CF834512

Overview
NameCF834512
Unique NameCF834512
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length471
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834512 vs. ExPASy Swiss-Prot
Match: PME41_ARATH (Probable pectinesterase/pectinesterase inhibitor 41 OS=Arabidopsis thaliana GN=PME41 PE=2 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 1.927e-33
Identity = 67/132 (50.76%), Postives = 85/132 (64.39%), Query Frame = 3
Query:    3 QGRTDPNQNTGTSIQKCEVIASSYLEPVKDSIRSYLGRPWKEYSTTVVMQSHIGDHIDPPGWSQWSGDFALKTLYYGEYLNRGPCAGTTKRMKWAGYHVITDPEQAKKFTVTELIGGGSGLKSTGVAYTEGL 398
            QGRTDPNQNTG SI  C +  +  L     ++++YLGRPWKEYS TV MQS+I + ++P GW +W+GDFAL TLYY EY N G  + TT R+ W GYHVI   + A  FTV   + G   +  +GV Y  GL
Sbjct:  441 QGRTDPNQNTGISIHNCTIKPADDLVSSNYTVKTYLGRPWKEYSRTVFMQSYIDEVVEPVGWREWNGDFALSTLYYAEYNNTGSGSSTTDRVVWPGYHVINSTD-ANNFTVENFLLGDGWMVQSGVPYISGL 571          
BLAST of CF834512 vs. ExPASy Swiss-Prot
Match: PME32_ARATH (Probable pectinesterase/pectinesterase inhibitor 32 OS=Arabidopsis thaliana GN=PME32 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 1.927e-33
Identity = 66/132 (50.00%), Postives = 89/132 (67.42%), Query Frame = 3
Query:    3 QGRTDPNQNTGTSIQKCEVIASSYLEPVKDSIRSYLGRPWKEYSTTVVMQSHIGDHIDPPGWSQWSGDFALKTLYYGEYLNRGPCAGTTKRMKWAGYHVITDPEQAKKFTVTELIGGGSGLKSTGVAYTEGL 398
            QGR DPN+ TG +IQ   + A + L    ++  +YLGRPWK YS TV MQ+++ D I+P GW +W+G+FAL TLYYGEY+N GP A   +R+KW GYHV+    +A  FTV++LI G   L STG+ +  GL
Sbjct:  394 QGRKDPNEPTGFTIQFSNIAADTDLLLNLNTTATYLGRPWKLYSRTVFMQNYMSDAINPVGWLEWNGNFALDTLYYGEYMNSGPGASLDRRVKWPGYHVLNTSAEANNFTVSQLIQGNLWLPSTGITFIAGL 525          
BLAST of CF834512 vs. ExPASy Swiss-Prot
Match: PME44_ARATH (Probable pectinesterase/pectinesterase inhibitor 44 OS=Arabidopsis thaliana GN=PME44 PE=2 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 2.516e-33
Identity = 64/132 (48.48%), Postives = 91/132 (68.94%), Query Frame = 3
Query:    3 QGRTDPNQNTGTSIQKCEVIASSYLEPVKDSIRSYLGRPWKEYSTTVVMQSHIGDHIDPPGWSQWSGDFALKTLYYGEYLNRGPCAGTTKRMKWAGYHVITDPEQAKKFTVTELIGGGSGLKSTGVAYTEGL 398
            QGR D NQ +G SIQ   + A + L P  ++ R+YLGRPWK YS TV +++++ D + P GW +W+ DFAL TL+YGE++N GP +G + R+KW GYHV  + +QA  FTV++ I G   L STGV +++GL
Sbjct:  392 QGRKDVNQPSGFSIQFSNISADADLVPYLNTTRTYLGRPWKLYSRTVFIRNNMSDVVRPEGWLEWNADFALDTLFYGEFMNYGPGSGLSSRVKWPGYHVFNNSDQANNFTVSQFIKGNLWLPSTGVTFSDGL 523          
BLAST of CF834512 vs. ExPASy Swiss-Prot
Match: PME_ACTDE (Pectinesterase OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 5.605e-33
Identity = 68/126 (53.97%), Postives = 82/126 (65.08%), Query Frame = 3
Query:    3 QGRTDPNQNTGTSIQKCEVIASSYLEPVKDSIRSYLGRPWKEYSTTVVMQSHIGDHIDPPGWSQWSGDFALKTLYYGEYLNRGPCAGTTKRMKWAGYHVITDPEQAKKFTVTELIGGGSGLKSTGV 380
            QGR DPNQNTG SI  C+V A++ L PV  S ++YLGRPWKEYS TV + S +   IDP GW +WSGDFAL TLYY EY N GP + TT R+ W GY V T+  +  +FTV   I G   L S  +
Sbjct:  189 QGRDDPNQNTGISILNCKVAAAADLIPVLSSFKTYLGRPWKEYSRTVFLLSQMESLIDPAGWLEWSGDFALTTLYYREYKNTGPGSNTTARVTWPGYAVTTNETEVIQFTVGNFIQGSQWLTSYNI 314          
