CF834539

Overview
NameCF834539
Unique NameCF834539
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length425
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1841 contig Csv1_Contig1841:132..555. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834539 vs. ExPASy Swiss-Prot
Match: TLP1_CASSA (Thaumatin-like protein 1 OS=Castanea sativa GN=TL1 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.445e-17
Identity = 48/131 (36.64%), Postives = 66/131 (50.38%), Query Frame = 1
Query:   34 RPSRPNAGHPILERGGFYLHTLTHRSFPAPAQHWTGRIWAITGCTYAHGKFSCVTGDCGH-RLECNGLGGATPATLAQITLHHGHNDLSSYRVSLVDSFNVPMTVTPHEGKGVCPVVGCRADLLSTCPQNL 423
            +P  PN G  +  +    L         AP   W GR WA T CT   GKF+C T DC   ++ CNG G   PA+L +I +   +  +  Y VSLVD +N+P++V    G G C    CRA++ + CP  L
Sbjct:   45 KPQLPNTGFVLASKASLTL------GVQAP---WKGRFWARTRCTTNSGKFTCETADCSTGQVACNGNGAIPPASLVEINIA-ANRGMDFYDVSLVDGYNLPVSVATRGGTGDCKATSCRANVNAVCPAEL 165          
BLAST of CF834539 vs. ExPASy Swiss-Prot
Match: ZEAM_MAIZE (Zeamatin OS=Zea mays GN=Zlp PE=1 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 3.194e-17
Identity = 57/136 (41.91%), Postives = 69/136 (50.74%), Query Frame = 1
Query:   19 PFTSGRPSRPNAGHPILERGGFYLHTLTHRSFPAPAQHWTGRIWAITGCTY-AHGKFSCVTGDCGHRLECNGLGGATPATLAQITLHHGHNDLSSYRVSLVDSFNVPMTVTPHEGKGVCPVVGCRADLLSTCPQNL 423
            PFT    S P  G   L RG  +  T       APA     RIWA TGC + A G+ SC TGDCG  L+C G G A P TLA+  L    N+L  + +SL+D FNVPM+  P  G G      C  D+ + CP  L
Sbjct:   31 PFTVWAASVPVGGGRQLNRGESWRIT-------APAGTTAARIWARTGCKFDASGRGSCRTGDCGGVLQCTGYGRA-PNTLAEYALKQ-FNNLDFFDISLIDGFNVPMSFLPDGGSGCSRGPRCAVDVNARCPAEL 157          
BLAST of CF834539 vs. ExPASy Swiss-Prot
Match: PRR3_JUNAS (Pathogenesis-related protein OS=Juniperus ashei PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.070e-16
Identity = 44/97 (45.36%), Postives = 57/97 (58.76%), Query Frame = 1
Query:  136 TGRIWAITGCTY-AHGKFSCVTGDCGHRLECNGLGGATPATLAQITLHHGHNDLSSYRVSLVDSFNVPMTVTPHEGKGVCPVVGCRADLLSTCPQNL 423
            + R W  TGCT+ A GK SC TGDCG +L C  + GA PATLA+ T     +D   Y VSLVD FN+P+ + P   +  C    C+AD+ + CP  L
Sbjct:   67 SARFWGRTGCTFDASGKGSCQTGDCGGQLSCT-VSGAVPATLAEYT----QSDQDYYDVSLVDGFNIPLAINPTNAQ--CTAPACKADINAVCPSEL 156          
BLAST of CF834539 vs. ExPASy Swiss-Prot
Match: IAAT_MAIZE (Alpha-amylase/trypsin inhibitor OS=Zea mays PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.027e-15
Identity = 54/136 (39.71%), Postives = 68/136 (50.00%), Query Frame = 1
Query:   19 PFTSGRPSRPNAGHPILERGGFYLHTLTHRSFPAPAQHWTGRIWAITGCTY-AHGKFSCVTGDCGHRLECNGLGGATPATLAQITLHHGHNDLSSYRVSLVDSFNVPMTVTPHEGKGVCPVVGCRADLLSTCPQNL 423
            PFT    S P  G   L RG  +  T       APA     RIWA TGC + A G+ SC TGDCG  ++C G G A P TLA+  L    N+L  + +S++D FNVP +  P  G G      C  D+ + CP  L
Sbjct:   10 PFTVWAASVPVGGGRQLNRGESWRIT-------APAGTTAARIWARTGCQFDASGRGSCRTGDCGGVVQCTGYGRA-PNTLAEYALKQ-FNNLDFFDISILDGFNVPYSFLPDGGSGCSRGPRCAVDVNARCPAEL 136          
