CF834603
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF834603 vs. ExPASy Swiss-Prot
Match: RL17_THEPA (60S ribosomal protein L17 OS=Theileria parva GN=RPL17 PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.462e-17 Identity = 45/74 (60.81%), Postives = 54/74 (72.97%), Query Frame = 2 Query: 425 MVKYSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTPFCGGVGRTAPAK 646 MVKYS+EP N T+S KA G+ LRVHFKNT ETA AI+ + + AKRYL DV+ K+ +PF F GGVGR A AK Sbjct: 1 MVKYSREPSNLTRSAKAYGAYLRVHFKNTYETATAIKGMLVKDAKRYLNDVIERKRCVPFRKFRGGVGRCAQAK 74
BLAST of CF834603 vs. ExPASy Swiss-Prot
Match: RL17_THEAN (60S ribosomal protein L17 OS=Theileria annulata GN=RPL17 PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.216e-17 Identity = 45/74 (60.81%), Postives = 54/74 (72.97%), Query Frame = 2 Query: 425 MVKYSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTPFCGGVGRTAPAK 646 MVKYS+EP N T+S KA G+ LRVHFKNT ETA AI+ + + AKRYL DV+ K+ +PF F GGVGR A AK Sbjct: 1 MVKYSREPSNLTRSAKAYGAYLRVHFKNTYETATAIKGMLVKDAKRYLNDVIDRKRCVPFRKFRGGVGRCAQAK 74
BLAST of CF834603 vs. ExPASy Swiss-Prot
Match: RL17_PECGU (60S ribosomal protein L17 OS=Pectinaria gouldii GN=rpl-17 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 9.357e-17 Identity = 40/75 (53.33%), Postives = 52/75 (69.33%), Query Frame = 2 Query: 425 MVKYSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTPFCGGVGRTAPAKN 649 M +Y P+NP + CKA+G++ RVH+KNT ET AI+ + L KA+ YL +V+ HKQ IPF GGVGR A AKN Sbjct: 1 MARYKFNPENPNRVCKAKGTNFRVHYKNTSETGRAIKGMHLHKARSYLSNVVEHKQCIPFRRHKGGVGRCAQAKN 75
BLAST of CF834603 vs. ExPASy Swiss-Prot
Match: RL17A_YEAST (60S ribosomal protein L17-A OS=Saccharomyces cerevisiae GN=RPL17A PE=1 SV=4) HSP 1 Score: 82.8037 bits (203), Expect = 1.765e-15 Identity = 42/74 (56.76%), Postives = 49/74 (66.22%), Query Frame = 2 Query: 425 MVKYSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTPFCGGVGRTAPAK 646 M +Y NP KS ARGS LRV FKNTRETA AI LTKA++YLE V+ H++AIPF F +GRTA K Sbjct: 1 MARYGATSTNPAKSASARGSYLRVSFKNTRETAQAINGWELTKAQKYLEQVLDHQRAIPFRRFNSSIGRTAQGK 74
BLAST of CF834603 vs. ExPASy Swiss-Prot
Match: RL17B_YEAST (60S ribosomal protein L17-B OS=Saccharomyces cerevisiae GN=RPL17B PE=1 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 3.931e-15 Identity = 41/74 (55.41%), Postives = 49/74 (66.22%), Query Frame = 2 Query: 425 MVKYSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTPFCGGVGRTAPAK 646 M +Y NP KS ARGS LRV FKNTRETA AI LTKA++YL+ V+ H++AIPF F +GRTA K Sbjct: 1 MARYGATSTNPAKSASARGSYLRVSFKNTRETAQAINGWELTKAQKYLDQVLDHQRAIPFRRFNSSIGRTAQGK 74
BLAST of CF834603 vs. ExPASy Swiss-Prot
Match: RL17A_SCHPO (60S ribosomal protein L17-A OS=Schizosaccharomyces pombe GN=rpl17a PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.144e-14 Identity = 41/74 (55.41%), Postives = 49/74 (66.22%), Query Frame = 2 Query: 425 MVKYSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTPFCGGVGRTAPAK 646 MV+YS P TK KARG+ LR HFKN+RE A I + L KA +L++V HKQA+PF F GGVGRTA K Sbjct: 1 MVRYSASPALETKCAKARGAYLRTHFKNSREVAFTINGMSLKKAFIFLDNVKEHKQAVPFRRFNGGVGRTAQGK 74
BLAST of CF834603 vs. ExPASy Swiss-Prot
Match: RL17B_SCHPO (60S ribosomal protein L17-B OS=Schizosaccharomyces pombe GN=rpl17b PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.951e-14 Identity = 41/74 (55.41%), Postives = 49/74 (66.22%), Query Frame = 2 Query: 425 MVKYSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTPFCGGVGRTAPAK 646 MV+YS P TK KARG+ LR HFKN+RE A I + L KA +L++V HKQA+PF F GGVGRTA K Sbjct: 1 MVRYSAAPALETKCAKARGAYLRTHFKNSREVAFTINGMNLKKAFIFLDNVKEHKQAVPFRRFNGGVGRTAQGK 74
BLAST of CF834603 vs. ExPASy Swiss-Prot
Match: RL17_DEBHA (60S ribosomal protein L17 OS=Debaryomyces hansenii GN=RPL17 PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.265e-13 Identity = 38/74 (51.35%), Postives = 49/74 (66.22%), Query Frame = 2 Query: 425 MVKYSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTPFCGGVGRTAPAK 646 MV+Y+ NP KS ARGS LRV +KNTRETA AI L +A++YL+ V+ H++AIPF F +GRT K Sbjct: 1 MVRYAATSANPAKSASARGSYLRVSYKNTRETAQAISGWKLERAQKYLDQVLDHQRAIPFRRFNSSIGRTGQGK 74
BLAST of CF834603 vs. ExPASy Swiss-Prot
Match: RL17_NEUCR (60S ribosomal protein L17 OS=Neurospora crassa GN=rpl-17 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.071e-12 Identity = 36/74 (48.65%), Postives = 49/74 (66.22%), Query Frame = 2 Query: 425 MVKYSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTPFCGGVGRTAPAK 646 MV+Y+ P KS ++RGS LRV FKNTRETA AI L +A+++LE+V+ K+A+P + GG GR A K Sbjct: 1 MVRYAATEIAPAKSARSRGSYLRVSFKNTRETAQAINGWKLQRAQKFLENVLEKKEAVPMRRYAGGTGRAAQGK 74
BLAST of CF834603 vs. ExPASy Swiss-Prot
Match: RL17_YARLI (60S ribosomal protein L17 OS=Yarrowia lipolytica GN=RPL17 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 6.939e-12 Identity = 37/74 (50.00%), Postives = 45/74 (60.81%), Query Frame = 2 Query: 425 MVKYSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTPFCGGVGRTAPAK 646 M +YS + +PTK+ ARG+ LR FKNT E A AIR L KA YL+ V HK+AIPF G +GRT K Sbjct: 1 MTRYSVQSVDPTKTASARGAYLRTSFKNTYEVAGAIRGWNLQKALAYLDQVTDHKRAIPFRKHAGSIGRTGQGK 74 The following BLAST results are available for this feature:
BLAST of CF834603 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834603 ID=CF834603; Name=CF834603; organism=Citrus sinensis; type=EST; length=667bpback to top |