CF834523
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834523 vs. ExPASy Swiss-Prot
Match: INO80_ASPNC (Putative DNA helicase ino80 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=ino80 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.183e-21 Identity = 49/100 (49.00%), Postives = 70/100 (70.00%), Query Frame = 2 Query: 2 YKFLLFDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 301 YK+ DG+TK DR V DFQ+ +FLL+++ GGLG+ LT AD VI D WNP+ D+Q++DRA+R+GQ + V VYRL+T GT+EE+I ++ + K Sbjct: 1447 YKYCRLDGSTKLEDRRDTVADFQQRPEIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLITRGTIEERIRKRALQK 1546
BLAST of CF834523 vs. ExPASy Swiss-Prot
Match: INO80_ASPFU (Putative DNA helicase ino80 OS=Aspergillus fumigatus GN=ino80 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.183e-21 Identity = 49/100 (49.00%), Postives = 70/100 (70.00%), Query Frame = 2 Query: 2 YKFLLFDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 301 YK+ DG+TK DR V DFQ+ +FLL+++ GGLG+ LT AD VI D WNP+ D+Q++DRA+R+GQ + V VYRL+T GT+EE+I ++ + K Sbjct: 1459 YKYCRLDGSTKLEDRRDTVADFQQRPEIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLITRGTIEERIRKRALQK 1558
BLAST of CF834523 vs. ExPASy Swiss-Prot
Match: RAD54_MOUSE (DNA repair and recombination protein RAD54-like OS=Mus musculus GN=Rad54l PE=2 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 1.545e-21 Identity = 54/145 (37.24%), Postives = 87/145 (60.00%), Query Frame = 2 Query: 2 YKFLLFDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQI-RYFSQQDLRELLSLPKQGFDVSLTQQQLH 430 Y ++ DGT R K+V F +F+L+S+ GG GL L A+R+++ DP WNP+ D Q++ R +R GQKK +YRL++ GT+EEKI+++Q K L + ++ + R+FS +L+EL +L + +S T +LH Sbjct: 538 YLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKICYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVERHFSLGELKELFTLDEA--SLSDTHDRLH 680
BLAST of CF834523 vs. ExPASy Swiss-Prot
Match: MOT1_YEAST (TATA-binding protein-associated factor MOT1 OS=Saccharomyces cerevisiae GN=MOT1 PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.545e-21 Identity = 63/143 (44.06%), Postives = 81/143 (56.64%), Query Frame = 2 Query: 8 FLLFDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELLSLPKQGFDVSLTQQQLHEE 436 ++ DG+ DR K+V F E LLT++VGGLGL LT AD VI V+ WNP D Q++DRA+RIGQKK V VYR++T GT+EEKI Q FK + T +Q + D +LL L FD Q +EE Sbjct: 1676 YMRLDGSIDPRDRQKVVRKFNEDPSIDCLLLTTKVGGLGLNLTGADTVIFVEHDWNPMNDLQAMDRAHRIGQKKVVNVYRIITKGTLEEKIMGLQKFKMNIASTVV--NQQNSGLASMDTHQLLDL----FDPDNVTSQDNEE 1812
BLAST of CF834523 vs. ExPASy Swiss-Prot
Match: INO80_ASPCL (Putative DNA helicase ino80 OS=Aspergillus clavatus GN=ino80 PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.545e-21 Identity = 49/100 (49.00%), Postives = 70/100 (70.00%), Query Frame = 2 Query: 2 YKFLLFDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 301 YK+ DG+TK DR V DFQ+ +FLL+++ GGLG+ LT AD VI D WNP+ D+Q++DRA+R+GQ + V VYRL+T GT+EE+I ++ + K Sbjct: 1460 YKYCRLDGSTKLEDRRDTVADFQQRPDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLITRGTIEERIRKRALQK 1559
BLAST of CF834523 vs. ExPASy Swiss-Prot