BLAST of CF834512 vs. ExPASy Swiss-Prot
Match: PME17_ARATH (Probable pectinesterase/pectinesterase inhibitor 17 OS=Arabidopsis thaliana GN=PME17 PE=2 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 9.561e-33
Identity = 66/132 (50.00%), Postives = 88/132 (66.67%), Query Frame = 3
Query:    3 QGRTDPNQNTGTSIQKCEVIASSYLEPVKDSIRSYLGRPWKEYSTTVVMQSHIGDHIDPPGWSQWSGDFALKTLYYGEYLNRGPCAGTTKRMKWAGYHVITDPEQAKKFTVTELIGGGSGLKSTGVAYTEGL 398
            QGR+DPNQNTG  I    V A+S L PV  S ++YLGRPW++YS TV M++ +   IDP GW +W G+FALKTL+Y E+ N GP A T+ R+ W G+ V+    +A KFTV   + GGS + S+ V +T GL
Sbjct:  381 QGRSDPNQNTGIIIHNSRVTAASDLRPVLGSTKTYLGRPWRQYSRTVFMKTSLDSLIDPRGWLEWDGNFALKTLFYAEFQNTGPGASTSGRVTWPGFRVLGSASEASKFTVGTFLAGGSWIPSS-VPFTSGL 511          
BLAST of CF834512 vs. ExPASy Swiss-Prot
Match: PME16_ARATH (Probable pectinesterase/pectinesterase inhibitor 16 OS=Arabidopsis thaliana GN=PME16 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 9.561e-33
Identity = 69/132 (52.27%), Postives = 84/132 (63.64%), Query Frame = 3
Query:    3 QGRTDPNQNTGTSIQKCEVIASSYLEPVKDSIRSYLGRPWKEYSTTVVMQSHIGDHIDPPGWSQWSGDFALKTLYYGEYLNRGPCAGTTKRMKWAGYHVITDPEQAKKFTVTELIGGGSGLKSTGVAYTEGL 398
            QGR++P QNTG +IQ C + A S          +YLGRPWKEYS TVVMQS IG  I P GWS WSG F LK+L+YGEY N GP +  + R+KW+G H      +A+KFTV   I G   L STGV++  GL
Sbjct:  394 QGRSNPGQNTGIAIQNCRITAESM---------TYLGRPWKEYSRTVVMQSFIGGSIHPSGWSPWSGGFGLKSLFYGEYGNSGPGSSVSGRVKWSGCHPSLTVTEAEKFTVASFIDGNIWLPSTGVSFDPGL 516          
BLAST of CF834512 vs. ExPASy Swiss-Prot
Match: PME19_ARATH (Probable pectinesterase/pectinesterase inhibitor 19 OS=Arabidopsis thaliana GN=PME19 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 4.745e-32
Identity = 64/132 (48.48%), Postives = 91/132 (68.94%), Query Frame = 3
Query:    3 QGRTDPNQNTGTSIQKCEVIASSYLEPVKDSIRSYLGRPWKEYSTTVVMQSHIGDHIDPPGWSQWSGDFALKTLYYGEYLNRGPCAGTTKRMKWAGYHVITDPEQAKKFTVTELIGGGSGLKSTGVAYTEGL 398
            Q R   +  +G +IQKC + ASS L+    ++++YLGRPW+ +ST  VMQS IGD +DP GW+ W G+  L TL+Y EY NRGP A T++R+KW+G+ V+ DP+QA +FTV +L+ G + LK T + Y  GL
Sbjct:  395 QSRAFKDIYSGFTIQKCNITASSDLDTT--TVKTYLGRPWRIFSTVAVMQSFIGDLVDPAGWTPWEGETGLSTLHYREYQNRGPGAVTSRRVKWSGFKVMKDPKQATEFTVAKLLDGETWLKETRIPYESGL 524          
BLAST of CF834512 vs. ExPASy Swiss-Prot
Match: PME42_ARATH (Probable pectinesterase/pectinesterase inhibitor 42 OS=Arabidopsis thaliana GN=PME42 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.057e-31
Identity = 62/132 (46.97%), Postives = 90/132 (68.18%), Query Frame = 3
Query:    3 QGRTDPNQNTGTSIQKCEVIASSYLEPVKDSIRSYLGRPWKEYSTTVVMQSHIGDHIDPPGWSQWSGDFALKTLYYGEYLNRGPCAGTTKRMKWAGYHVITDPEQAKKFTVTELIGGGSGLKSTGVAYTEGL 398
            Q R   +  +G SIQ C + ASS L+    ++++YLGRPW+ +ST  V+QS IGD +DP GW+ W G+  L TL+Y EY NRGP A T++R+KW+G+ V+ DP+QA +FTV +L+ G + LK + + Y  GL
Sbjct:  395 QSRETKDDKSGFSIQNCNITASSDLDTA--TVKTYLGRPWRIFSTVAVLQSFIGDLVDPAGWTPWEGETGLSTLHYREYQNRGPGAVTSRRVKWSGFKVMKDPKQATEFTVAKLLDGETWLKESRIPYKSGL 524          
BLAST of CF834512 vs. ExPASy Swiss-Prot
