CF834625

Overview
NameCF834625
Unique NameCF834625
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length654
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834625 vs. ExPASy Swiss-Prot
Match: METK_OSTTA (S-adenosylmethionine synthetase OS=Ostreococcus tauri GN=METK PE=3 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 7.389e-59
Identity = 116/158 (73.42%), Postives = 126/158 (79.75%), Query Frame = -1
Query:  184 FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD-FTWEIVKPL 654
            FHLNPSGRFVIGGP GDAGLTGRKIIIDTY            GKDPTKVDRSGAYI RQ AKSIVA+GLARR + Q+SYAIGV +PLS+ VD+YG+GKIPD EIL+ VKE FDFR GMI  +LDLKRGGN R+  TAAYGHFGRDD D FTWE V PL
Sbjct:  229 FHLNPSGRFVIGGPDGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQVAKSIVAAGLARRALFQISYAIGVAQPLSIHVDTYGSGKIPDSEILEKVKEKFDFRAGMIGKSLDLKRGGNKRYQTTAAYGHFGRDDTDVFTWEKVVPL 386          
BLAST of CF834625 vs. ExPASy Swiss-Prot
Match: METK2_PEA (S-adenosylmethionine synthetase 2 OS=Pisum sativum GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 9.032e-57
Identity = 112/142 (78.87%), Postives = 119/142 (83.80%), Query Frame = -1
Query:  229 FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHF 654
            FHLNPSGRF  GGPHGDAGLTGRKIIIDTY            GKDPTKVDRSGAYIVR+AAKSIVA+GLARRC+VQVSYAIGVPEPLSVFVDSYGTGKIPD+EIL IVKE FDFRPGMISI+LDL RGGNGRF + +    F
Sbjct:  232 FHLNPSGRFRHGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVREAAKSIVANGLARRCLVQVSYAIGVPEPLSVFVDSYGTGKIPDREILNIVKEAFDFRPGMISISLDLLRGGNGRFFEDSCIWTF 373          
BLAST of CF834625 vs. ExPASy Swiss-Prot
Match: METK_DICDI (S-adenosylmethionine synthetase OS=Dictyostelium discoideum GN=metK PE=1 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 6.269e-50
Identity = 103/158 (65.19%), Postives = 117/158 (74.05%), Query Frame = -1
Query:  181 FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIVKPLK 654
            +HLNPSGRFVIGGP GD+GLTGRKIIID+Y            GKD TKVDRSGAY  R  AKS+VA+GLA RC+VQVSY+IGV +PLSVFVD+YGTGK  D EIL I+  NFD RPG +  +L L R     F KTA+ GHFGR+DPDFTWE VK LK
Sbjct:  229 YHLNPSGRFVIGGPMGDSGLTGRKIIIDSYGGWGAHGGGAFSGKDATKVDRSGAYAARWIAKSLVAAGLADRCLVQVSYSIGVAKPLSVFVDTYGTGKKTDAEILAIIDNNFDLRPGCLMRDLQLTR---PIFQKTASGGHFGRNDPDFTWETVKELK 383          
BLAST of CF834625 vs. ExPASy Swiss-Prot
Match: METK_SYNWW (S-adenosylmethionine synthetase OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=metK PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 1.888e-46
Identity = 90/152 (59.21%), Postives = 117/152 (76.97%), Query Frame = -1
Query:  199 FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 654
            F++NP+GRFVIGGP GD+GLTGRKII+DTY            GKDPTKVDRS +Y++R  AK+IVA+GLA RC +QV+YAIGV  PLS+ V+++GTGKI D +I++++K+NFD RP  I  +LDL+R     + KTAAYGHFGR+D +FTWE
Sbjct:  234 FYVNPTGRFVIGGPQGDSGLTGRKIIVDTYGGMARHGGGAFSGKDPTKVDRSASYMLRYVAKNIVAAGLAERCEIQVAYAIGVANPLSINVNTFGTGKISDDKIIELIKKNFDLRPAAIIRDLDLRR---PIYRKTAAYGHFGREDAEFTWE 382          
BLAST of CF834625 vs. ExPASy Swiss-Prot
Match: METK_ACACA (S-adenosylmethionine synthetase OS=Acanthamoeba castellanii GN=metK PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 3.560e-45