BLAST of CF834539 vs. ExPASy Swiss-Prot
Match: P21_SOYBN (Protein P21 OS=Glycine max PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.659e-15
Identity = 48/117 (41.03%), Postives = 61/117 (52.14%), Query Frame = 1
Query:   76 GGFYLHTLTHRSFPAPAQHWTGRIWAITGCTY-AHGKFSCVTGDCGHRLECNGLGGATPATLAQITLHHGHNDLSSYRVSLVDSFNVPMTVTPHEGKGVCPVVGCRADLLSTCPQNL 423
            GG  L+     S   PA     R+WA TGC +   G+  C TGDCG  L+C   G A P TLA+  L+ G N+L  + +SLVD FNVPM  +P    G    + C AD+   CP  L
Sbjct:   22 GGVQLNPGQSWSVDVPAGTKGARVWARTGCNFDGSGRGGCQTGDCGGVLDCKAYG-APPNTLAEYGLN-GFNNLDFFDISLVDGFNVPMDFSP-TSNGCTRGISCTADINGQCPSEL 135          
BLAST of CF834539 vs. ExPASy Swiss-Prot
Match: OS81_SOLCO (Osmotin-like protein OSML81 OS=Solanum commersonii PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 8.698e-15
Identity = 52/137 (37.96%), Postives = 68/137 (49.64%), Query Frame = 1
Query:   19 PFTSGRPSRPNAGHPILERGGFYLHTLTHRSFPAPAQHWTGRIWAITGCTY-AHGKFSCVTGDCGHRLECNGLGGATPATLAQITLHHGHNDLSSYRVSLVDSFNVPMTVTPHE-GKGVCPVVGCRADLLSTCPQNL 423
            P+T    S P  G   L +G  ++         AP      RIW  TGC + A G+ SC TGDCG  L+C G  G  P TLA+  L    N L  + +SLVD FN+PMT  P +   G C  + C A++   CP+ L
Sbjct:   31 PYTVWAASTPIGGGRRLNKGQTWV-------INAPRGTKMARIWGRTGCNFNAAGRGSCQTGDCGGVLQCTG-WGKPPNTLAEYALDQFSN-LDFWDISLVDGFNIPMTFAPTKPSAGKCHAIHCTANINGECPRAL 158          
BLAST of CF834539 vs. ExPASy Swiss-Prot
Match: NP24_SOLLC (Protein NP24 OS=Solanum lycopersicum PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 1.136e-14
Identity = 52/137 (37.96%), Postives = 68/137 (49.64%), Query Frame = 1
Query:   19 PFTSGRPSRPNAGHPILERGGFYLHTLTHRSFPAPAQHWTGRIWAITGCTY-AHGKFSCVTGDCGHRLECNGLGGATPATLAQITLHHGHNDLSSYRVSLVDSFNVPMTVTPHE-GKGVCPVVGCRADLLSTCPQNL 423
            P+T    S P  G   L RG  ++         AP      RIW  TGC + A G+ +C TGDCG  L+C G  G  P TLA+  L    N L  + +SLVD FN+PMT  P +   G C  + C A++   CP+ L
Sbjct:   31 PYTVWAASTPIGGGRRLNRGQTWV-------INAPRGTKMARIWGRTGCNFNAAGRGTCQTGDCGGVLQCTG-WGKPPNTLAEYALDQFSN-LDFWDISLVDGFNIPMTFAPTKPSGGKCHAIHCTANINGECPRAL 158          
BLAST of CF834539 vs. ExPASy Swiss-Prot
Match: TPM1_SOLLC (Osmotin-like protein TPM-1 (Fragment) OS=Solanum lycopersicum GN=TPM-1 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.531e-14
Identity = 51/137 (37.23%), Postives = 67/137 (48.91%), Query Frame = 1
Query:   19 PFTSGRPSRPNAGHPILERGGFYLHTLTHRSFPAPAQHWTGRIWAITGCTY-AHGKFSCVTGDCGHRLECNGLGGATPATLAQITLHHGHNDLSSYRVSLVDSFNVPMTVTP-HEGKGVCPVVGCRADLLSTCPQNL 423
            P+T    S P  G   L+RG  ++         AP      RIW  T C +   G+ SC TGDCG  L+C G  G  P TLA+  L    N L  + +SLVD FN+PMT  P +   G C  + C A++   CP +L
Sbjct:   23 PYTVWAASTPIGGGRRLDRGQTWV-------INAPRGTKMARIWGRTNCNFDGDGRGSCQTGDCGGVLQCTG-WGKPPNTLAEYALDQFSN-LDFWDISLVDGFNIPMTFAPTNPSGGKCHAIHCTANINGECPGSL 150          
BLAST of CF834539 vs. ExPASy Swiss-Prot
Match: OS13_SOLCO (Osmotin-like protein OSML13 OS=Solanum commersonii PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.305e-14
