CF834512

Overview
NameCF834512
Unique NameCF834512
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length471
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834512 vs. ExPASy Swiss-Prot
Match: PME43_ARATH (Putative pectinesterase/pectinesterase inhibitor 43 OS=Arabidopsis thaliana GN=PME43 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 5.259e-23
Identity = 51/128 (39.84%), Postives = 74/128 (57.81%), Query Frame = 3
Query:    3 QGRTDPNQNTGTSIQKCEVIASSYLEPVKDSIRSYLGRPWKEYSTTVVMQSHIGDHIDPPGWSQWSGDFALKTLYYGEYLNRGPCAGTTKRMKWAGYHVITDPEQAKKFTVTELIGGGSGLKSTGVAY 386
            QGR D  + TG  I    +   +   PVK   R++LGRPWKE+S T++M + I D IDP GW +W+  FAL TL+Y EY NRG  +G  +R++W G   I+D   A++F     + G + +  T + Y
Sbjct:  572 QGRKDRRETTGIVIHNSRITGDASYLPVKAKNRAFLGRPWKEFSRTIIMNTEIDDVIDPEGWLKWNETFALNTLFYTEYRNRGRGSGQGRRVRWRGIKRISD-RAAREFAPGNFLRGNTWIPQTRIPY 698          
BLAST of CF834512 vs. ExPASy Swiss-Prot
Match: PME3_PHAVU (Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.172e-22
Identity = 57/135 (42.22%), Postives = 78/135 (57.78%), Query Frame = 3
Query:    3 QGRTDPNQNTGTSIQKCEVIASSYLEPVKDSIRS--YLGRPWKEYSTTVVMQSHIGDHIDPPGWSQWSGDF-ALKTLYYGEYLNRGPCAGTTKRMKWAGYHVITDPEQAKKFTVTELIGGGSGLKSTGVAYTEGL 398
            QG+ DPNQNTG  IQK      S + P  +++ +  YLGRPWK++STTV+MQS IG  ++P GW  W  +     T++Y EY N GP A  ++R+KWAGY        A++FTV   I G   L +  V +   L
Sbjct:  453 QGKKDPNQNTGIIIQK------STITPFGNNLTAPTYLGRPWKDFSTTVIMQSDIGALLNPVGWMSWVPNVEPPTTIFYAEYQNSGPGADVSQRVKWAGYKPTITDRNAEEFTVQSFIQGPEWLPNAAVQFDSTL 581          
BLAST of CF834512 vs. ExPASy Swiss-Prot
Match: PME_PETIN (Pectinesterase OS=Petunia integrifolia GN=PPE1 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 2.610e-22
Identity = 54/134 (40.30%), Postives = 73/134 (54.48%), Query Frame = 3
Query:    3 QGRTDPNQNTGTSIQKCEVIASSYLEPVKDSIRSYLGRPWKEYSTTVVMQSHIGDHIDPPGWSQWS-GDFALKTLYYGEYLNRGPCAGTTKRMKWAGYHVITDPEQAKKFTVTELIGGGSG-LKSTGVAYTEGL 398
            QGRT+P Q     +Q CE+   +    +    ++YLGRPWKEYS T++MQS+I   I+P GW+ W+  +F   T YY EY NRGP A   KR+ W G+      E A+KFT    I      L+   V Y  G+
Sbjct:  238 QGRTEPIQKGAIVLQNCEIKPDTDYFSLSPPSKTYLGRPWKEYSRTIIMQSYIDKFIEPEGWAPWNITNFGRDTSYYAEYQNRGPGAALDKRITWKGFQKGFTGEAAQKFTAGVYINNDENWLQKANVPYEAGM 371          
BLAST of CF834512 vs. ExPASy Swiss-Prot
Match: PME26_ARATH (Putative pectinesterase/pectinesterase inhibitor 26 OS=Arabidopsis thaliana GN=PME26 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 2.886e-21
Identity = 49/119 (41.18%), Postives = 73/119 (61.34%), Query Frame = 3
Query:    3 QGRTDPNQNTGTSIQKCEVIASSYLEPVKDSIRSYLGRPWKEYSTTVVMQSHIGDHIDPPGWSQWSG--DFALKTLYYGEYLNRGPCAGTTKRMKWAGYHVITDPEQAKKFTVTELIGG 353
            +G  + NQNTG SI +C +  +  +     +  +YLGRPWK +S TV+MQS IG  ++P GW  W+   D   +T++Y EY N GP +  +KR+KWAGY  I+  ++A +FTV   + G
Sbjct:  840 EGTQEANQNTGISIHQCTISPNGNV-----TATTYLGRPWKLFSKTVIMQSVIGSFVNPAGWIAWNSTYDPPPRTIFYREYKNSGPGSDLSKRVKWAGYKPISSDDEAARFTVKYFLRG 953          
