CF834514

Overview
NameCF834514
Unique NameCF834514
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length601
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF834514 vs. ExPASy Swiss-Prot
Match: CHS3_TRISU (Chalcone synthase 3 OS=Trifolium subterraneum GN=CHS3 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.349e-12
Identity = 34/37 (91.89%), Postives = 36/37 (97.30%), Query Frame = 2 
Query:  446 AENNKGARVLVGCSEITAVTFRGPADTHLDSLVGQAL 556
            AENNKGARVLV CSE+TAVTFRGP+DTHLDSLVGQAL
Sbjct:  178 AENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQAL 214
[Close]
BLAST of CF834514 vs. ExPASy Swiss-Prot
Match: CHS3_SOYBN (Chalcone synthase 3 OS=Glycine max GN=CHS3 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.349e-12
Identity = 35/37 (94.59%), Postives = 35/37 (94.59%), Query Frame = 2 
Query:  446 AENNKGARVLVGCSEITAVTFRGPADTHLDSLVGQAL 556
            AENNKGARVLV CSEITAVTFRGP DTHLDSLVGQAL
Sbjct:  178 AENNKGARVLVVCSEITAVTFRGPTDTHLDSLVGQAL 214
[Close]
BLAST of CF834514 vs. ExPASy Swiss-Prot
Match: CHS3_PEA (Chalcone synthase 3 OS=Pisum sativum GN=CHS3 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.349e-12
Identity = 34/37 (91.89%), Postives = 36/37 (97.30%), Query Frame = 2 
Query:  446 AENNKGARVLVGCSEITAVTFRGPADTHLDSLVGQAL 556
            AENNKGARVLV CSE+TAVTFRGP+DTHLDSLVGQAL
Sbjct:  178 AENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQAL 214
[Close]
BLAST of CF834514 vs. ExPASy Swiss-Prot
Match: CHS3_MEDSA (Chalcone synthase 4-1 OS=Medicago sativa GN=CHS4-1 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.349e-12
Identity = 34/37 (91.89%), Postives = 36/37 (97.30%), Query Frame = 2 
Query:  446 AENNKGARVLVGCSEITAVTFRGPADTHLDSLVGQAL 556
            AENNKGARVLV CSE+TAVTFRGP+DTHLDSLVGQAL
Sbjct:  178 AENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQAL 214
[Close]
BLAST of CF834514 vs. ExPASy Swiss-Prot
Match: CHS2_TRISU (Chalcone synthase 2 OS=Trifolium subterraneum GN=CHS2 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.349e-12
Identity = 34/37 (91.89%), Postives = 36/37 (97.30%), Query Frame = 2 
Query:  446 AENNKGARVLVGCSEITAVTFRGPADTHLDSLVGQAL 556
            AENNKGARVLV CSE+TAVTFRGP+DTHLDSLVGQAL
Sbjct:  178 AENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQAL 214
[Close]
BLAST of CF834514 vs. ExPASy Swiss-Prot
Match: CHS2_SOYBN (Chalcone synthase 2 OS=Glycine max GN=CHS2 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.349e-12
Identity = 35/37 (94.59%), Postives = 35/37 (94.59%), Query Frame = 2 
Query:  446 AENNKGARVLVGCSEITAVTFRGPADTHLDSLVGQAL 556
            AENNKGARVLV CSEITAVTFRGP DTHLDSLVGQAL
Sbjct:  178 AENNKGARVLVVCSEITAVTFRGPTDTHLDSLVGQAL 214
[Close]
BLAST of CF834514 vs. ExPASy Swiss-Prot
Match: CHS2_MEDSA (Chalcone synthase 2 OS=Medicago sativa GN=CHS2 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.349e-12
Identity = 34/37 (91.89%), Postives = 36/37 (97.30%), Query Frame = 2 
Query:  446 AENNKGARVLVGCSEITAVTFRGPADTHLDSLVGQAL 556
            AENNKGARVLV CSE+TAVTFRGP+DTHLDSLVGQAL
Sbjct:  178 AENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQAL 214
[Close]
