name=CF834511; organism=Citrus sinensis; type=EST; length=533bp
GCCAGAAAGCCCCTTTTAAAGCAATCCAACATGGTCACAGCCCAAGGACG
GACCGACCCAAATCAAAACACAGGGACTTCGATCCAAAAATGTGAAGTCA
TAGCAAGCTCAGATCTGGAGCCCGTAAAGGGCTCGATCCGTTCGTACTTG
GGCCGGCCTTGGAAAGAATACTCGAGAACAGTTGTAATGCAGTCACACAT
CGGGGATCATATCGATCCAGCTGGATGGTCAGAATGGAGTGGAGATTTTG
CACTGAAGACACTGTATTATGGGGAGTATCTGAATAGAGGGCCAGGTGCT
GGGACTAGCAAAAGAGTGAAATGGCCTGGCTATCACGTTATTACAGACCC
AGAAGAAGCAAAAAAATTTACAGTAGCTGAGCTTATCGGAGGAGGGTCGT
GGTTGAAATCAACTGGAGTTGCTTATACTGAGGGGCTGTGATGTCAGCTC
AGCATATATCTTTTAAGCTTGTATTTGCCACTGCTTTCTATCAGTTGAAT
AATGAATGAATCCGAGTAACGTGCTGTACTAGT
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