Match: RAD54_HUMAN (DNA repair and recombination protein RAD54-like OS=Homo sapiens GN=RAD54L PE=1 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 2.017e-21 Identity = 54/145 (37.24%), Postives = 86/145 (59.31%), Query Frame = 2 Query: 2 YKFLLFDGTTKASDRVKIVNDFQEGDVAP-IFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQI-RYFSQQDLRELLSLPKQGFDVSLTQQQLH 430 Y ++ DGT R K+V F +F+L+S+ GG GL L A+R+++ DP WNP+ D Q++ R +R GQKK +YRL++ GT+EEKI+++Q K L + ++ + R+FS +L+EL L + +S T +LH Sbjct: 538 YLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVERHFSLGELKELFILDEA--SLSDTHDRLH 680
BLAST of CF834523 vs. ExPASy Swiss-Prot
Match: RAD26_HUMAN (Putative DNA repair and recombination protein RAD26-like OS=Homo sapiens GN=RAD26L PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.017e-21 Identity = 51/111 (45.95%), Postives = 72/111 (64.86%), Query Frame = 2 Query: 20 DGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYF 352 DG+TK+ +R+KIV +F I L+++ GGLGL A+ V++ DP WNP+ D Q++DRAYRIGQ +DV V RL++ GTVEE +Y +QI+K L + RYF Sbjct: 566 DGSTKSEERLKIVKEFNSTQDVNICLVSTMAGGLGLNFVGANVVVLFDPTWNPANDLQAIDRAYRIGQCRDVKVLRLISLGTVEEIMYLRQIYKQQLHCVVVGSENAKRYF 676
BLAST of CF834523 vs. ExPASy Swiss-Prot
Match: INO80_MAGGR (Putative DNA helicase INO80 OS=Magnaporthe grisea GN=INO80 PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.441e-21 Identity = 48/100 (48.00%), Postives = 70/100 (70.00%), Query Frame = 2 Query: 2 YKFLLFDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 301 +K+ DG+TK DR V+DFQ +FLL+++ GGLG+ LT AD VI D WNP+ D+Q++DRA+R+GQ + V VYRL+T GT+EE+I ++ + K Sbjct: 1700 WKYCRLDGSTKFEDRRDTVHDFQTNPSIFVFLLSTRAGGLGINLTSADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLITRGTIEERIRKRAMQK 1799
BLAST of CF834523 vs. ExPASy Swiss-Prot
Match: INO80_EMENI (Putative DNA helicase ino80 OS=Emericella nidulans GN=ino80 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.666e-21 Identity = 48/100 (48.00%), Postives = 69/100 (69.00%), Query Frame = 2 Query: 2 YKFLLFDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFK 301 YK+ DG+TK DR V DFQ+ +FLL+++ GGLG+ LT AD VI D WNP+ D+Q++DRA+R+GQ + V VYRL+T T+EE+I ++ + K Sbjct: 1362 YKYCRLDGSTKLEDRRDTVADFQQRPDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLITRSTIEERIRKRALQK 1461
BLAST of CF834523 vs. ExPASy Swiss-Prot
Match: INO80_SCHPO (Putative DNA helicase ino80 OS=Schizosaccharomyces pombe GN=ino80 PE=1 SV=4) HSP 1 Score: 100.523 bits (249), Expect = 1.001e-20 Identity = 48/93 (51.61%), Postives = 67/93 (72.04%), Query Frame = 2 Query: 2 YKFLLFDGTTKASDRVKIVNDFQEGDVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKI 280 YK+L DG++K S R +V ++Q +FLL+++ GGLG+ LT AD VI D WNPS D+Q++DRA+RIGQ+K V VYR +T GT+EE+I Sbjct: 1470 YKYLRLDGSSKISQRRDMVTEWQTRPELFVFLLSTRAGGLGINLTAADTVIFYDSDWNPSIDSQAMDRAHRIGQQKQVTVYRFITRGTIEERI 1562 The following BLAST results are available for this feature:
BLAST of CF834523 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 169
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF834523 ID=CF834523; Name=CF834523; organism=Citrus sinensis; type=EST; length=745bpback to top |