CF834590
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834590 vs. ExPASy Swiss-Prot
Match: PHG1C_DICDI (Putative phagocytic receptor 1c OS=Dictyostelium discoideum GN=phg1c PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 8.228e-25 Identity = 65/240 (27.08%), Postives = 104/240 (43.33%), Query Frame = 2 Query: 2 LFAAYASARLYKLFKGTEWKRIAFRTAITFPGIVSAIFFVLNALIWGQKSSGAVPFGTMFALIVLWFGISVPLVYVGSFVGFKKPAIEDPVKTNKIPRQIPEQAWYMNPIFSILIGGILPFGAVFIELFFILTSIWLNQXXXXXXXXXXXXXXXXXTCAEITIVLCYFQLCSEDYQWWWRSYLTSGSSXXXXXXXXXXXXXXKLEITKLVSGILYFGYMLIASYAFFVLTGTIGFYACFW 721 +F Y+S R Y + GT + T P + + F+ +W K + GT+F ++ +W + VP + S+ P E PV+ N IPR IP WY N +++GGI+PF +F +L F L+S L + + E +++ Y+QL E+Y WWWRS L + ++E + G YF + L+ S + +IGF W Sbjct: 406 IFNGYSSMRTYIMLGGTRKLYNSVITTTLIPFTILLLMFIGYFQVWSNKFTYGASIGTVFFILAMWLLVCVPCSLLSSYFVRTWPPAEYPVRINPIPRFIPTAKWYQNQYLHMILGGIIPFVIIFTDLSFFLSSWVLGEHYSYSLSFALTFILMIISIVETNMIIEYYQLSLENYNWWWRSLLGPMVTGLYTFIYFIYFGITRIETEGV--GFYYFMFSLVFSILVSLFCSSIGFLGNLW 643
BLAST of CF834590 vs. ExPASy Swiss-Prot
Match: TM9S1_RAT (Transmembrane 9 superfamily member 1 OS=Rattus norvegicus GN=Tm9sf1 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.552e-23 Identity = 64/236 (27.12%), Postives = 102/236 (43.22%), Query Frame = 2 Query: 8 AAYASARLYKLFKGTEWKRIAFRTAITFPGIVSAIFFVLNALIWGQKSSGAVPFGTMFALIVLWFGISVPLVYVGSFVGFKKPAIED-PVKTNKIPRQIPEQAWYMNPIFSILIGGILPFGAVFIELFFILTSIWLNQXXXXXXXXXXXXXXXXXTCAEITIVLCYFQLCSEDYQWWWRSYLTSGSSXXXXXXXXXXXXXXKLEITKLVSGILYFGYMLIASYAFFVLTGTIGFYA 712 + Y S+ Y+ G W T F + V+N++ W S+ A+P T+ L+ +W + PL +G G + D P +T I R+IP Q A+ +EL++I ++W + A I+I L YFQL EDY+WWWRS L+ GS+ + ++ V + +FGY L+ Y FF++ GTI F++ Sbjct: 356 SGYVSSHFYRQIGGERWVWNIILTTSLFSVPFFLTWSVVNSVHWANGSTQALPVTTILLLLTVWLLVGFPLTVIGGIFGKNNASPFDAPCRTKNIAREIPPQPC-----------------AISVELYYIFATVWGREQYTLYGILFFVFAILLSVGACISIALTYFQLSGEDYRWWWRSVLSVGSTGLFIFLYSVFYYARRSNMSGAVQTVEFFGYSLLTGYVFFLMLGTISFFS 574 The following BLAST results are available for this feature:
BLAST of CF834590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF834590 ID=CF834590; Name=CF834590; organism=Citrus sinensis; type=EST; length=721bpback to top |