CF834511
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834511 vs. ExPASy Swiss-Prot
Match: PME_BRACM (Pectinesterase/pectinesterase inhibitor (Fragment) OS=Brassica campestris PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.045e-21 Identity = 54/146 (36.99%), Postives = 79/146 (54.11%), Query Frame = 1 Query: 4 RKPLLKQSNMVTAQGRTDPNQ-NTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 438 RK Q+N VTA G+ G + C ++A +LE + +++SYLGRPWK ++ T V+ + IGD I P GW+EW G+ T Y E+ NRGPGA + RV W + E ++FTVA + +W++ V GL Sbjct: 428 RKGSPGQTNHVTADGKQKGKAVKIGIVLHNCRIMADKELEADRLTVKSYLGRPWKPFATTAVIGTEIGDLIQPTGWNEWQGEKFHLTATYVEFNNRGPGANPAARVPWA--KMAKSAAEVERFTVANWLTPANWIQEANVTVQLGL 571
BLAST of CF834511 vs. ExPASy Swiss-Prot
Match: PME_MEDSA (Pectinesterase/pectinesterase inhibitor OS=Medicago sativa PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.845e-18 Identity = 55/149 (36.91%), Postives = 71/149 (47.65%), Query Frame = 1 Query: 4 RKPLLKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEA-----KKFTVAELIGGGSWLKSTGVAYTEG 435 R P Q +VTA GR N + Q L V + SYLGRPWK+YS+ V+M S I P G+ W G +T Y EY N+GPGA T+ RVKW G V+T A K F + +W+ +GV Y+ G Sbjct: 298 RLPAKGQQCLVTAGGREKQNSASALVFQSSHFTGEPALTSVTPKV-SYLGRPWKQYSKVVIMDSTIDAIFVPEGYMPWMGSAFKETCTYYEYNNKGPGADTNLRVKWHGVKVLTSNVAAEYYPGKFFEIVNATARDTWIVKSGVPYSLG 445
BLAST of CF834511 vs. ExPASy Swiss-Prot
Match: PME56_ARATH (Probable pectinesterase 56 OS=Arabidopsis thaliana GN=PME56 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 3.147e-18 Identity = 40/77 (51.95%), Postives = 57/77 (74.03%), Query Frame = 1 Query: 1 ARKPLLKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWS 231 ARKP + Q+N++TAQ R + +G S QKC + ASSDL P+KG+++++LGRPW+ +SR V M+S I D ID AGW+ Sbjct: 211 ARKPGIGQTNILTAQSREEDTATSGFSFQKCNISASSDLTPIKGTVKTFLGRPWRAFSRVVFMESFIDDVIDRAGWT 287
BLAST of CF834511 vs. ExPASy Swiss-Prot
Match: PME11_ARATH (Putative pectinesterase 11 OS=Arabidopsis thaliana GN=PME11 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 5.024e-16 Identity = 46/132 (34.85%), Postives = 64/132 (48.48%), Query Frame = 1 Query: 13 LLKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLK 408 L + +TAQ RT + +G + C++ GS ++LGRPW YSR V S + + P GW++W T+YYGEY GPGA +RV+W EEA F + IGG WL+ Sbjct: 214 LSPNNGSITAQMRTSATEKSGFTFLGCKLT---------GSGSTFLGRPWGAYSRVVFAYSFFSNVVAPQGWNQWGDSTKENTVYYGEYKCYGPGADREQRVEWSKQ---LSDEEATVFLSKDFIGGKDWLR 333
BLAST of CF834511 vs. ExPASy Swiss-Prot
Match: PME53_ARATH (Probable pectinesterase 53 OS=Arabidopsis thaliana GN=PME53 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 2.757e-14 Identity = 47/125 (37.60%), Postives = 62/125 (49.60%), Query Frame = 1 Query: 34 VTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLK 408 VTAQGR+ ++TG S KC+V + L YLGR W +SR V +++ + I P GW W T++YG+Y G GA RV W +TD EEAK F I G W+K Sbjct: 270 VTAQGRSSVLEDTGFSFVKCKVTGTGVL---------YLGRAWGPFSRVVFAYTYMDNIILPRGWYNWGDPSREMTVFYGQYKCTGAGANYGGRVAWA--RELTD-EEAKPFLSLTFIDGSEWIK 382
