CF834589
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834589 vs. ExPASy Swiss-Prot
Match: YON8_SCHPO (Transmembrane 9 superfamily protein C1105.08 OS=Schizosaccharomyces pombe GN=SPBC1105.08 PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 2.165e-35 Identity = 70/178 (39.33%), Postives = 100/178 (56.18%), Query Frame = -1 Query: 274 YVGSLVGFKKPAIEDPVKTNKIPRQIPEQAWYMNPIFSILIGGILPFGAVFIELFFILTSIWLNQXXXXXXXXXXXXXXXXVTCAEITIVLCYFQLCSEDYQWWWRSYLTSGSSXXXXXXXXXXXXXTKLEITKLVSGILYFGYMLIASYAFFVLTGTIGFYACFWFTRLIYSSVKID 807 +VGSL+GF+ PV+TN+IPRQIP + +++ S +IGG +PF + IELF IL S+W + TC ++I+ YFQLCSE+Y WWWRS++T G K+ + L + +LYFGY L+ S F L G++GF+ F F IY+S+KID Sbjct: 452 FVGSLIGFRSREFVPPVRTNQIPRQIPSHSIWLSSFPSAIIGGSIPFLVILIELFSILDSLWFHPLYFMFGFSFFCFGILVTTCIMVSIITVYFQLCSENYNWWWRSFITPGFCGIYVFIFSVFYWFFKISSSSLATAVLYFGYSLLISVLVFFLCGSVGFFGAFLFVNKIYASIKID 629
BLAST of CF834589 vs. ExPASy Swiss-Prot
Match: TM9S1_PONAB (Transmembrane 9 superfamily member 1 OS=Pongo abelii GN=TM9SF1 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.834e-27 Identity = 59/178 (33.15%), Postives = 92/178 (51.69%), Query Frame = -1 Query: 274 VGSLVGFKKPAIED-PVKTNKIPRQIPEQAWYMNPIFSILIGGILPFGAVFIELFFILTSIWLNQXXXXXXXXXXXXXXXXVTCAEITIVLCYFQLCSEDYQWWWRSYLTSGSSXXXXXXXXXXXXXTKLEITKLVSGILYFGYMLIASYAFFVLTGTIGFYACFWFTRLIYSSVKID 804 +G + G + D P +T I R+IP Q WY + + + +GG LPF A+ +EL++I ++W + A I+I L YFQL EDY+WWWRS L+ GS+ + ++ V + +FGY L+ Y FF++ GTI F++ F R IY ++K+D Sbjct: 429 IGGIFGKNNASPFDAPCRTKNIAREIPPQPWYKSTVIHMTVGGFLPFSAISVELYYIFATVWGREQYTLYGILFFVFAILLSVGACISIALTYFQLSGEDYRWWWRSVLSVGSTGLFIFLYSVFYYARRSNMSGAVQTVEFFGYSLLTGYVFFLMLGTISFFSSLKFIRYIYVNLKMD 606
BLAST of CF834589 vs. ExPASy Swiss-Prot
Match: TM9S1_MOUSE (Transmembrane 9 superfamily member 1 OS=Mus musculus GN=Tm9sf1 PE=2 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 4.834e-27 Identity = 59/178 (33.15%), Postives = 92/178 (51.69%), Query Frame = -1 Query: 274 VGSLVGFKKPAIED-PVKTNKIPRQIPEQAWYMNPIFSILIGGILPFGAVFIELFFILTSIWLNQXXXXXXXXXXXXXXXXVTCAEITIVLCYFQLCSEDYQWWWRSYLTSGSSXXXXXXXXXXXXXTKLEITKLVSGILYFGYMLIASYAFFVLTGTIGFYACFWFTRLIYSSVKID 804 +G + G + D P +T I R+IP Q WY + + + +GG LPF A+ +EL++I ++W + A I+I L YFQL EDY+WWWRS L+ GS+ + ++ V + +FGY L+ Y FF++ GTI F++ F R IY ++K+D Sbjct: 429 IGGIFGKNNASPFDAPCRTKNIAREIPPQPWYKSTVIHMTVGGFLPFSAISVELYYIFATVWGREQYTLYGILFFVFAILLSVGACISIALTYFQLSGEDYRWWWRSVLSVGSTGLFIFLYSVFYYARRSNMSGAVQTVEFFGYSLLTGYVFFLMLGTISFFSSLKFIRYIYVNLKMD 606
BLAST of CF834589 vs. ExPASy Swiss-Prot
