CF834625

Overview
NameCF834625
Unique NameCF834625
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length654
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834625 vs. ExPASy Swiss-Prot
Match: METK2_RAT (S-adenosylmethionine synthetase isoform type-2 OS=Rattus norvegicus GN=Mat2a PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.496e-43
Identity = 93/159 (58.49%), Postives = 111/159 (69.81%), Query Frame = -1
Query:  178 FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIVKPLKW 654
            +HL PSGRFVIGGP GDAGLTGRKII+DTY            GKD TKVDRS AY  R  AKS+V  GL RR +VQVSYAIGV  PLS+ +  YGT +  ++E+L+IVK NFD RPG+I  +LDLK+     + +TAAYGHFGRD   F WE+ K LK+
Sbjct:  242 YHLQPSGRFVIGGPQGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKGGLCRRVLVQVSYAIGVSHPLSISIFHYGTSQKSERELLEIVKNNFDLRPGVIVRDLDLKK---PIYQRTAAYGHFGRD--SFPWEVPKKLKY 395          
BLAST of CF834625 vs. ExPASy Swiss-Prot
Match: METK_BORPD (S-adenosylmethionine synthetase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=metK PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 1.953e-43
Identity = 90/152 (59.21%), Postives = 111/152 (73.03%), Query Frame = -1
Query:  199 FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 654
            F +NP+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK++VA+GLAR+C VQVSYAIGV EP+++ V + GTG IPD++I K+V+E+FD RP  I   LDL R     + KTAAYGHFGR +P+F+WE
Sbjct:  227 FLVNPTGRFVIGGPQGDCGLTGRKIIVDTYGGACPHGGGAFSGKDPSKVDRSAAYAARYVAKNVVAAGLARQCQVQVSYAIGVAEPINITVYTEGTGVIPDEQIAKLVREHFDLRPKGIVNMLDLLR---PIYAKTAAYGHFGRAEPEFSWE 375          
BLAST of CF834625 vs. ExPASy Swiss-Prot
Match: METK_STACT (S-adenosylmethionine synthetase OS=Staphylococcus carnosus (strain TM300) GN=metK PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.551e-43
Identity = 88/154 (57.14%), Postives = 111/154 (72.08%), Query Frame = -1
Query:  193 FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIV 654
            F +NP+GRFVIGGP GDAGLTGRKII+DTY            GKDPTKVDRS AY  R  AK+IVA+GLA +C VQ++YAIGV EP+S+ +D++GTGK+P+ ++++ V++NFD RP  I   LDLKR     + +TAAYGHFGR D    WE V
Sbjct:  236 FFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGFARHGGGCFSGKDPTKVDRSAAYAARYVAKNIVAAGLADKCEVQLAYAIGVAEPVSISIDTFGTGKVPESKLVEAVRDNFDLRPAGIIKMLDLKR---PIYKQTAAYGHFGRTDVALPWERV 386          
BLAST of CF834625 vs. ExPASy Swiss-Prot
Match: METK_NITEU (S-adenosylmethionine synthetase OS=Nitrosomonas europaea GN=metK PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.551e-43
Identity = 87/150 (58.00%), Postives = 109/150 (72.67%), Query Frame = -1
Query:  199 LNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 648
            +NP+GRFV+GGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA+GLAR+C VQV+YAIGV +P+S+ V ++GTGKIPD ++ +++  +FD RP  I   LDL R   G   KTAAYGHFGR++P FTWE
Sbjct:  227 INPTGRFVVGGPMGDCGLTGRKIIVDTYGGTAHHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLARKCEVQVAYAIGVAKPVSLMVQTFGTGKIPDGKLAELIARHFDLRPRAIIHELDLLRPIYG---KTAAYGHFGREEPSFTWE 373          
BLAST of CF834625 vs. ExPASy Swiss-Prot