BLAST of CF834512 vs. ExPASy Swiss-Prot
Match: PME37_ARATH (Probable pectinesterase/pectinesterase inhibitor VGDH2 OS=Arabidopsis thaliana GN=VGDH2 PE=2 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 2.068e-19
Identity = 47/122 (38.52%), Postives = 69/122 (56.56%), Query Frame = 3
Query:   33 GTSIQKCEVIASSYLEPVKDSIRSYLGRPWKEYSTTVVMQSHIGDHIDPPGWSQWSGDFALKTLYYGEYLNRGPCAGTTKRMKWAGYHVITDPEQAKKFTVTELIGGGSGLKSTGVAYTEGL 398
            G  +  C +I    LE  K +I+SYLGRPWK+++TTV++ + IGD I P GW++W G+   KT  Y E+ NRGP A TT+R  W    V     + + +TV   +G  + ++   V    GL
Sbjct:  469 GIVLHNCRIIPDKELEADKLTIKSYLGRPWKKFATTVIIGTEIGDLIKPEGWTEWQGEQNHKTAKYIEFNNRGPGAATTQRPPWV--KVAKSAAEVETYTVANWVGPANWIQEANVPVQLGL 588          
BLAST of CF834512 vs. ExPASy Swiss-Prot
Match: PME5_ARATH (Pectinesterase 5 OS=Arabidopsis thaliana GN=PME5 PE=2 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 2.286e-18
Identity = 46/122 (37.70%), Postives = 65/122 (53.28%), Query Frame = 3
Query:   33 GTSIQKCEVIASSYLEPVKDSIRSYLGRPWKEYSTTVVMQSHIGDHIDPPGWSQWSGDFALKTLYYGEYLNRGPCAGTTKRMKWAGYHVITDPEQAKKFTVTELIGGGSGLKSTGVAYTEGL 398
            G  +Q C ++    L   +  + SYLGRPWK++STTV++ S IGD I P GW  W G+   K+  Y EY NRGP A T +R+ W    +     +   FTV   +G  + ++   V  T GL
Sbjct:  476 GIVLQNCRIVPDKKLAAERLIVESYLGRPWKKFSTTVIINSEIGDVIRPEGWKIWDGESFHKSCRYVEYNNRGPGAITNRRVNWV--KIARSAAEVNDFTVANWLGPINWIQEANVPVTLGL 595          
BLAST of CF834512 vs. ExPASy Swiss-Prot
Match: PME4_ARATH (Pectinesterase 4 OS=Arabidopsis thaliana GN=PME4 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 2.286e-18
Identity = 45/122 (36.89%), Postives = 66/122 (54.10%), Query Frame = 3
Query:   33 GTSIQKCEVIASSYLEPVKDSIRSYLGRPWKEYSTTVVMQSHIGDHIDPPGWSQWSGDFALKTLYYGEYLNRGPCAGTTKRMKWAGYHVITDPEQAKKFTVTELIGGGSGLKSTGVAYTEGL 398
            G  +Q C ++    L P + ++ +YLGRPWK++STTV+M + +GD I P GW  W G+   K+  Y EY NRGP A   +R+ WA   V     +   FT    +G  + ++   V  T GL
Sbjct:  469 GIVLQNCRIVPDRKLTPERLTVATYLGRPWKKFSTTVIMSTEMGDLIRPEGWKIWDGESFHKSCRYVEYNNRGPGAFANRRVNWA--KVARSAAEVNGFTAANWLGPINWIQEANVPVTIGL 588          
BLAST of CF834512 vs. ExPASy Swiss-Prot
Match: PME51_ARATH (Probable pectinesterase/pectinesterase inhibitor 51 OS=Arabidopsis thaliana GN=PME51 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.135e-17
Identity = 44/99 (44.44%), Postives = 63/99 (63.64%), Query Frame = 3
Query:    3 QGRTDPNQNTGTSIQKCEVIASS-YLEPVKDSIR---SYLGRPWKEYSTTVVMQSHIGDHIDPPGWSQWSGDFALKTLYYGEYLNRGPCAGTTKRMKWA 287
            QGR DP+Q+TG     C +  +  Y++  K + +   ++LGRPWK+YS TV +  ++   I P GW  WSGDFALKTLYYGE  N GP +  ++R+ W+
Sbjct:  426 QGRIDPSQSTGFVFLNCLINGTEEYMKLFKANPKVHKNFLGRPWKDYSRTVFIGCNLEALITPDGWLPWSGDFALKTLYYGESKNTGPGSDRSQRVSWS 524          
BLAST of CF834512 vs. ExPASy Swiss-Prot
Match: PME64_ARATH (Probable pectinesterase/pectinesterase inhibitor 64 OS=Arabidopsis thaliana GN=PME64 PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 1.936e-17