Match: PME33_ARATH (Probable pectinesterase/pectinesterase inhibitor 33 OS=Arabidopsis thaliana GN=PME33 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.057e-31
Identity = 65/134 (48.51%), Postives = 88/134 (65.67%), Query Frame = 3
Query:    3 QGRTDPNQNTGTSIQKCEVIASSYLEPVKDSIRSYLGRPWKEYSTTVVMQSHIGDHIDPPGWSQW--SGDFALKTLYYGEYLNRGPCAGTTKRMKWAGYHVITDPEQAKKFTVTELIGGGSGLKSTGVAYTEGL 398
            QGR DP QNTG +I    +IA+S L+PV  + ++YLGRPW+ YS   +M+++I + I P GWS W    +FAL T++YGEY N GP + T  R++W G+H IT    A +FTV  LI GGS L +TGV +  GL
Sbjct:  461 QGRGDPFQNTGITIHSSRIIAASDLKPVIRAYKTYLGRPWQAYSRVTIMKTYIDNSISPLGWSPWLRGSNFALNTVFYGEYKNFGPGSSTRWRVRWKGFHAITSTAVASRFTVGSLIAGGSWLPATGVPFKSGL 594          
BLAST of CF834512 vs. ExPASy Swiss-Prot
Match: PME30_ARATH (Probable pectinesterase 30 OS=Arabidopsis thaliana GN=PME30 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 5.247e-31
Identity = 60/132 (45.45%), Postives = 89/132 (67.42%), Query Frame = 3
Query:    3 QGRTDPNQNTGTSIQKCEVIASSYLEPVKDSIRSYLGRPWKEYSTTVVMQSHIGDHIDPPGWSQWSGDFALKTLYYGEYLNRGPCAGTTKRMKWAGYHVITDPEQAKKFTVTELIGGGSGLKSTGVAYTEGL 398
            Q R   +  +G SIQ C +  SS L+    ++++YLGRPW+ +ST  V+QS IGD +DP GW+ W G+  L TL+Y EY NRGP A T++R+KW+G+ V+ DP++A +FTV +L+ G + LK + + Y  GL
Sbjct:  368 QSRATKDVKSGFSIQNCNITTSSDLDTA--TVKTYLGRPWRRFSTVAVLQSFIGDLVDPAGWTPWKGETGLSTLHYREYQNRGPGAVTSRRVKWSGFKVMKDPKKATEFTVAKLLDGETWLKESRIPYESGL 497          
The following BLAST results are available for this feature:
BLAST of CF834512 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
PME41_ARATH1.927e-3350.76Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME32_ARATH1.927e-3350.00Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME44_ARATH2.516e-3348.48Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME_ACTDE5.605e-3353.97Pectinesterase OS=Actinidia deliciosa PE=1 SV=1[more]
PME17_ARATH9.561e-3350.00Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME16_ARATH9.561e-3352.27Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME19_ARATH4.745e-3248.48Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME42_ARATH1.057e-3146.97Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME33_ARATH1.057e-3148.51Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME30_ARATH5.247e-3145.45Probable pectinesterase 30 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05K12_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05K12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834512 ID=CF834512; Name=CF834512; organism=Citrus sinensis; type=EST; length=471bp
CCCAAGGACGGACTGACCCAAATCAAAACACAGGGACTTCTATCCAAAAA
TGTGAAGTCATAGCAAGCTCATATCTGGAGCCCGTAAAGGACTCGATCCG
TTCTTACTTGGGCCGGCCTTGGAAAGAATACTCAACAACAGTTGTAATGC
AGTCACACATCGGGGATCATATCGATCCACCTGGATGGTCACAATGGAGT
GGAGATTTTGCACTGAAGACACTGTATTATGGGGAGTATCTGAATAGAGG
GCCATGCGCTGGGACTACCAAAAGAATGAAATGGGCTGGCTATCACGTTA
TTACAGACCCAGAACAAGCAAAAAAATTTACAGTAACTGAGCTTATCGGA
GGAGGGTCGGGGTTGAAATCAACTGGAGTTGCTTATACTGAGGGGCTGTG
ATGTCATCTCACCATATATCTTTTAAGCTTGTATTTGCCACTGCTTTCTA
TCAGTAGAATAATGAATGAAT
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