Match: METK_CALS8 (S-adenosylmethionine synthetase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=metK PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.551e-43
Identity = 89/151 (58.94%), Postives = 109/151 (72.19%), Query Frame = -1
Query:  199 HLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 651
            ++NP+GRFVIGGP GD+GLTGRKII+DTY            GKDPTKVDRS  Y  R  AK+IVA+GLA++C VQ+SYAIGV  PLS+ VD++GTGKI D++I +IVK  FD RP  I  +LDL+R     + K AAYGHFGR+D D  WE
Sbjct:  234 YINPTGRFVIGGPQGDSGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSATYAARYVAKNIVAAGLAKKCEVQLSYAIGVARPLSIRVDTFGTGKIDDEKIAEIVKRVFDLRPAAIIRDLDLRR---PIYKKVAAYGHFGREDLDLPWE 381          
BLAST of CF834625 vs. ExPASy Swiss-Prot
Match: METK_GEOSM (S-adenosylmethionine synthetase OS=Geobacter sp. (strain M21) GN=metK PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 3.332e-43
Identity = 92/152 (60.53%), Postives = 108/152 (71.05%), Query Frame = -1
Query:  199 FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 654
            F +NP+GRFVIGGP GD GLTGRKII+D+Y            GKDP+KVDRS AY+ R  AK++VASG+  RC VQV+YAIGV EP+SV VD  GTGKIP K I +IV+E FD RP  I   LDL R     + KTAAYGHFGR+ P+FTWE
Sbjct:  227 FLINPTGRFVIGGPMGDCGLTGRKIIVDSYGGHGAHGGGAFSGKDPSKVDRSAAYMGRYVAKNLVASGVCERCEVQVAYAIGVAEPVSVMVDCNGTGKIPSKRISEIVREVFDMRPRAIIEQLDLLR---PIYRKTAAYGHFGRELPEFTWE 375          
BLAST of CF834625 vs. ExPASy Swiss-Prot
Match: METK_AZOSB (S-adenosylmethionine synthetase OS=Azoarcus sp. (strain BH72) GN=metK PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 3.332e-43
Identity = 86/150 (57.33%), Postives = 111/150 (74.00%), Query Frame = -1
Query:  199 LNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 648
            +NP+GRFVIGGPHGD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK++VA+GLA +C VQV+YAIGV +P+S+ V+++GTGKI D +I+ +++ +FD RP  I   LDL R     + +TAAYGHFGRD+P+FTWE
Sbjct:  228 INPTGRFVIGGPHGDCGLTGRKIIVDTYGGAAHHGGGAFSGKDPSKVDRSAAYAGRYVAKNVVAAGLADKCEVQVAYAIGVAKPVSLMVNTFGTGKIADDKIVDLIRAHFDLRPKAIIQTLDLLR---PIYSRTAAYGHFGRDEPEFTWE 374          
BLAST of CF834625 vs. ExPASy Swiss-Prot
Match: METK_RALEH (S-adenosylmethionine synthetase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=metK PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 4.352e-43
Identity = 90/150 (60.00%), Postives = 110/150 (73.33%), Query Frame = -1
Query:  199 LNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 648
            +NP+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK++VASGLAR+C VQVSYAIGV  P++V V + GTGKIPD +I ++V+E+FD RP  I   LDL R     + KTAAYGHFGR++P+F+WE
Sbjct:  227 VNPTGRFVIGGPQGDCGLTGRKIIVDTYGGASPHGGGAFSGKDPSKVDRSAAYAARYVAKNVVASGLARQCQVQVSYAIGVARPINVTVYTEGTGKIPDAKIAELVQEHFDLRPKGIVQMLDLLR---PIYEKTAAYGHFGREEPEFSWE 373          
BLAST of CF834625 vs. ExPASy Swiss-Prot
Match: METK_MAGSM (S-adenosylmethionine synthetase OS=Magnetococcus sp. (strain MC-1) GN=metK PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 4.352e-43
Identity = 87/152 (57.24%), Postives = 113/152 (74.34%), Query Frame = -1
