CF834514

Overview
NameCF834514
Unique NameCF834514
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length601
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF834514 vs. ExPASy Swiss-Prot
Match: CHS2_SOLTU (Chalcone synthase 2 OS=Solanum tuberosum GN=CHS2 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.171e-11
Identity = 33/37 (89.19%), Postives = 35/37 (94.59%), Query Frame = 2 
Query:  446 AENNKGARVLVGCSEITAVTFRGPADTHLDSLVGQAL 556
            AENNKGARVLV CSEITAVTF GP+DTHLDS+VGQAL
Sbjct:  178 AENNKGARVLVVCSEITAVTFSGPSDTHLDSMVGQAL 214
[Close]
BLAST of CF834514 vs. ExPASy Swiss-Prot
Match: CHS1_SOLLC (Chalcone synthase 1 OS=Solanum lycopersicum GN=CHS1 PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 2.171e-11
Identity = 33/37 (89.19%), Postives = 36/37 (97.30%), Query Frame = 2 
Query:  446 AENNKGARVLVGCSEITAVTFRGPADTHLDSLVGQAL 556
            AENNKGARVLV CSEITAVTFRGP+++HLDSLVGQAL
Sbjct:  178 AENNKGARVLVVCSEITAVTFRGPSESHLDSLVGQAL 214
[Close]
BLAST of CF834514 vs. ExPASy Swiss-Prot
Match: CHSY_VITVI (Chalcone synthase OS=Vitis vinifera GN=CHS PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.836e-11
Identity = 33/37 (89.19%), Postives = 35/37 (94.59%), Query Frame = 2 
Query:  446 AENNKGARVLVGCSEITAVTFRGPADTHLDSLVGQAL 556
            AENN G+RVLV CSEITAVTFRGP+DTHLDSLVGQAL
Sbjct:  178 AENNAGSRVLVVCSEITAVTFRGPSDTHLDSLVGQAL 214
[Close]
BLAST of CF834514 vs. ExPASy Swiss-Prot
Match: CHS8_IPOBA (Chalcone synthase DIV OS=Ipomoea batatas GN=CHS-DIV PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.836e-11
Identity = 32/37 (86.49%), Postives = 35/37 (94.59%), Query Frame = 2 
Query:  446 AENNKGARVLVGCSEITAVTFRGPADTHLDSLVGQAL 556
            AENNKGARVL+ CSEIT VTFRGP++THLDSLVGQAL
Sbjct:  178 AENNKGARVLIVCSEITVVTFRGPSETHLDSLVGQAL 214
[Close]
BLAST of CF834514 vs. ExPASy Swiss-Prot
Match: CHS7_IPOBA (Chalcone synthase DIII OS=Ipomoea batatas GN=CHS-DIII PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.836e-11
Identity = 32/37 (86.49%), Postives = 35/37 (94.59%), Query Frame = 2 
Query:  446 AENNKGARVLVGCSEITAVTFRGPADTHLDSLVGQAL 556
            AENNKGARVL+ CSEIT VTFRGP++THLDSLVGQAL
Sbjct:  178 AENNKGARVLIVCSEITVVTFRGPSETHLDSLVGQAL 214
[Close]
BLAST of CF834514 vs. ExPASy Swiss-Prot
Match: CHS6_IPOBA (Chalcone synthase DII OS=Ipomoea batatas GN=CHS-DII PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.836e-11
Identity = 32/37 (86.49%), Postives = 35/37 (94.59%), Query Frame = 2 
Query:  446 AENNKGARVLVGCSEITAVTFRGPADTHLDSLVGQAL 556
            AENNKGARVL+ CSEIT VTFRGP++THLDSLVGQAL
Sbjct:  178 AENNKGARVLIVCSEITVVTFRGPSETHLDSLVGQAL 214
[Close]
BLAST of CF834514 vs. ExPASy Swiss-Prot
Match: CHS4_IPOBA (Chalcone synthase LF4 OS=Ipomoea batatas GN=CHS-LF4 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.836e-11
Identity = 32/37 (86.49%), Postives = 35/37 (94.59%), Query Frame = 2 
Query:  446 AENNKGARVLVGCSEITAVTFRGPADTHLDSLVGQAL 556
            AENNKGARVL+ CSEIT VTFRGP++THLDSLVGQAL
Sbjct:  178 AENNKGARVLIVCSEITVVTFRGPSETHLDSLVGQAL 214
[Close]
BLAST of CF834514 vs. ExPASy Swiss-Prot
