CF834523
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834523 vs. ExPASy Swiss-Prot
Match: INO80_PHANO (Putative DNA helicase INO80 OS=Phaeosphaeria nodorum GN=INO80 PE=3 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 4.065e-22 Identity = 49/100 (49.00%), Postives = 69/100 (69.00%), Query Frame = 2 Query: 2 YKFLLFDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 301 YK+ DG+TK DR V DFQ +FLL+++ GGLG+ LT AD VI D WNP+ D+Q++DRA+R+GQ + V VYRL+T GT+EE+I ++ + K Sbjct: 1440 YKYCRLDGSTKLEDRRDTVADFQSDPTIFVFLLSTRAGGLGINLTSADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLITSGTIEERIRKRALQK 1539
BLAST of CF834523 vs. ExPASy Swiss-Prot
Match: INO80_USTMA (Putative DNA helicase INO80 OS=Ustilago maydis GN=INO80 PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.309e-22 Identity = 51/95 (53.68%), Postives = 68/95 (71.58%), Query Frame = 2 Query: 2 YKFLLFDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYR 286 YK+L DG +K SDR +V D+Q IFLL+++ GGLG+ LT AD VI D WNPS D+Q++DRA+R+GQ K V VYRL+T GT++E+I R Sbjct: 1620 YKYLRLDGASKISDRRDMVTDWQTKPELFIFLLSTRAGGLGINLTAADTVIFYDHDWNPSNDSQAMDRAHRLGQTKQVTVYRLITKGTIDERIVR 1714
BLAST of CF834523 vs. ExPASy Swiss-Prot
Match: INO80_GIBZE (Putative DNA helicase INO80 OS=Gibberella zeae GN=INO80 PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.309e-22 Identity = 51/100 (51.00%), Postives = 70/100 (70.00%), Query Frame = 2 Query: 2 YKFLLFDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 301 YK+ DG+TK DR V+DFQ IFLL+++ GGLG+ LT AD VI D WNP+ D+Q++DRA+R+GQ K V VYRL+T GT+EE+I ++ + K Sbjct: 1667 YKYCRLDGSTKLEDRRDTVHDFQTRPEIFIFLLSTRAGGLGINLTTADTVIFYDSDWNPTIDSQAMDRAHRLGQTKQVTVYRLITRGTIEERIRKRAMQK 1766
BLAST of CF834523 vs. ExPASy Swiss-Prot
Match: RAD26_MOUSE (Putative DNA repair and recombination protein RAD26-like OS=Mus musculus GN=Rad26l PE=2 SV=2) HSP 1 Score: 103.99 bits (258), Expect = 9.055e-22 Identity = 52/111 (46.85%), Postives = 72/111 (64.86%), Query Frame = 2 Query: 20 DGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYF 352 DG+TK+ +R+KIV +F I L+++ GGLGL A+ VI+ DP WNP+ D Q+VDRAYRIGQ +DV V RL++ GTVEE +Y +Q++K L + RYF Sbjct: 553 DGSTKSEERLKIVKEFNSSQDVNICLVSTMAGGLGLNFVGANVVILFDPTWNPANDLQAVDRAYRIGQCRDVKVLRLISLGTVEEIMYLRQVYKQQLHCVVVGSENAKRYF 663
BLAST of CF834523 vs. ExPASy Swiss-Prot
Match: INO80_NEUCR (Putative DNA helicase ino-80 OS=Neurospora crassa GN=ino-80 PE=3 SV=3) HSP 1 Score: 103.99 bits (258), Expect = 9.055e-22 Identity = 51/100 (51.00%), Postives = 69/100 (69.00%), Query Frame = 2 Query: 2 YKFLLFDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 301 YK+ DG+TK DR V DFQ IFLL+++ GGLG+ LT AD VI D WNP+ D+Q++DRA+R+GQ K V VYRL+T GT+EE+I ++ + K Sbjct: 1739 YKYCRLDGSTKLEDRRDTVADFQTRPEIFIFLLSTRAGGLGINLTSADTVIFYDSDWNPTIDSQAMDRAHRLGQTKQVTVYRLITRGTIEERIRKRAMQK 1838
BLAST of CF834523 vs. ExPASy Swiss-Prot