Query:  199 FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 654
            + +NP+GRFVIGGP GDAG+TGRKII+DTY            GKDP+KVDRS AY+ R  AK+IVA+GLA +C +QV+YAIGV +P+SV VD++GTGK+ D+ I ++VK++FD RP  I   LDL R     + K+AAYGHFGR+ P+FTWE
Sbjct:  227 YFINPTGRFVIGGPVGDAGVTGRKIIVDTYGGMGSHGGGAFSGKDPSKVDRSSAYMGRYVAKNIVAAGLAEKCEIQVAYAIGVSQPMSVMVDTFGTGKLDDEAITELVKKHFDLRPKAIVQQLDLLR---PIYKKSAAYGHFGRELPEFTWE 375          
BLAST of CF834625 vs. ExPASy Swiss-Prot
Match: METK_COXBN (S-adenosylmethionine synthetase OS=Coxiella burnetii (strain Dugway 5J108-111) GN=metK PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 4.352e-43
Identity = 88/152 (57.89%), Postives = 108/152 (71.05%), Query Frame = -1
Query:  199 FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 654
            F +NP+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRSGAY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GTGKI +    +++KE+FD RPG I   L+L R     +  TA YGHFGR++P+FTWE
Sbjct:  224 FLVNPTGRFVIGGPVGDCGLTGRKIIVDTYGGMARHGGGCFSGKDPSKVDRSGAYAARYVAKNIVAGGLADRCEIQVSYAIGVAEPTSISVETFGTGKIDEVRTQQLIKEHFDLRPGKIIEELNLLR---SIYKATATYGHFGREEPEFTWE 372          
The following BLAST results are available for this feature:
BLAST of CF834625 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK2_RAT1.496e-4358.49S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK_BORPD1.953e-4359.21S-adenosylmethionine synthetase OS=Bordetella petr... [more]
METK_STACT2.551e-4357.14S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_NITEU2.551e-4358.00S-adenosylmethionine synthetase OS=Nitrosomonas eu... [more]
METK_CALS82.551e-4358.94S-adenosylmethionine synthetase OS=Caldicellulosir... [more]
METK_GEOSM3.332e-4360.53S-adenosylmethionine synthetase OS=Geobacter sp. (... [more]
METK_AZOSB3.332e-4357.33S-adenosylmethionine synthetase OS=Azoarcus sp. (s... [more]
METK_RALEH4.352e-4360.00S-adenosylmethionine synthetase OS=Ralstonia eutro... [more]
METK_MAGSM4.352e-4357.24S-adenosylmethionine synthetase OS=Magnetococcus s... [more]
METK_COXBN4.352e-4357.89S-adenosylmethionine synthetase OS=Coxiella burnet... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05N14_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05N14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834625 ID=CF834625; Name=CF834625; organism=Citrus sinensis; type=EST; length=654bp
CCTTGGATTGAGAATCCATTAAACATATTTATTAAAAAAAAAAAGGAAAA
GAAAAAGAAAGAAAGAAAGAAAACATTCATGTAACTGAAACAGAAGTAAA
AAAGAAAAGTAGACATATATAAGCACCAATGAGAGGCCAGCAGCTCATCC
TTGATTAGTTTAAGCTTGAAGTTTCTCCCACTTGAGTGGCTTAACAATCT
CCCAAGTGAAATCAGGATCATCTCTGCCAAAGTGCCCATAAGCGGCAGTC
TTCAAGAACCTGCCGTTGCCACCCCTCTTGAGATCAAGATTAATAGAAAT
CATCCCAGGCCTAAAATCAAAATTCTCCTTCACAATCTTCAAAATTTCCT
TGTCAGGGATCTTCCCAGTCCCATAACTATCAACAAAAACTGACAAAGGC
TCGGGCACACCAATAGCGTAAGAAACCTGAACAATGCATCTCCTGGCAAG
CCCGCTTGCCACAATACTCTTAGCAGCTTGCCTTACAATGTAAGCACCGC
TTCTATCAACCTTGGTAGGATCTTTCCCTGAGAAAGCCCCACCACCGTGT
GCCCCCCAGCCACCATAAGTATCAATAATAATCTTCCGGCCGGTGAGCCC
AGCATCACCGTGAGGGCCACCAATCACAAAACGGCCAGATGGGTTAAGAT
GGAA
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