Identity = 99/161 (61.49%), Postives = 112/161 (69.57%), Query Frame = -1
Query:  178 FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGT--GKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIVKPLKW 654
            FHLNPSGRFVIGGP G+AGLTG KIIIDTY            GKDP+KVDRS AY  R  AKS+VA GLA R +VQVSYAIGV  PLSVFVDSYGT  G   D+++L I K NFD RPG I  +L L+R     + KTA +GHFGR+DPDF WE  K L +
Sbjct:  231 FHLNPSGRFVIGGPQGEAGLTGGKIIIDTYGGWGAHGGGAFSGKDPSKVDRSAAYAARWIAKSLVARGLANRALVQVSYAIGVSHPLSVFVDSYGTAQGGRTDEDLLAISKSNFDLRPGKIINDLQLRR---PIYEKTAYHGHFGRNDPDFLWEAPKKLNF 388          
BLAST of CF834625 vs. ExPASy Swiss-Prot
Match: METK_SYMTH (S-adenosylmethionine synthetase OS=Symbiobacterium thermophilum GN=metK PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.014e-44
Identity = 87/152 (57.24%), Postives = 110/152 (72.37%), Query Frame = -1
Query:  199 FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 654
            + +NP+GRFV+GGP GD GLTGRKII+DTY            GKDPTKVDRSGAY  R  AK+IVA+GLAR+C VQV+YAIGV  P+S+ V ++GTGK+PD+ + ++V+E FD RPG I  +LDL+R     + + AAYGHFGR D D  WE
Sbjct:  236 YFINPTGRFVVGGPQGDTGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSGAYAARWVAKNIVAAGLARKCEVQVAYAIGVAHPVSILVTTFGTGKLPDERLAQLVRETFDLRPGAIIRDLDLRR---PIYRQVAAYGHFGRPDLDLPWE 384          
BLAST of CF834625 vs. ExPASy Swiss-Prot
Match: METK_CHRVO (S-adenosylmethionine synthetase OS=Chromobacterium violaceum GN=metK PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.014e-44
Identity = 91/152 (59.87%), Postives = 114/152 (75.00%), Query Frame = -1
Query:  199 FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 654
            F +NP+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA+GLAR+C +QVSYAIGV EP S+ VD++GT KIP+++I+++VK++FD RP  I   LDL R   G   KTAAYGHFGR++P+F+WE
Sbjct:  227 FLINPTGRFVIGGPMGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLARQCQIQVSYAIGVAEPTSIAVDTFGTNKIPNEKIVELVKKHFDLRPKGIIQMLDLLRPIYG---KTAAYGHFGREEPEFSWE 375          
BLAST of CF834625 vs. ExPASy Swiss-Prot
Match: METK5_CAEEL (Probable S-adenosylmethionine synthetase 5 OS=Caenorhabditis elegans GN=sams-5 PE=2 SV=2)

HSP 1 Score: 178.333 bits (451), Expect = 3.014e-44
Identity = 95/161 (59.01%), Postives = 111/161 (68.94%), Query Frame = -1
Query:  172 FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIVKPLKWEK 654
            +HLNP G FV+GGP GDAGLTGRKII+DTY            GKDPTKVDRS AY  R  AKS+V +GL RRC+VQVSYAIGV +PLSV V S+GT  + + E+LKIV +NFD RPGMI  NLDLKR     +  TA  GHFG +  DF WE  + LK +K
Sbjct:  230 YHLNPCGSFVVGGPMGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDPTKVDRSAAYAARWVAKSLVKAGLCRRCLVQVSYAIGVAKPLSVMVFSFGTSALNEAELLKIVNDNFDLRPGMIIKNLDLKR---AIYEPTAENGHFGHN--DFPWEQARKLKIDK 385          
BLAST of CF834625 vs. ExPASy Swiss-Prot
Match: METK_CELJU (S-adenosylmethionine synthetase OS=Cellvibrio japonicus (strain Ueda107) GN=metK PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 3.936e-44
Identity = 87/152 (57.24%), Postives = 114/152 (75.00%), Query Frame = -1
