CF834512
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834512 vs. ExPASy Swiss-Prot
Match: PME43_ARATH (Putative pectinesterase/pectinesterase inhibitor 43 OS=Arabidopsis thaliana GN=PME43 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 5.259e-23 Identity = 51/128 (39.84%), Postives = 74/128 (57.81%), Query Frame = 3 Query: 3 QGRTDPNQNTGTSIQKCEVIASSYLEPVKDSIRSYLGRPWKEYSTTVVMQSHIGDHIDPPGWSQWSGDFALKTLYYGEYLNRGPCAGTTKRMKWAGYHVITDPEQAKKFTVTELIGGGSGLKSTGVAY 386 QGR D + TG I + + PVK R++LGRPWKE+S T++M + I D IDP GW +W+ FAL TL+Y EY NRG +G +R++W G I+D A++F + G + + T + Y Sbjct: 572 QGRKDRRETTGIVIHNSRITGDASYLPVKAKNRAFLGRPWKEFSRTIIMNTEIDDVIDPEGWLKWNETFALNTLFYTEYRNRGRGSGQGRRVRWRGIKRISD-RAAREFAPGNFLRGNTWIPQTRIPY 698
BLAST of CF834512 vs. ExPASy Swiss-Prot
Match: PME3_PHAVU (Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.172e-22 Identity = 57/135 (42.22%), Postives = 78/135 (57.78%), Query Frame = 3 Query: 3 QGRTDPNQNTGTSIQKCEVIASSYLEPVKDSIRS--YLGRPWKEYSTTVVMQSHIGDHIDPPGWSQWSGDF-ALKTLYYGEYLNRGPCAGTTKRMKWAGYHVITDPEQAKKFTVTELIGGGSGLKSTGVAYTEGL 398 QG+ DPNQNTG IQK S + P +++ + YLGRPWK++STTV+MQS IG ++P GW W + T++Y EY N GP A ++R+KWAGY A++FTV I G L + V + L Sbjct: 453 QGKKDPNQNTGIIIQK------STITPFGNNLTAPTYLGRPWKDFSTTVIMQSDIGALLNPVGWMSWVPNVEPPTTIFYAEYQNSGPGADVSQRVKWAGYKPTITDRNAEEFTVQSFIQGPEWLPNAAVQFDSTL 581
BLAST of CF834512 vs. ExPASy Swiss-Prot
Match: PME_PETIN (Pectinesterase OS=Petunia integrifolia GN=PPE1 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 2.610e-22 Identity = 54/134 (40.30%), Postives = 73/134 (54.48%), Query Frame = 3 Query: 3 QGRTDPNQNTGTSIQKCEVIASSYLEPVKDSIRSYLGRPWKEYSTTVVMQSHIGDHIDPPGWSQWS-GDFALKTLYYGEYLNRGPCAGTTKRMKWAGYHVITDPEQAKKFTVTELIGGGSG-LKSTGVAYTEGL 398 QGRT+P Q +Q CE+ + + ++YLGRPWKEYS T++MQS+I I+P GW+ W+ +F T YY EY NRGP A KR+ W G+ E A+KFT I L+ V Y G+ Sbjct: 238 QGRTEPIQKGAIVLQNCEIKPDTDYFSLSPPSKTYLGRPWKEYSRTIIMQSYIDKFIEPEGWAPWNITNFGRDTSYYAEYQNRGPGAALDKRITWKGFQKGFTGEAAQKFTAGVYINNDENWLQKANVPYEAGM 371
BLAST of CF834512 vs. ExPASy Swiss-Prot
Match: PME26_ARATH (Putative pectinesterase/pectinesterase inhibitor 26 OS=Arabidopsis thaliana GN=PME26 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 2.886e-21 Identity = 49/119 (41.18%), Postives = 73/119 (61.34%), Query Frame = 3 Query: 3 QGRTDPNQNTGTSIQKCEVIASSYLEPVKDSIRSYLGRPWKEYSTTVVMQSHIGDHIDPPGWSQWSG--DFALKTLYYGEYLNRGPCAGTTKRMKWAGYHVITDPEQAKKFTVTELIGG 353 +G + NQNTG SI +C + + + + +YLGRPWK +S TV+MQS IG ++P GW W+ D +T++Y EY N GP + +KR+KWAGY I+ ++A +FTV + G Sbjct: 840 EGTQEANQNTGISIHQCTISPNGNV-----TATTYLGRPWKLFSKTVIMQSVIGSFVNPAGWIAWNSTYDPPPRTIFYREYKNSGPGSDLSKRVKWAGYKPISSDDEAARFTVKYFLRG 953
BLAST of CF834512 vs. ExPASy Swiss-Prot
Match: PME37_ARATH (Probable pectinesterase/pectinesterase inhibitor VGDH2 OS=Arabidopsis thaliana GN=VGDH2 PE=2 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 2.068e-19 Identity = 47/122 (38.52%), Postives = 69/122 (56.56%), Query Frame = 3 Query: 33 GTSIQKCEVIASSYLEPVKDSIRSYLGRPWKEYSTTVVMQSHIGDHIDPPGWSQWSGDFALKTLYYGEYLNRGPCAGTTKRMKWAGYHVITDPEQAKKFTVTELIGGGSGLKSTGVAYTEGL 398 G + C +I LE K +I+SYLGRPWK+++TTV++ + IGD I P GW++W G+ KT Y E+ NRGP A TT+R W V + + +TV +G + ++ V GL Sbjct: 469 GIVLHNCRIIPDKELEADKLTIKSYLGRPWKKFATTVIIGTEIGDLIKPEGWTEWQGEQNHKTAKYIEFNNRGPGAATTQRPPWV--KVAKSAAEVETYTVANWVGPANWIQEANVPVQLGL 588