Identity = 41/98 (41.84%), Postives = 61/98 (62.24%), Query Frame = 3
Query:    6 GRTDPNQNTGTSIQKCEVIASS-YLEPVK---DSIRSYLGRPWKEYSTTVVMQSHIGDHIDPPGWSQWSGDFALKTLYYGEYLNRGPCAGTTKRMKWA 287
            GR D +Q+TG     C +  +  Y++  +   +  +++LGRPWKE+S TV +  ++   I P GW  W+GDFALKTLYYGEY N GP +  + R+ W+
Sbjct:  478 GRIDASQSTGFVFLNCSINGTEEYMKEFQANPEGHKNFLGRPWKEFSRTVFVNCNLESLISPDGWMPWNGDFALKTLYYGEYKNTGPGSVRSSRVPWS 575          
BLAST of CF834512 vs. ExPASy Swiss-Prot
Match: PME_BRANA (Probable pectinesterase/pectinesterase inhibitor OS=Brassica napus GN=BP19 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 2.528e-17
Identity = 43/122 (35.25%), Postives = 67/122 (54.92%), Query Frame = 3
Query:   33 GTSIQKCEVIASSYLEPVKDSIRSYLGRPWKEYSTTVVMQSHIGDHIDPPGWSQWSGDFALKTLYYGEYLNRGPCAGTTKRMKWAGYHVITDPEQAKKFTVTELIGGGSGLKSTGVAYTEGL 398
            G  +  C ++A   LE  + +++SYLGRPWK ++TT V+ + IGD I P GW++W G+    T  Y E+ NRGP A T  R+ WA   +     + ++FTV   +   + ++   V    GL
Sbjct:  465 GIVLHNCRIMADKELEADRLTVKSYLGRPWKPFATTAVIGTEIGDLIQPTGWNEWQGEKFHLTATYVEFNNRGPGANTAARVPWA--KMAKSAAEVERFTVANWLTPANWIQEANVPVQLGL 584          
The following BLAST results are available for this feature:
BLAST of CF834512 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
PME43_ARATH5.259e-2339.84Putative pectinesterase/pectinesterase inhibitor 4... [more]
PME3_PHAVU1.172e-2242.22Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=... [more]
PME_PETIN2.610e-2240.30Pectinesterase OS=Petunia integrifolia GN=PPE1 PE=... [more]
PME26_ARATH2.886e-2141.18Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME37_ARATH2.068e-1938.52Probable pectinesterase/pectinesterase inhibitor V... [more]
PME5_ARATH2.286e-1837.70Pectinesterase 5 OS=Arabidopsis thaliana GN=PME5 P... [more]
PME4_ARATH2.286e-1836.89Pectinesterase 4 OS=Arabidopsis thaliana GN=PME4 P... [more]
PME51_ARATH1.135e-1744.44Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME64_ARATH1.936e-1741.84Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME_BRANA2.528e-1735.25Probable pectinesterase/pectinesterase inhibitor O... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05K12_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05K12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834512 ID=CF834512; Name=CF834512; organism=Citrus sinensis; type=EST; length=471bp
CCCAAGGACGGACTGACCCAAATCAAAACACAGGGACTTCTATCCAAAAA
TGTGAAGTCATAGCAAGCTCATATCTGGAGCCCGTAAAGGACTCGATCCG
TTCTTACTTGGGCCGGCCTTGGAAAGAATACTCAACAACAGTTGTAATGC
AGTCACACATCGGGGATCATATCGATCCACCTGGATGGTCACAATGGAGT
GGAGATTTTGCACTGAAGACACTGTATTATGGGGAGTATCTGAATAGAGG
GCCATGCGCTGGGACTACCAAAAGAATGAAATGGGCTGGCTATCACGTTA
TTACAGACCCAGAACAAGCAAAAAAATTTACAGTAACTGAGCTTATCGGA
GGAGGGTCGGGGTTGAAATCAACTGGAGTTGCTTATACTGAGGGGCTGTG
ATGTCATCTCACCATATATCTTTTAAGCTTGTATTTGCCACTGCTTTCTA
TCAGTAGAATAATGAATGAAT
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