Query:  199 FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 654
            +H+NP+G+F+IGGP GD GLTGRKII+D+Y            GKDP+KVDRS AY  R  AK+IVA+GLA +C +QVSYAIGV EP S+ ++++GTGK+PD EI+K+V+E+FD RP  +   L+LKR     + +TAAYGHFGR+ PDFTWE
Sbjct:  224 YHINPTGQFIIGGPVGDCGLTGRKIIVDSYGGMARHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLADKCEIQVSYAIGVAEPTSISINTFGTGKLPDAEIIKLVREHFDLRPRGLIEMLNLKR---PIYRQTAAYGHFGRELPDFTWE 372          
BLAST of CF834625 vs. ExPASy Swiss-Prot
Match: METK_DECAR (S-adenosylmethionine synthetase OS=Dechloromonas aromatica (strain RCB) GN=metK PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 5.141e-44
Identity = 88/150 (58.67%), Postives = 110/150 (73.33%), Query Frame = -1
Query:  199 LNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 648
            +NP+GRFV+GGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA+GLA RC+VQVSYAIGV EP S+ V++YGTGK+ ++ +  +V+++FD RP  I   LDL R     + KTAAYGHFGRD+P+FTWE
Sbjct:  227 VNPTGRFVVGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYATRYVAKNIVAAGLASRCLVQVSYAIGVAEPTSIMVETYGTGKVSNETLTALVRKHFDLRPKGIVNMLDLLR---PIYQKTAAYGHFGRDEPEFTWE 373          
The following BLAST results are available for this feature:
BLAST of CF834625 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_OSTTA7.389e-5973.42S-adenosylmethionine synthetase OS=Ostreococcus ta... [more]
METK2_PEA9.032e-5778.87S-adenosylmethionine synthetase 2 OS=Pisum sativum... [more]
METK_DICDI6.269e-5065.19S-adenosylmethionine synthetase OS=Dictyostelium d... [more]
METK_SYNWW1.888e-4659.21S-adenosylmethionine synthetase OS=Syntrophomonas ... [more]
METK_ACACA3.560e-4561.49S-adenosylmethionine synthetase OS=Acanthamoeba ca... [more]
METK_SYMTH3.014e-4457.24S-adenosylmethionine synthetase OS=Symbiobacterium... [more]
METK_CHRVO3.014e-4459.87S-adenosylmethionine synthetase OS=Chromobacterium... [more]
METK5_CAEEL3.014e-4459.01Probable S-adenosylmethionine synthetase 5 OS=Caen... [more]
METK_CELJU3.936e-4457.24S-adenosylmethionine synthetase OS=Cellvibrio japo... [more]
METK_DECAR5.141e-4458.67S-adenosylmethionine synthetase OS=Dechloromonas a... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05N14_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05N14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834625 ID=CF834625; Name=CF834625; organism=Citrus sinensis; type=EST; length=654bp
CCTTGGATTGAGAATCCATTAAACATATTTATTAAAAAAAAAAAGGAAAA
GAAAAAGAAAGAAAGAAAGAAAACATTCATGTAACTGAAACAGAAGTAAA
AAAGAAAAGTAGACATATATAAGCACCAATGAGAGGCCAGCAGCTCATCC
TTGATTAGTTTAAGCTTGAAGTTTCTCCCACTTGAGTGGCTTAACAATCT
CCCAAGTGAAATCAGGATCATCTCTGCCAAAGTGCCCATAAGCGGCAGTC
TTCAAGAACCTGCCGTTGCCACCCCTCTTGAGATCAAGATTAATAGAAAT
CATCCCAGGCCTAAAATCAAAATTCTCCTTCACAATCTTCAAAATTTCCT
TGTCAGGGATCTTCCCAGTCCCATAACTATCAACAAAAACTGACAAAGGC
TCGGGCACACCAATAGCGTAAGAAACCTGAACAATGCATCTCCTGGCAAG
CCCGCTTGCCACAATACTCTTAGCAGCTTGCCTTACAATGTAAGCACCGC
TTCTATCAACCTTGGTAGGATCTTTCCCTGAGAAAGCCCCACCACCGTGT
GCCCCCCAGCCACCATAAGTATCAATAATAATCTTCCGGCCGGTGAGCCC
AGCATCACCGTGAGGGCCACCAATCACAAAACGGCCAGATGGGTTAAGAT
GGAA
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