Identity = 51/137 (37.23%), Postives = 67/137 (48.91%), Query Frame = 1
Query:   19 PFTSGRPSRPNAGHPILERGGFYLHTLTHRSFPAPAQHWTGRIWAITGCTY-AHGKFSCVTGDCGHRLECNGLGGATPATLAQITLHHGHNDLSSYRVSLVDSFNVPMTVTP-HEGKGVCPVVGCRADLLSTCPQNL 423
            P+T    S P  G   L+RG  ++         AP      RIW  T C +   G+ SC TGDCG  L+C G  G  P TLA+  L    N L  + +SLVD FN+PMT  P +   G C  + C A++   CP +L
Sbjct:   31 PYTVWAASTPIGGGRRLDRGQTWV-------INAPRGTKMARIWGRTNCNFDGAGRGSCQTGDCGGVLQCTG-WGKPPNTLAEYALDQFSN-LDFWDISLVDGFNIPMTFAPTNPSGGKCHAIHCTANINGECPGSL 158          
BLAST of CF834539 vs. ExPASy Swiss-Prot
Match: OSMO_TOBAC (Osmotin OS=Nicotiana tabacum GN=AP24 PE=1 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 4.317e-14
Identity = 49/137 (35.77%), Postives = 68/137 (49.64%), Query Frame = 1
Query:   19 PFTSGRPSRPNAGHPILERGGFYLHTLTHRSFPAPAQHWTGRIWAITGCTY-AHGKFSCVTGDCGHRLECNGLGGATPATLAQITLHHGHNDLSSYRVSLVDSFNVPMTVTP-HEGKGVCPVVGCRADLLSTCPQNL 423
            P+T    S P  G   L+RG  ++         AP      R+W  T C + A G+ +C TGDCG  L+C G  G  P TLA+  L    + L  + +SLVD FN+PMT  P +   G C  + C A++   CP+ L
Sbjct:   31 PYTVWAASTPIGGGRRLDRGQTWV-------INAPRGTKMARVWGRTNCNFNAAGRGTCQTGDCGGVLQCTG-WGKPPNTLAEYALDQ-FSGLDFWDISLVDGFNIPMTFAPTNPSGGKCHAIHCTANINGECPREL 158          
The following BLAST results are available for this feature:
BLAST of CF834539 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
TLP1_CASSA2.445e-1736.64Thaumatin-like protein 1 OS=Castanea sativa GN=TL1... [more]
ZEAM_MAIZE3.194e-1741.91Zeamatin OS=Zea mays GN=Zlp PE=1 SV=2[more]
PRR3_JUNAS2.070e-1645.36Pathogenesis-related protein OS=Juniperus ashei PE... [more]
IAAT_MAIZE1.027e-1539.71Alpha-amylase/trypsin inhibitor OS=Zea mays PE=1 S... [more]
P21_SOYBN6.659e-1541.03Protein P21 OS=Glycine max PE=1 SV=1[more]
OS81_SOLCO8.698e-1537.96Osmotin-like protein OSML81 OS=Solanum commersonii... [more]
NP24_SOLLC1.136e-1437.96Protein NP24 OS=Solanum lycopersicum PE=1 SV=2[more]
TPM1_SOLLC2.531e-1437.23Osmotin-like protein TPM-1 (Fragment) OS=Solanum l... [more]
OS13_SOLCO3.305e-1437.23Osmotin-like protein OSML13 OS=Solanum commersonii... [more]
OSMO_TOBAC4.317e-1435.77Osmotin OS=Nicotiana tabacum GN=AP24 PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05L08_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05L08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834539 ID=CF834539; Name=CF834539; organism=Citrus sinensis; type=EST; length=425bp
CCCTAGTCAACAACTGCCCCCTTCACGTCTGGCCGGCCATCCAGACCCAA
CGCCGGCCACCCAATCCTCGAACGTGGCGGTTTCTATCTCCATACCCTCA
CCCACCGCTCCTTCCCCGCTCCGGCCCAACACTGGACGGGCCGGATCTGG
GCCATAACCGGCTGCACCTACGCCCACGGCAAATTCTCCTGCGTCACGGG
CGACTGCGGCCACCGCTTGGAATGCAACGGACTCGGCGGGGCGACTCCAG
CCACCCTGGCCCAGATCACCCTCCACCACGGCCACAACGACCTCTCCTCC
TACCGCGTCTCTCTAGTCGACAGCTTCAACGTCCCCATGACTGTCACCCC
GCACGAGGGCAAGGGCGTCTGTCCGGTAGTGGGTTGTCGCGCTGACCTGC
TATCCACGTGTCCTCAGAACCTGCA
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