BLAST of CF834511 vs. ExPASy Swiss-Prot
Match: PME62_ARATH (Pectinesterase QRT1 OS=Arabidopsis thaliana GN=QRT1 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 3.981e-13 Identity = 44/130 (33.85%), Postives = 58/130 (44.62%), Query Frame = 1 Query: 19 KQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLK 408 K+ + A R ++TG S C++ G+ + YLGR W YSRTV I D I P GWS+W + + +GEY RG GA RV W +E K F E I G WL+ Sbjct: 262 KRYGAIAAHHRDSETEDTGFSFVNCDI---------SGTGQIYLGRAWGNYSRTVYSNCFIADIITPVGWSDWKHPERQRKVMFGEYNCRGRGAERGGRVPW---SKTLTRDEVKPFLGREFIYGDQWLR 379
BLAST of CF834511 vs. ExPASy Swiss-Prot
Match: PME55_ARATH (Probable pectinesterase 55 OS=Arabidopsis thaliana GN=PME55 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.976e-12 Identity = 38/97 (39.18%), Postives = 51/97 (52.58%), Query Frame = 1 Query: 34 VTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKW 324 +TAQGRT+ N G C V G ++YLGR W+ YSR + S++ D +DP GW EW+ K L Y E+ G G+ TS+R KW Sbjct: 212 ITAQGRTNANDANGFVFINCLV---------HGFGKAYLGRAWRPYSRVIFYNSNLTDVVDPLGWWEWNYQGYEKQLTYAEHGCFGSGSNTSRRAKW 299
BLAST of CF834511 vs. ExPASy Swiss-Prot
Match: PME15_ARATH (Probable pectinesterase 15 OS=Arabidopsis thaliana GN=PME15 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.281e-11 Identity = 40/129 (31.01%), Postives = 61/129 (47.29%), Query Frame = 1 Query: 34 VTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGV 420 +TAQGR ++ +G S C++ S ++ LGR W Y+ V +++ I P GW+ W KT+ +GE+ GPGA +RV + +TD EA F I G WL+ T + Sbjct: 274 ITAQGRQSEDEQSGFSFVNCKIDGSGEI---------LLGRAWGAYATVVFSNTYMSGIITPEGWNNWGDSTKEKTVTFGEHKCYGPGADYKERVLFG--KQLTD-SEASSFIDVSFIDGDEWLRHTNI 390
BLAST of CF834511 vs. ExPASy Swiss-Prot
Match: PME14_ARATH (Putative pectinesterase 14 OS=Arabidopsis thaliana GN=PME14 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.853e-11 Identity = 39/124 (31.45%), Postives = 58/124 (46.77%), Query Frame = 1 Query: 34 VTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWL 405 +TA G+ TG C++ GS R +LGR W+ Y+R + ++++ + GW++ +T+YYGE+ GPGA SKRV Y + EA FT I G WL Sbjct: 222 ITANGKDTLKDRTGFVFVNCKIT---------GSARVWLGRAWRPYARVIFSKTYMSRVVSLDGWNDMGDPKTQRTVYYGEHRCYGPGANHSKRVT---YAKLLSDVEAAPFTNISFIDGEEWL 333
BLAST of CF834511 vs. ExPASy Swiss-Prot
Match: PME8_ARATH (Probable pectinesterase 8 OS=Arabidopsis thaliana GN=PME8 PE=2 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 3.726e-11 Identity = 41/125 (32.80%), Postives = 62/125 (49.60%), Query Frame = 1 Query: 34 VTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLK 408 VTA GR+ ++N+G S C + G+ +LGR W+ YSR V + + + D I P GW+ ++ T++YGEY GPGA SKR P + + + A + I G WL+ Sbjct: 277 VTANGRSSKDENSGFSFVNCTI---------GGTGHVWLGRAWRPYSRVVFVSTTMTDVIAPEGWNNFNDPSRDATIFYGEYNCSGPGADMSKRA--PYVQKLNETQVALLINTS-FIDGDQWLQ 389 The following BLAST results are available for this feature:
BLAST of CF834511 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834511 ID=CF834511; Name=CF834511; organism=Citrus sinensis; type=EST; length=533bpback to top |