CF834555
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834555 vs. ExPASy Swiss-Prot
Match: ISCA1_MOUSE (Iron-sulfur cluster assembly 1 homolog, mitochondrial OS=Mus musculus GN=Isca1 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 7.442e-26 Identity = 60/122 (49.18%), Postives = 84/122 (68.85%), Query Frame = 3 Query: 87 ASFLAQAAEKIGPAVRRQAVTLTDSAASRVRHLLQQR-QRPYLKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 449 A+ A + K+ P R A+TLT SA ++++ LL+ + + LK+GV+ RGCNGLSY+L Y + DE V GV++ I+ KA + ++GT+MD+V+DKL SEFVF NPN KG CGCGESF Sbjct: 8 ATVRAVSKRKLQPT--RAALTLTPSAVNKIKQLLKDKPEHVGLKVGVRTRGCNGLSYSLEYTKTKGDSDEEVIQDGVRVFIEKKAQLTLLGTEMDYVEDKLSSEFVFNNPNIKGTCGCGESF 127
BLAST of CF834555 vs. ExPASy Swiss-Prot
Match: ISCA1_DANRE (Iron-sulfur cluster assembly 1 homolog, mitochondrial OS=Danio rerio GN=isca1 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.828e-25 Identity = 57/106 (53.77%), Postives = 76/106 (71.70%), Query Frame = 3 Query: 135 RQAVTLTDSAASRVRHLLQQRQRPY-LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 449 R A+TLT SA ++V+ LL + LK+GV+ RGCNGL+YTL+Y + + DE V GV++ I+ KA + ++GT+MDFV+ KL SEFVF NPN KG CGCGESF Sbjct: 22 RAALTLTPSAVNKVKQLLDNKPEYIGLKVGVRTRGCNGLTYTLDYTKNKEQSDEEVLQDGVRVFIEKKAQLTLLGTEMDFVETKLSSEFVFNNPNIKGTCGCGESF 127
BLAST of CF834555 vs. ExPASy Swiss-Prot
Match: ISCA_ENT38 (Iron-binding protein iscA OS=Enterobacter sp. (strain 638) GN=iscA PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.965e-24 Identity = 53/104 (50.96%), Postives = 74/104 (71.15%), Query Frame = 3 Query: 141 AVTLTDSAASRVRHLLQQRQRPY-LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 449 ++TL+DSAA+RV L+ R + Y L+LGV+ GC+G++Y L + DE A D + EDKGVK++ID K+L + GT++DFV + L F F NPN K +CGCGESF Sbjct: 2 SITLSDSAAARVSSFLENRGKGYGLRLGVRTSGCSGMAYVLEFVDEPATDDTVFEDKGVKVVIDGKSLQFLDGTQLDFVKEGLNEGFKFTNPNVKDECGCGESF 105
BLAST of CF834555 vs. ExPASy Swiss-Prot
Match: ISCA_KLEP3 (Iron-binding protein iscA OS=Klebsiella pneumoniae (strain 342) GN=iscA PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.457e-23 Identity = 52/104 (50.00%), Postives = 73/104 (70.19%), Query Frame = 3 Query: 141 AVTLTDSAASRVRHLLQQRQRPY-LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 449 ++TL+DSAA+RV L R + + L+LGV+ GC+G++Y L + DE A D + EDKGVK++ID K+L + GT++DFV + L F F NPN K +CGCGESF Sbjct: 2 SITLSDSAAARVNSFLANRGKGFGLRLGVRTSGCSGMAYVLEFVDEPAAEDTVFEDKGVKVVIDGKSLQFLDGTQLDFVKEGLNEGFKFTNPNVKDECGCGESF 105
BLAST of CF834555 vs. ExPASy Swiss-Prot
Match: ISCA_KLEP7 (Iron-binding protein iscA OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=iscA PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.515e-23 Identity = 52/104 (50.00%), Postives = 73/104 (70.19%), Query Frame = 3 Query: 141 AVTLTDSAASRVRHLLQQRQRPY-LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 449 ++TL+DSAA+RV L R + + L+LGV+ GC+G++Y L + DE A D + EDKGVK++ID K+L + GT++DFV + L F F NPN K +CGCGESF Sbjct: 2 SITLSDSAAARVNAFLANRGKGFGLRLGVRTSGCSGMAYVLEFVDEPAAEDTVFEDKGVKVVIDGKSLQFLDGTQLDFVKEGLNEGFKFTNPNVKDECGCGESF 105
BLAST of CF834555 vs. ExPASy Swiss-Prot
