CF834520
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834520 vs. ExPASy Swiss-Prot
Match: NEDD8_HUMAN (NEDD8 OS=Homo sapiens GN=NEDD8 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.159e-12 Identity = 32/57 (56.14%), Postives = 44/57 (77.19%), Query Frame = -2 Query: 411 SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 581 +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY I S LHLVL LRGG Sbjct: 20 TDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76
BLAST of CF834520 vs. ExPASy Swiss-Prot
Match: NEDD8_BOVIN (NEDD8 OS=Bos taurus GN=NEDD8 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.159e-12 Identity = 32/57 (56.14%), Postives = 44/57 (77.19%), Query Frame = -2 Query: 411 SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 581 +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY I S LHLVL LRGG Sbjct: 20 TDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76
BLAST of CF834520 vs. ExPASy Swiss-Prot
Match: RS27B_SCHPO (40S ribosomal protein S27b OS=Schizosaccharomyces pombe GN=ubi5 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.514e-12 Identity = 33/47 (70.21%), Postives = 39/47 (82.98%), Query Frame = -2 Query: 201 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGL 341 LAVL++YKV+D G V+RLR+ECPN CGA TFMANH DR YCG+C L Sbjct: 24 LAVLKYYKVEDDGSVKRLRRECPN--CGASTFMANHKDRLYCGRCHL 68
BLAST of CF834520 vs. ExPASy Swiss-Prot
Match: RS27A_SCHPO (40S ribosomal protein S27a OS=Schizosaccharomyces pombe GN=ubi3 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.514e-12 Identity = 33/47 (70.21%), Postives = 39/47 (82.98%), Query Frame = -2 Query: 201 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGL 341 LAVL++YKV+D G V+RLR+ECPN CGA TFMANH DR YCG+C L Sbjct: 24 LAVLKYYKVEDDGSVKRLRRECPN--CGASTFMANHKDRLYCGRCHL 68
BLAST of CF834520 vs. ExPASy Swiss-Prot
Match: RS27A_CAEBR (40S ribosomal protein S27a OS=Caenorhabditis briggsae GN=ubl-1 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.514e-12 Identity = 29/45 (64.44%), Postives = 36/45 (80.00%), Query Frame = -2 Query: 207 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKC 341 LAVL++YKVD++GK+ RLRKEC CG G FMA H +RHYCG+C Sbjct: 24 LAVLKYYKVDENGKITRLRKECQQPSCGGGVFMAQHANRHYCGRC 68
BLAST of CF834520 vs. ExPASy Swiss-Prot
Match: RS27A_CAEEL (40S ribosomal protein S27a OS=Caenorhabditis elegans GN=ubl-1 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.977e-12 Identity = 28/45 (62.22%), Postives = 36/45 (80.00%), Query Frame = -2 Query: 207 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKC 341 LAVL++YK+D++GK+ RLRKEC CG G FMA H +RHYCG+C Sbjct: 24 LAVLKYYKIDENGKITRLRKECQQPSCGGGVFMAQHANRHYCGRC 68
BLAST of CF834520 vs. ExPASy Swiss-Prot
Match: RS37_YEAST (40S ribosomal protein S31 OS=Saccharomyces cerevisiae GN=UBI3 PE=1 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 2.582e-12 Identity = 32/49 (65.31%), Postives = 36/49 (73.47%), Query Frame = -2 Query: 195 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLPY 341 LAVL +YKVD GKV +LR+EC N CGAG F+ANH DR YCGKC Y Sbjct: 24 LAVLSYYKVDAEGKVTKLRRECSNPTCGAGVFLANHKDRLYCGKCHSVY 72
BLAST of CF834520 vs. ExPASy Swiss-Prot
Match: RUB3_ARATH (NEDD8-like protein RUB3 OS=Arabidopsis thaliana GN=RUB3 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.752e-12 Identity = 31/57 (54.39%), Postives = 43/57 (75.44%), Query Frame = -2 Query: 411 SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 581 +DTI+ +K +I++KEGIPP QR+++ GKQL D T YN+++ S LHLVL LRGG Sbjct: 20 TDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYNLERGSVLHLVLALRGG 76
BLAST of CF834520 vs. ExPASy Swiss-Prot
Match: NEDD8_DICDI (NEDD8 OS=Dictyostelium discoideum GN=nedd8 PE=3 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 9.811e-12 Identity = 31/57 (54.39%), Postives = 43/57 (75.44%), Query Frame = -2 Query: 411 SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 581 +D I +K ++++KEGIPP QQRLIF GKQ+ D + ++Y+I+ S LHLVL LRGG Sbjct: 20 TDKIQRIKERVEEKEGIPPSQQRLIFGGKQMGDDKPASEYSIEGGSVLHLVLALRGG 76
BLAST of CF834520 vs. ExPASy Swiss-Prot
Match: UBL1_SCHPO (Ubiquitin-like protein 1 OS=Schizosaccharomyces pombe GN=ubl1 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.186e-11 Identity = 29/58 (50.00%), Postives = 43/58 (74.14%), Query Frame = -2 Query: 408 SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGA 581 +D + +K ++++KEGIPP QQRLI+AGKQ+ D + Y+++ S LHLVL LRGG+ Sbjct: 20 NDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKNAESYHLEGGSVLHLVLALRGGS 77 The following BLAST results are available for this feature:
BLAST of CF834520 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 121
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834520 ID=CF834520; Name=CF834520; organism=Citrus sinensis; type=EST; length=696bpback to top |