Match: RAD54_YEAST (DNA repair and recombination protein RAD54 OS=Saccharomyces cerevisiae GN=RAD54 PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.183e-21 Identity = 53/127 (41.73%), Postives = 81/127 (63.78%), Query Frame = 2 Query: 2 YKFLLFDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQI-RYFSQQDLREL 376 Y + DGT + R K+V+ F + + IFLL+S+ GG G+ L A+R+I++DP WNP+ D Q++ R +R GQKKD +YR ++ GT+EEKI+++Q K L + KE + R FS +LR+L Sbjct: 697 YSAVRLDGTMSINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILMDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDAKEDVERLFSSDNLRQL 823
BLAST of CF834523 vs. ExPASy Swiss-Prot
Match: RAD54_CHICK (DNA repair and recombination protein RAD54-like (Fragment) OS=Gallus gallus GN=RAD54L PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.183e-21 Identity = 52/130 (40.00%), Postives = 80/130 (61.54%), Query Frame = 2 Query: 2 YKFLLFDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQI-RYFSQQDLRELLSL 385 Y ++ DGT R K+V F IF+L+S+ GG GL L A+R+++ DP WNP+ D Q++ R +R GQKK +YRL++ GT+EEKI+++Q K L + ++ + R+FS +L+EL SL Sbjct: 527 YLYVRLDGTMSIKKRAKVVERFNSPSSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSTGTIEEKIFQRQTHKKALSSCVVDEEQDVERHFSLGELKELFSL 656
BLAST of CF834523 vs. ExPASy Swiss-Prot
Match: INO80_NEOFI (Putative DNA helicase ino80 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=ino80 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.183e-21 Identity = 49/100 (49.00%), Postives = 70/100 (70.00%), Query Frame = 2 Query: 2 YKFLLFDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 301 YK+ DG+TK DR V DFQ+ +FLL+++ GGLG+ LT AD VI D WNP+ D+Q++DRA+R+GQ + V VYRL+T GT+EE+I ++ + K Sbjct: 1459 YKYCRLDGSTKLEDRRDTVADFQQRPEIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLITRGTIEERIRKRALQK 1558
BLAST of CF834523 vs. ExPASy Swiss-Prot
Match: INO80_ASPTN (Putative DNA helicase ino80 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=ino80 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.183e-21 Identity = 49/100 (49.00%), Postives = 70/100 (70.00%), Query Frame = 2 Query: 2 YKFLLFDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 301 YK+ DG+TK DR V DFQ+ +FLL+++ GGLG+ LT AD VI D WNP+ D+Q++DRA+R+GQ + V VYRL+T GT+EE+I ++ + K Sbjct: 1440 YKYCRLDGSTKLEDRRDTVADFQQRPEIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLITRGTIEERIRKRALQK 1539
BLAST of CF834523 vs. ExPASy Swiss-Prot
Match: INO80_ASPOR (Putative DNA helicase ino80 OS=Aspergillus oryzae GN=ino80 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.183e-21 Identity = 49/100 (49.00%), Postives = 70/100 (70.00%), Query Frame = 2 Query: 2 YKFLLFDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 301 YK+ DG+TK DR V DFQ+ +FLL+++ GGLG+ LT AD VI D WNP+ D+Q++DRA+R+GQ + V VYRL+T GT+EE+I ++ + K Sbjct: 1257 YKYCRLDGSTKLEDRRDTVADFQQRPEIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLITRGTIEERIRKRALQK 1356 The following BLAST results are available for this feature:
BLAST of CF834523 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 169
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834523 ID=CF834523; Name=CF834523; organism=Citrus sinensis; type=EST; length=745bpback to top |