Match: ISCA_SALTY (Iron-binding protein iscA OS=Salmonella typhimurium GN=iscA PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.241e-22 Identity = 50/104 (48.08%), Postives = 72/104 (69.23%), Query Frame = 3 Query: 141 AVTLTDSAASRVRHLLQQRQRPY-LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 449 ++TL+DSAA+RV L R + + L+LGV+ GC+G++Y L + DE D + EDKGVK+++D K+L + GT++DFV + L F F NPN K +CGCGESF Sbjct: 2 SITLSDSAAARVNTFLANRGKGFGLRLGVRTSGCSGMAYVLEFVDEPTAEDTVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLNEGFKFSNPNVKDECGCGESF 105
BLAST of CF834555 vs. ExPASy Swiss-Prot
Match: ISCA_SALTI (Iron-binding protein iscA OS=Salmonella typhi GN=iscA PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.241e-22 Identity = 50/104 (48.08%), Postives = 72/104 (69.23%), Query Frame = 3 Query: 141 AVTLTDSAASRVRHLLQQRQRPY-LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 449 ++TL+DSAA+RV L R + + L+LGV+ GC+G++Y L + DE D + EDKGVK+++D K+L + GT++DFV + L F F NPN K +CGCGESF Sbjct: 2 SITLSDSAAARVNTFLANRGKGFGLRLGVRTSGCSGMAYVLEFVDEPTAEDTVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLNEGFKFSNPNVKDECGCGESF 105
BLAST of CF834555 vs. ExPASy Swiss-Prot
Match: ISCA_SALSV (Iron-binding protein iscA OS=Salmonella schwarzengrund (strain CVM19633) GN=iscA PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.241e-22 Identity = 50/104 (48.08%), Postives = 72/104 (69.23%), Query Frame = 3 Query: 141 AVTLTDSAASRVRHLLQQRQRPY-LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 449 ++TL+DSAA+RV L R + + L+LGV+ GC+G++Y L + DE D + EDKGVK+++D K+L + GT++DFV + L F F NPN K +CGCGESF Sbjct: 2 SITLSDSAAARVNTFLANRGKGFGLRLGVRTSGCSGMAYVLEFVDEPTAEDTVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLNEGFKFSNPNVKDECGCGESF 105
BLAST of CF834555 vs. ExPASy Swiss-Prot
Match: ISCA_SALPK (Iron-binding protein iscA OS=Salmonella paratyphi A (strain AKU_12601) GN=iscA PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.241e-22 Identity = 50/104 (48.08%), Postives = 72/104 (69.23%), Query Frame = 3 Query: 141 AVTLTDSAASRVRHLLQQRQRPY-LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 449 ++TL+DSAA+RV L R + + L+LGV+ GC+G++Y L + DE D + EDKGVK+++D K+L + GT++DFV + L F F NPN K +CGCGESF Sbjct: 2 SITLSDSAAARVNTFLANRGKGFGLRLGVRTSGCSGMAYVLEFVDEPTAEDTVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLNEGFKFSNPNVKDECGCGESF 105
BLAST of CF834555 vs. ExPASy Swiss-Prot
Match: ISCA_SALPC (Iron-binding protein iscA OS=Salmonella paratyphi C (strain RKS4594) GN=iscA PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.241e-22 Identity = 50/104 (48.08%), Postives = 72/104 (69.23%), Query Frame = 3 Query: 141 AVTLTDSAASRVRHLLQQRQRPY-LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 449 ++TL+DSAA+RV L R + + L+LGV+ GC+G++Y L + DE D + EDKGVK+++D K+L + GT++DFV + L F F NPN K +CGCGESF Sbjct: 2 SITLSDSAAARVNTFLANRGKGFGLRLGVRTSGCSGMAYVLEFVDEPTAEDTVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLNEGFKFSNPNVKDECGCGESF 105 The following BLAST results are available for this feature:
BLAST of CF834555 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 330
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834555 ID=CF834555; Name=CF834555; organism=Citrus sinensis; type=EST; length=723bpback to top |