Match: CHS2_IPOBA (Chalcone synthase LF2 OS=Ipomoea batatas GN=CHS-LF2 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.836e-11
Identity = 32/37 (86.49%), Postives = 35/37 (94.59%), Query Frame = 2 
Query:  446 AENNKGARVLVGCSEITAVTFRGPADTHLDSLVGQAL 556
            AENNKGARVL+ CSEIT VTFRGP++THLDSLVGQAL
Sbjct:  178 AENNKGARVLIVCSEITVVTFRGPSETHLDSLVGQAL 214
[Close]
BLAST of CF834514 vs. ExPASy Swiss-Prot
Match: CHS1_IPOBA (Chalcone synthase LF1 OS=Ipomoea batatas GN=CHS-LF1 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.836e-11
Identity = 32/37 (86.49%), Postives = 35/37 (94.59%), Query Frame = 2 
Query:  446 AENNKGARVLVGCSEITAVTFRGPADTHLDSLVGQAL 556
            AENNKGARVL+ CSEIT VTFRGP++THLDSLVGQAL
Sbjct:  178 AENNKGARVLIVCSEITVVTFRGPSETHLDSLVGQAL 214
[Close]
BLAST of CF834514 vs. ExPASy Swiss-Prot
Match: CHSY_PETCR (Chalcone synthase OS=Petroselinum crispum GN=CHS PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.703e-11
Identity = 33/37 (89.19%), Postives = 35/37 (94.59%), Query Frame = 2 
Query:  446 AENNKGARVLVGCSEITAVTFRGPADTHLDSLVGQAL 556
            AENN GARVLV CSEITAVTFRGP+D+HLDSLVGQAL
Sbjct:  183 AENNAGARVLVVCSEITAVTFRGPSDSHLDSLVGQAL 219
The following BLAST results are available for this feature:
BLAST of CF834514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
CHS2_SOLTU2.171e-1189.19Chalcone synthase 2 OS=Solanum tuberosum GN=CHS2 P... [more]
CHS1_SOLLC2.171e-1189.19Chalcone synthase 1 OS=Solanum lycopersicum GN=CHS... [more]
CHSY_VITVI2.836e-1189.19Chalcone synthase OS=Vitis vinifera GN=CHS PE=2 SV... [more]
CHS8_IPOBA2.836e-1186.49Chalcone synthase DIV OS=Ipomoea batatas GN=CHS-DI... [more]
CHS7_IPOBA2.836e-1186.49Chalcone synthase DIII OS=Ipomoea batatas GN=CHS-D... [more]
CHS6_IPOBA2.836e-1186.49Chalcone synthase DII OS=Ipomoea batatas GN=CHS-DI... [more]
CHS4_IPOBA2.836e-1186.49Chalcone synthase LF4 OS=Ipomoea batatas GN=CHS-LF... [more]
CHS2_IPOBA2.836e-1186.49Chalcone synthase LF2 OS=Ipomoea batatas GN=CHS-LF... [more]
CHS1_IPOBA2.836e-1186.49Chalcone synthase LF1 OS=Ipomoea batatas GN=CHS-LF... [more]
CHSY_PETCR3.703e-1189.19Chalcone synthase OS=Petroselinum crispum GN=CHS P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05K13_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05K13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834514 ID=CF834514; Name=CF834514; organism=Citrus sinensis; type=EST; length=601bp
CGAGTTTTTTTCTTTTAATTATTAACAAATGTCTGGATCTTGATATATAT
ACCTCGGATCAGACGGATATACTTTAAGCTTACATATCACATATGTTAAA
ACTGCAAAAAACTTGAAAAAAGCTAACCGATTATTCAAAACACGACCCAA
AATAAAAGAACTCTTAAAAACTTATAACCGACTTATCAAAAGTGAAGAAA
GGCTAACACAAAACCGACTTGATTAACTGACATTATCCTAAAATTAAAGA
AGCATGAAATGAAATTGTAGAAATATCAAGGGTGAAGTAGGCCACCACCA
CAGTTACTGCCACTTCCACCCCCGAGACCCCCTCCGGCACCTCCACCAAA
TCCGCCACCAGCGCCGCCACCGATACCACTGACAAGGCCACCACCTGAAC
CACCGCCGAGGCCACCTCCGGCACCGCCTCCGAGGCCCCCGCTTGGCTGA
GAACAACAAGGGCGCTCGCGTTCTTGTTGGCTGTTCGGAGATCACGGCAG
TCACTTTCCGCGGCCCTGCCGATACTCATCTTGATTCTCTTGTGGGCCAG
GCTTTGATCGGTGATGGTGCTGCTGCTGTGATCGTGGGTGCCGATCCTGA
C
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