CF834589
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834589 vs. ExPASy Swiss-Prot
Match: PHG1C_DICDI (Putative phagocytic receptor 1c OS=Dictyostelium discoideum GN=phg1c PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.175e-19 Identity = 53/168 (31.55%), Postives = 80/168 (47.62%), Query Frame = -1 Query: 274 PAIEDPVKTNKIPRQIPEQAWYMNPIFSILIGGILPFGAVFIELFFILTSIWLNQXXXXXXXXXXXXXXXXVTCAEITIVLCYFQLCSEDYQWWWRSYLTSGSSXXXXXXXXXXXXXTKLEITKLVSGILYFGYMLIASYAFFVLTGTIGFYACFWFTRLIYSSVKID 777 P E PV+ N IPR IP WY N +++GGI+PF +F +L F L+S L + ++ E +++ Y+QL E+Y WWWRS L + T++E + G YF + L+ S + +IGF WFT+ IYS++ D Sbjct: 490 PPAEYPVRINPIPRFIPTAKWYQNQYLHMILGGIIPFVIIFTDLSFFLSSWVLGEHYSYSLSFALTFILMIISIVETNMIIEYYQLSLENYNWWWRSLLGPMVTGLYTFIYFIYFGITRIETEGV--GFYYFMFSLVFSILVSLFCSSIGFLGNLWFTKKIYSTLHFD 655
BLAST of CF834589 vs. ExPASy Swiss-Prot
Match: TM9S1_RAT (Transmembrane 9 superfamily member 1 OS=Rattus norvegicus GN=Tm9sf1 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.193e-17 Identity = 52/178 (29.21%), Postives = 81/178 (45.51%), Query Frame = -1 Query: 274 VGSLVGFKKPAIED-PVKTNKIPRQIPEQAWYMNPIFSILIGGILPFGAVFIELFFILTSIWLNQXXXXXXXXXXXXXXXXVTCAEITIVLCYFQLCSEDYQWWWRSYLTSGSSXXXXXXXXXXXXXTKLEITKLVSGILYFGYMLIASYAFFVLTGTIGFYACFWFTRLIYSSVKID 804 +G + G + D P +T I R+IP Q A+ +EL++I ++W + A I+I L YFQL EDY+WWWRS L+ GS+ + ++ V + +FGY L+ Y FF++ GTI F++ F R IY ++K+D Sbjct: 429 IGGIFGKNNASPFDAPCRTKNIAREIPPQPC-----------------AISVELYYIFATVWGREQYTLYGILFFVFAILLSVGACISIALTYFQLSGEDYRWWWRSVLSVGSTGLFIFLYSVFYYARRSNMSGAVQTVEFFGYSLLTGYVFFLMLGTISFFSSLKFIRYIYVNLKMD 589 The following BLAST results are available for this feature:
BLAST of CF834589 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF834589 ID=CF834589; Name=CF834589; organism=Citrus sinensis; type=EST; length=810bpback to top |