BLAST of CF834512 vs. ExPASy Swiss-Prot
Match: PME5_ARATH (Pectinesterase 5 OS=Arabidopsis thaliana GN=PME5 PE=2 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 2.286e-18 Identity = 46/122 (37.70%), Postives = 65/122 (53.28%), Query Frame = 3 Query: 33 GTSIQKCEVIASSYLEPVKDSIRSYLGRPWKEYSTTVVMQSHIGDHIDPPGWSQWSGDFALKTLYYGEYLNRGPCAGTTKRMKWAGYHVITDPEQAKKFTVTELIGGGSGLKSTGVAYTEGL 398 G +Q C ++ L + + SYLGRPWK++STTV++ S IGD I P GW W G+ K+ Y EY NRGP A T +R+ W + + FTV +G + ++ V T GL Sbjct: 476 GIVLQNCRIVPDKKLAAERLIVESYLGRPWKKFSTTVIINSEIGDVIRPEGWKIWDGESFHKSCRYVEYNNRGPGAITNRRVNWV--KIARSAAEVNDFTVANWLGPINWIQEANVPVTLGL 595
BLAST of CF834512 vs. ExPASy Swiss-Prot
Match: PME4_ARATH (Pectinesterase 4 OS=Arabidopsis thaliana GN=PME4 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 2.286e-18 Identity = 45/122 (36.89%), Postives = 66/122 (54.10%), Query Frame = 3 Query: 33 GTSIQKCEVIASSYLEPVKDSIRSYLGRPWKEYSTTVVMQSHIGDHIDPPGWSQWSGDFALKTLYYGEYLNRGPCAGTTKRMKWAGYHVITDPEQAKKFTVTELIGGGSGLKSTGVAYTEGL 398 G +Q C ++ L P + ++ +YLGRPWK++STTV+M + +GD I P GW W G+ K+ Y EY NRGP A +R+ WA V + FT +G + ++ V T GL Sbjct: 469 GIVLQNCRIVPDRKLTPERLTVATYLGRPWKKFSTTVIMSTEMGDLIRPEGWKIWDGESFHKSCRYVEYNNRGPGAFANRRVNWA--KVARSAAEVNGFTAANWLGPINWIQEANVPVTIGL 588
BLAST of CF834512 vs. ExPASy Swiss-Prot
Match: PME51_ARATH (Probable pectinesterase/pectinesterase inhibitor 51 OS=Arabidopsis thaliana GN=PME51 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.135e-17 Identity = 44/99 (44.44%), Postives = 63/99 (63.64%), Query Frame = 3 Query: 3 QGRTDPNQNTGTSIQKCEVIASS-YLEPVKDSIR---SYLGRPWKEYSTTVVMQSHIGDHIDPPGWSQWSGDFALKTLYYGEYLNRGPCAGTTKRMKWA 287 QGR DP+Q+TG C + + Y++ K + + ++LGRPWK+YS TV + ++ I P GW WSGDFALKTLYYGE N GP + ++R+ W+ Sbjct: 426 QGRIDPSQSTGFVFLNCLINGTEEYMKLFKANPKVHKNFLGRPWKDYSRTVFIGCNLEALITPDGWLPWSGDFALKTLYYGESKNTGPGSDRSQRVSWS 524
BLAST of CF834512 vs. ExPASy Swiss-Prot
Match: PME64_ARATH (Probable pectinesterase/pectinesterase inhibitor 64 OS=Arabidopsis thaliana GN=PME64 PE=2 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 1.936e-17 Identity = 41/98 (41.84%), Postives = 61/98 (62.24%), Query Frame = 3 Query: 6 GRTDPNQNTGTSIQKCEVIASS-YLEPVK---DSIRSYLGRPWKEYSTTVVMQSHIGDHIDPPGWSQWSGDFALKTLYYGEYLNRGPCAGTTKRMKWA 287 GR D +Q+TG C + + Y++ + + +++LGRPWKE+S TV + ++ I P GW W+GDFALKTLYYGEY N GP + + R+ W+ Sbjct: 478 GRIDASQSTGFVFLNCSINGTEEYMKEFQANPEGHKNFLGRPWKEFSRTVFVNCNLESLISPDGWMPWNGDFALKTLYYGEYKNTGPGSVRSSRVPWS 575
BLAST of CF834512 vs. ExPASy Swiss-Prot
Match: PME_BRANA (Probable pectinesterase/pectinesterase inhibitor OS=Brassica napus GN=BP19 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 2.528e-17 Identity = 43/122 (35.25%), Postives = 67/122 (54.92%), Query Frame = 3 Query: 33 GTSIQKCEVIASSYLEPVKDSIRSYLGRPWKEYSTTVVMQSHIGDHIDPPGWSQWSGDFALKTLYYGEYLNRGPCAGTTKRMKWAGYHVITDPEQAKKFTVTELIGGGSGLKSTGVAYTEGL 398 G + C ++A LE + +++SYLGRPWK ++TT V+ + IGD I P GW++W G+ T Y E+ NRGP A T R+ WA + + ++FTV + + ++ V GL Sbjct: 465 GIVLHNCRIMADKELEADRLTVKSYLGRPWKPFATTAVIGTEIGDLIQPTGWNEWQGEKFHLTATYVEFNNRGPGANTAARVPWA--KMAKSAAEVERFTVANWLTPANWIQEANVPVQLGL 584 The following BLAST results are available for this feature:
BLAST of CF834512 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834512 ID=CF834512; Name=CF834512; organism=Citrus sinensis; type=EST; length=471bpback to top |