Match: TM9S1_HUMAN (Transmembrane 9 superfamily member 1 OS=Homo sapiens GN=TM9SF1 PE=2 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 4.834e-27 Identity = 59/178 (33.15%), Postives = 92/178 (51.69%), Query Frame = -1 Query: 274 VGSLVGFKKPAIED-PVKTNKIPRQIPEQAWYMNPIFSILIGGILPFGAVFIELFFILTSIWLNQXXXXXXXXXXXXXXXXVTCAEITIVLCYFQLCSEDYQWWWRSYLTSGSSXXXXXXXXXXXXXTKLEITKLVSGILYFGYMLIASYAFFVLTGTIGFYACFWFTRLIYSSVKID 804 +G + G + D P +T I R+IP Q WY + + + +GG LPF A+ +EL++I ++W + A I+I L YFQL EDY+WWWRS L+ GS+ + ++ V + +FGY L+ Y FF++ GTI F++ F R IY ++K+D Sbjct: 429 IGGIFGKNNASPFDAPCRTKNIAREIPPQPWYKSTVIHMTVGGFLPFSAISVELYYIFATVWGREQYTLYGILFFVFAILLSVGACISIALTYFQLSGEDYRWWWRSVLSVGSTGLFIFLYSVFYYARRSNMSGAVQTVEFFGYSLLTGYVFFLMLGTISFFSSLKFIRYIYVNLKMD 606
BLAST of CF834589 vs. ExPASy Swiss-Prot
Match: TM9S1_BOVIN (Transmembrane 9 superfamily member 1 OS=Bos taurus GN=TM9SF1 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 8.245e-27 Identity = 59/178 (33.15%), Postives = 92/178 (51.69%), Query Frame = -1 Query: 274 VGSLVGFKKPAIED-PVKTNKIPRQIPEQAWYMNPIFSILIGGILPFGAVFIELFFILTSIWLNQXXXXXXXXXXXXXXXXVTCAEITIVLCYFQLCSEDYQWWWRSYLTSGSSXXXXXXXXXXXXXTKLEITKLVSGILYFGYMLIASYAFFVLTGTIGFYACFWFTRLIYSSVKID 804 +G + G + D P +T I R+IP Q WY + + + +GG LPF A+ +EL++I ++W + A I+I L YFQL EDY+WWWRS L+ GS+ + ++ V + +FGY L+ Y FF++ GTI F++ F R IY ++K+D Sbjct: 429 IGGIFGKNNASPFDAPCRTKNIAREIPPQPWYKSTLVHMTVGGFLPFSAISVELYYIFATVWGREQYTLYGILFFVFAILLSVGACISIALTYFQLSGEDYRWWWRSVLSVGSTGLFIFLYSVFYYARRSNMSGTVQTVEFFGYSLLTGYVFFLMLGTISFFSSLKFIRYIYVNLKMD 606
BLAST of CF834589 vs. ExPASy Swiss-Prot
Match: TMN2_YEAST (Transmembrane 9 superfamily member 2 OS=Saccharomyces cerevisiae GN=TMN2 PE=1 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.406e-26 Identity = 62/179 (34.64%), Postives = 101/179 (56.42%), Query Frame = -1 Query: 274 YVGSLVGFKKPAIED-PVKTNKIPRQIPEQAWYMNPIFSILIGGILPFGAVFIELFFILTSIWLNQXXXXXXXXXXXXXXXXVTCAEITIVLCYFQLCSEDYQWWWRSYLTSGSSXXXXXXXXXXXXXTKLEITKLVSGILYFGYMLIASYAFFVLTGTIGFYACFWFTRLIYSSVKID 807 + GS+V K+ ++ P KTN+I RQIP Q WY+ + LI GI FG++ +EL+FI +S+W N+ +T + +TI++ Y+ LC E++ W WRS++ G TK ++ +++ +LY GY LI S V+TG IGF++ +F R IYS++K++ Sbjct: 495 FAGSIVAHKQCNWDEHPTKTNQIARQIPYQPWYLRTAQATLIAGIFSFGSIAVELYFIYSSLWFNKIFYMFGFLLFSFLLLTLTTSLVTILITYYSLCLENWLWQWRSFIIGGLG-CSIYTFIHSILFTKFKLGGVITVVLYLGYSLIISALCCVVTGAIGFFSSMFFIRKIYSAIKVE 672
BLAST of CF834589 vs. ExPASy Swiss-Prot
Match: TMN1_YEAST (Transmembrane 9 superfamily member 1 OS=Saccharomyces cerevisiae GN=EMP70 PE=1 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 1.406e-26 Identity = 63/179 (35.20%), Postives = 99/179 (55.31%), Query Frame = -1 Query: 274 YVGSLVGFKKPAIED-PVKTNKIPRQIPEQAWYMNPIFSILIGGILPFGAVFIELFFILTSIWLNQXXXXXXXXXXXXXXXXVTCAEITIVLCYFQLCSEDYQWWWRSYLTSGSSXXXXXXXXXXXXXTKLEITKLVSGILYFGYMLIASYAFFVLTGTIGFYACFWFTRLIYSSVKID 807 + GSL+ K+ ++ P KTN+I RQIP Q WY+ I + LI GI PFG++ +EL+FI TS+W N+ +T + +TI++ Y LC E+++W WR ++ G+ TK ++ + +LY GY + S ++TG+IGF + F R IYSS+K+D Sbjct: 490 FAGSLIARKRCHWDEHPTKTNQIARQIPFQPWYLKTIPATLIAGIFPFGSIAVELYFIYTSLWFNKIFYMFGFLFFSFLLLTLTSSLVTILITYHSLCLENWKWQWRGFIIGGAG-CALYVFIHSILFTKFKLGGFTTIVLYVGYSSVISLLCCLVTGSIGFISSMLFVRKIYSSIKVD 667