BLAST of CF834514 vs. ExPASy Swiss-Prot
Match: CHS1_TRISU (Chalcone synthase 1 OS=Trifolium subterraneum GN=CHS1 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.349e-12
Identity = 34/37 (91.89%), Postives = 36/37 (97.30%), Query Frame = 2 
Query:  446 AENNKGARVLVGCSEITAVTFRGPADTHLDSLVGQAL 556
            AENNKGARVLV CSE+TAVTFRGP+DTHLDSLVGQAL
Sbjct:  178 AENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQAL 214
[Close]
BLAST of CF834514 vs. ExPASy Swiss-Prot
Match: CHS1_SOYBN (Chalcone synthase 1 OS=Glycine max GN=CHS1 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.349e-12
Identity = 35/37 (94.59%), Postives = 35/37 (94.59%), Query Frame = 2 
Query:  446 AENNKGARVLVGCSEITAVTFRGPADTHLDSLVGQAL 556
            AENNKGARVLV CSEITAVTFRGP DTHLDSLVGQAL
Sbjct:  178 AENNKGARVLVVCSEITAVTFRGPTDTHLDSLVGQAL 214
[Close]
BLAST of CF834514 vs. ExPASy Swiss-Prot
Match: CHS1_PEA (Chalcone synthase 1 OS=Pisum sativum GN=CHS1 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.349e-12
Identity = 34/37 (91.89%), Postives = 36/37 (97.30%), Query Frame = 2 
Query:  446 AENNKGARVLVGCSEITAVTFRGPADTHLDSLVGQAL 556
            AENNKGARVLV CSE+TAVTFRGP+DTHLDSLVGQAL
Sbjct:  178 AENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQAL 214
The following BLAST results are available for this feature:
BLAST of CF834514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
CHS3_TRISU3.349e-1291.89Chalcone synthase 3 OS=Trifolium subterraneum GN=C... [more]
CHS3_SOYBN3.349e-1294.59Chalcone synthase 3 OS=Glycine max GN=CHS3 PE=3 SV... [more]
CHS3_PEA3.349e-1291.89Chalcone synthase 3 OS=Pisum sativum GN=CHS3 PE=3 ... [more]
CHS3_MEDSA3.349e-1291.89Chalcone synthase 4-1 OS=Medicago sativa GN=CHS4-1... [more]
CHS2_TRISU3.349e-1291.89Chalcone synthase 2 OS=Trifolium subterraneum GN=C... [more]
CHS2_SOYBN3.349e-1294.59Chalcone synthase 2 OS=Glycine max GN=CHS2 PE=3 SV... [more]
CHS2_MEDSA3.349e-1291.89Chalcone synthase 2 OS=Medicago sativa GN=CHS2 PE=... [more]
CHS1_TRISU3.349e-1291.89Chalcone synthase 1 OS=Trifolium subterraneum GN=C... [more]
CHS1_SOYBN3.349e-1294.59Chalcone synthase 1 OS=Glycine max GN=CHS1 PE=3 SV... [more]
CHS1_PEA3.349e-1291.89Chalcone synthase 1 OS=Pisum sativum GN=CHS1 PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05K13_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05K13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834514 ID=CF834514; Name=CF834514; organism=Citrus sinensis; type=EST; length=601bp
CGAGTTTTTTTCTTTTAATTATTAACAAATGTCTGGATCTTGATATATAT
ACCTCGGATCAGACGGATATACTTTAAGCTTACATATCACATATGTTAAA
ACTGCAAAAAACTTGAAAAAAGCTAACCGATTATTCAAAACACGACCCAA
AATAAAAGAACTCTTAAAAACTTATAACCGACTTATCAAAAGTGAAGAAA
GGCTAACACAAAACCGACTTGATTAACTGACATTATCCTAAAATTAAAGA
AGCATGAAATGAAATTGTAGAAATATCAAGGGTGAAGTAGGCCACCACCA
CAGTTACTGCCACTTCCACCCCCGAGACCCCCTCCGGCACCTCCACCAAA
TCCGCCACCAGCGCCGCCACCGATACCACTGACAAGGCCACCACCTGAAC
CACCGCCGAGGCCACCTCCGGCACCGCCTCCGAGGCCCCCGCTTGGCTGA
GAACAACAAGGGCGCTCGCGTTCTTGTTGGCTGTTCGGAGATCACGGCAG
TCACTTTCCGCGGCCCTGCCGATACTCATCTTGATTCTCTTGTGGGCCAG
GCTTTGATCGGTGATGGTGCTGCTGCTGTGATCGTGGGTGCCGATCCTGA
C
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