CF834539
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834539 vs. ExPASy Swiss-Prot
Match: RST2_AVESA (Thaumatin-like pathogenesis-related protein 2 OS=Avena sativa GN=RASTL-2 PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 1.953e-11 Identity = 39/96 (40.62%), Postives = 54/96 (56.25%), Query Frame = 1 Query: 52 AGHPILERGGFYLHTLTHRSFPAPAQHWTGRIWAITGCTYAHGKFSCVTGDCGHRLECNGLGGATPATLAQITLHHGHNDLSSYRVSLVDSFNVPM 339 AG P+ GGF L++ + PA GRIW TGC++ +G+ SC TGDC L C G PATLA+ T+ G D Y +S++D +N+ M Sbjct: 37 AGIPV--GGGFQLNSKQSSNINVPAGTSAGRIWGRTGCSFNNGRGSCATGDCAGALSCTLSG--QPATLAEYTI-GGSQDF--YDISVIDGYNLAM 125 HSP 2 Score: 21.9422 bits (45), Expect = 1.953e-11 Identity = 7/12 (58.33%), Postives = 8/12 (66.67%), Query Frame = 3 Query: 3 LVNNCPLHVWPA 38 + NNC VWPA Sbjct: 26 ITNNCGFTVWPA 37
BLAST of CF834539 vs. ExPASy Swiss-Prot
Match: PRR2_TOBAC (Pathogenesis-related protein R minor form OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.467e-11 Identity = 38/95 (40.00%), Postives = 49/95 (51.58%), Query Frame = 1 Query: 142 RIWAITGCTY-AHGKFSCVTGDCGHRLECNGLGGATPATLAQITLHHGHNDLSSYRVSLVDSFNVPMTVTPHEGKGVCPVVGCRADLLSTCPQNL 423 RIW T C + G+ +C TGDC LEC G G P TLA+ L+ + D +SLVD FN+PM +P G C + C A + CP L Sbjct: 68 RIWGRTNCNFDGSGRGNCETGDCNGMLECQGY-GKPPNTLAEFALNQPNQDFVD--ISLVDGFNIPMEFSPTNGG--CRNLRCTAPINEQCPAQL 157 The following BLAST results are available for this feature:
BLAST of CF834539 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF834539 ID=CF834539; Name=CF834539; organism=Citrus sinensis; type=EST; length=425bpback to top |