CF834625

Overview
NameCF834625
Unique NameCF834625
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length654
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF834625 vs. ExPASy Swiss-Prot
Match: METK_BURTA (S-adenosylmethionine synthetase OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=metK PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 4.352e-43
Identity = 89/152 (58.55%), Postives = 111/152 (73.03%), Query Frame = -1 
Query:  199 FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 654
            F +NP+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA+GLA R ++QVSYAIGV EP SV V+++GTG++ D+ I K+V+E+FD RP  I   LDL R     + KTAAYGHFGR++P+F+WE
Sbjct:  226 FLVNPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFGTGRVSDETITKLVREHFDLRPKGIIQMLDLLR---PIYEKTAAYGHFGREEPEFSWE 374
[Close]
BLAST of CF834625 vs. ExPASy Swiss-Prot
Match: METK_BURPS (S-adenosylmethionine synthetase OS=Burkholderia pseudomallei GN=metK PE=1 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 4.352e-43
Identity = 89/152 (58.55%), Postives = 111/152 (73.03%), Query Frame = -1 
Query:  199 FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 654
            F +NP+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA+GLA R ++QVSYAIGV EP SV V+++GTG++ D+ I K+V+E+FD RP  I   LDL R     + KTAAYGHFGR++P+F+WE
Sbjct:  226 FLVNPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFGTGRVSDETITKLVREHFDLRPKGIIQMLDLLR---PIYEKTAAYGHFGREEPEFSWE 374
[Close]
BLAST of CF834625 vs. ExPASy Swiss-Prot
Match: METK_BURPP (S-adenosylmethionine synthetase OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=metK PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 4.352e-43
Identity = 88/152 (57.89%), Postives = 111/152 (73.03%), Query Frame = -1 
Query:  199 FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 654
            F +NP+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA+GLA RC++QVSYAIGV +P SV V+++GTG++ D  I ++V+E+FD RP  I   LDL R     + K+AAYGHFGR++P+FTWE
Sbjct:  226 FLVNPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRCLIQVSYAIGVAQPTSVMVNTFGTGRVSDATITRLVQEHFDLRPKGIIQMLDLLR---PIYEKSAAYGHFGREEPEFTWE 374
[Close]
BLAST of CF834625 vs. ExPASy Swiss-Prot
Match: METK_BURP6 (S-adenosylmethionine synthetase OS=Burkholderia pseudomallei (strain 668) GN=metK PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 4.352e-43
Identity = 89/152 (58.55%), Postives = 111/152 (73.03%), Query Frame = -1 
Query:  199 FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 654
            F +NP+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA+GLA R ++QVSYAIGV EP SV V+++GTG++ D+ I K+V+E+FD RP  I   LDL R     + KTAAYGHFGR++P+F+WE
Sbjct:  226 FLVNPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFGTGRVSDETITKLVREHFDLRPKGIIQMLDLLR---PIYEKTAAYGHFGREEPEFSWE 374
[Close]
BLAST of CF834625 vs. ExPASy Swiss-Prot
Match: METK_BURP1 (S-adenosylmethionine synthetase OS=Burkholderia pseudomallei (strain 1710b) GN=metK PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 4.352e-43
Identity = 89/152 (58.55%), Postives = 111/152 (73.03%), Query Frame = -1 
Query:  199 FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 654
            F +NP+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA+GLA R ++QVSYAIGV EP SV V+++GTG++ D+ I K+V+E+FD RP  I   LDL R     + KTAAYGHFGR++P+F+WE
Sbjct:  226 FLVNPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFGTGRVSDETITKLVREHFDLRPKGIIQMLDLLR---PIYEKTAAYGHFGREEPEFSWE 374
[Close]
BLAST of CF834625 vs. ExPASy Swiss-Prot
Match: METK_BURP0 (S-adenosylmethionine synthetase OS=Burkholderia pseudomallei (strain 1106a) GN=metK PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 4.352e-43
Identity = 89/152 (58.55%), Postives = 111/152 (73.03%), Query Frame = -1 
Query:  199 FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 654
            F +NP+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA+GLA R ++QVSYAIGV EP SV V+++GTG++ D+ I K+V+E+FD RP  I   LDL R     + KTAAYGHFGR++P+F+WE
Sbjct:  226 FLVNPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFGTGRVSDETITKLVREHFDLRPKGIIQMLDLLR---PIYEKTAAYGHFGREEPEFSWE 374
[Close]
BLAST of CF834625 vs. ExPASy Swiss-Prot
Match: METK_BURMS (S-adenosylmethionine synthetase OS=Burkholderia mallei (strain SAVP1) GN=metK PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 4.352e-43