BLAST of CF834589 vs. ExPASy Swiss-Prot
Match: PHG1B_DICDI (Putative phagocytic receptor 1b OS=Dictyostelium discoideum GN=phg1b PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.406e-26 Identity = 61/178 (34.27%), Postives = 86/178 (48.31%), Query Frame = -1 Query: 274 VGSLVGFK-KPAIEDPVKTNKIPRQIPEQAWYMNPIFSILIGGILPFGAVFIELFFILTSIWLNQXXXXXXXXXXXXXXXXVTCAEITIVLCYFQLCSEDYQWWWRSYLTSGSSXXXXXXXXXXXXXTKLEITKLVSGILYFGYMLIASYAFFVLTGTIGFYACFWFTRLIYSSVKID 804 VG + G + E P +T PR++P WY ILI G LPF A++IELF+I S+W + IT+ L YFQL ED++WWW S++ GS+ + L+ YF YMLI + FF+L GT+GFY+ F + IY ++K D Sbjct: 410 VGGIAGRRLSENFEAPCRTKNFPREVPPIQWYRRLPCQILIAGFLPFSAIYIELFYIFNSVWGHSTYTLYGILCLVFLILINVTVCITVALTYFQLSMEDHKWWWNSFINGGSTVVFIYMYSIYYYYYISHMYGLLQATFYFTYMLIVCFFFFILLGTVGFYSSLIFVKRIYRNLKSD 587
BLAST of CF834589 vs. ExPASy Swiss-Prot
Match: TM9S3_MOUSE (Transmembrane 9 superfamily member 3 OS=Mus musculus GN=Tm9sf3 PE=1 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.837e-26 Identity = 59/163 (36.20%), Postives = 86/163 (52.76%), Query Frame = -1 Query: 274 PVKTNKIPRQIPEQAWYMNPIFSILIGGILPFGAVFIELFFILTSIWLNQXXXXXXXXXXXXXXXXVTCAEITIVLCYFQLCSEDYQWWWRSYLTSGSSXXXXXXXXXXXXXTKLEITKLVSGILYFGYMLIASYAFFVLTGTIGFYACFWFTRLIYSSVKID 762 P + N +PR IPE+ W+M P + +GGILPFG++FIE++FI TS W + + +TIV YF L +EDY+W W S+L++ S+ K ++ L YFGYM + S A ++ G IG+ F R IY++VKID Sbjct: 425 PCRVNAVPRPIPEKKWFMEPAVIVCLGGILPFGSIFIEMYFIFTSFWAYKIYYVYGFMMLVLVILCIVTVCVTIVCTYFLLNAEDYRWQWTSFLSAASTAIYVYMYSFYYYFFKTKMYGLFQTSFYFGYMAVFSTALGIMCGAIGYMGTSAFVRKIYTNVKID 587
BLAST of CF834589 vs. ExPASy Swiss-Prot
Match: TM9S3_HUMAN (Transmembrane 9 superfamily member 3 OS=Homo sapiens GN=TM9SF3 PE=1 SV=2) HSP 1 Score: 119.783 bits (299), Expect = 1.837e-26 Identity = 59/163 (36.20%), Postives = 86/163 (52.76%), Query Frame = -1 Query: 274 PVKTNKIPRQIPEQAWYMNPIFSILIGGILPFGAVFIELFFILTSIWLNQXXXXXXXXXXXXXXXXVTCAEITIVLCYFQLCSEDYQWWWRSYLTSGSSXXXXXXXXXXXXXTKLEITKLVSGILYFGYMLIASYAFFVLTGTIGFYACFWFTRLIYSSVKID 762 P + N +PR IPE+ W+M P + +GGILPFG++FIE++FI TS W + + +TIV YF L +EDY+W W S+L++ S+ K ++ L YFGYM + S A ++ G IG+ F R IY++VKID Sbjct: 427 PCRVNAVPRPIPEKKWFMEPAVIVCLGGILPFGSIFIEMYFIFTSFWAYKIYYVYGFMMLVLVILCIVTVCVTIVCTYFLLNAEDYRWQWTSFLSAASTAIYVYMYSFYYYFFKTKMYGLFQTSFYFGYMAVFSTALGIMCGAIGYMGTSAFVRKIYTNVKID 589 The following BLAST results are available for this feature:
BLAST of CF834589 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834589 ID=CF834589; Name=CF834589; organism=Citrus sinensis; type=EST; length=810bpback to top |