Identity = 89/152 (58.55%), Postives = 111/152 (73.03%), Query Frame = -1 
Query:  199 FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 654
            F +NP+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA+GLA R ++QVSYAIGV EP SV V+++GTG++ D+ I K+V+E+FD RP  I   LDL R     + KTAAYGHFGR++P+F+WE
Sbjct:  226 FLVNPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFGTGRVSDETITKLVREHFDLRPKGIIQMLDLLR---PIYEKTAAYGHFGREEPEFSWE 374
[Close]
BLAST of CF834625 vs. ExPASy Swiss-Prot
Match: METK_BURMA (S-adenosylmethionine synthetase OS=Burkholderia mallei GN=metK PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 4.352e-43
Identity = 89/152 (58.55%), Postives = 111/152 (73.03%), Query Frame = -1 
Query:  199 FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 654
            F +NP+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA+GLA R ++QVSYAIGV EP SV V+++GTG++ D+ I K+V+E+FD RP  I   LDL R     + KTAAYGHFGR++P+F+WE
Sbjct:  226 FLVNPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFGTGRVSDETITKLVREHFDLRPKGIIQMLDLLR---PIYEKTAAYGHFGREEPEFSWE 374
[Close]
BLAST of CF834625 vs. ExPASy Swiss-Prot
Match: METK_BURM9 (S-adenosylmethionine synthetase OS=Burkholderia mallei (strain NCTC 10229) GN=metK PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 4.352e-43
Identity = 89/152 (58.55%), Postives = 111/152 (73.03%), Query Frame = -1 
Query:  199 FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 654
            F +NP+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA+GLA R ++QVSYAIGV EP SV V+++GTG++ D+ I K+V+E+FD RP  I   LDL R     + KTAAYGHFGR++P+F+WE
Sbjct:  226 FLVNPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFGTGRVSDETITKLVREHFDLRPKGIIQMLDLLR---PIYEKTAAYGHFGREEPEFSWE 374
[Close]
BLAST of CF834625 vs. ExPASy Swiss-Prot
Match: METK_BURM7 (S-adenosylmethionine synthetase OS=Burkholderia mallei (strain NCTC 10247) GN=metK PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 4.352e-43
Identity = 89/152 (58.55%), Postives = 111/152 (73.03%), Query Frame = -1 
Query:  199 FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 654
            F +NP+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA+GLA R ++QVSYAIGV EP SV V+++GTG++ D+ I K+V+E+FD RP  I   LDL R     + KTAAYGHFGR++P+F+WE
Sbjct:  226 FLVNPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFGTGRVSDETITKLVREHFDLRPKGIIQMLDLLR---PIYEKTAAYGHFGREEPEFSWE 374
The following BLAST results are available for this feature:
BLAST of CF834625 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_BURTA4.352e-4358.55S-adenosylmethionine synthetase OS=Burkholderia th... [more]
METK_BURPS4.352e-4358.55S-adenosylmethionine synthetase OS=Burkholderia ps... [more]
METK_BURPP4.352e-4357.89S-adenosylmethionine synthetase OS=Burkholderia ph... [more]
METK_BURP64.352e-4358.55S-adenosylmethionine synthetase OS=Burkholderia ps... [more]
METK_BURP14.352e-4358.55S-adenosylmethionine synthetase OS=Burkholderia ps... [more]
METK_BURP04.352e-4358.55S-adenosylmethionine synthetase OS=Burkholderia ps... [more]
METK_BURMS4.352e-4358.55S-adenosylmethionine synthetase OS=Burkholderia ma... [more]
METK_BURMA4.352e-4358.55S-adenosylmethionine synthetase OS=Burkholderia ma... [more]
METK_BURM94.352e-4358.55S-adenosylmethionine synthetase OS=Burkholderia ma... [more]
METK_BURM74.352e-4358.55S-adenosylmethionine synthetase OS=Burkholderia ma... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05N14_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05N14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834625 ID=CF834625; Name=CF834625; organism=Citrus sinensis; type=EST; length=654bp
CCTTGGATTGAGAATCCATTAAACATATTTATTAAAAAAAAAAAGGAAAA
GAAAAAGAAAGAAAGAAAGAAAACATTCATGTAACTGAAACAGAAGTAAA
AAAGAAAAGTAGACATATATAAGCACCAATGAGAGGCCAGCAGCTCATCC
TTGATTAGTTTAAGCTTGAAGTTTCTCCCACTTGAGTGGCTTAACAATCT
CCCAAGTGAAATCAGGATCATCTCTGCCAAAGTGCCCATAAGCGGCAGTC
TTCAAGAACCTGCCGTTGCCACCCCTCTTGAGATCAAGATTAATAGAAAT
CATCCCAGGCCTAAAATCAAAATTCTCCTTCACAATCTTCAAAATTTCCT
TGTCAGGGATCTTCCCAGTCCCATAACTATCAACAAAAACTGACAAAGGC
TCGGGCACACCAATAGCGTAAGAAACCTGAACAATGCATCTCCTGGCAAG
CCCGCTTGCCACAATACTCTTAGCAGCTTGCCTTACAATGTAAGCACCGC
TTCTATCAACCTTGGTAGGATCTTTCCCTGAGAAAGCCCCACCACCGTGT
GCCCCCCAGCCACCATAAGTATCAATAATAATCTTCCGGCCGGTGAGCCC
AGCATCACCGTGAGGGCCACCAATCACAAAACGGCCAGATGGGTTAAGAT
GGAA
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