CF834625

Overview
NameCF834625
Unique NameCF834625
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length654
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834625 vs. ExPASy Swiss-Prot
Match: METK_TERTT (S-adenosylmethionine synthetase OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=metK PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 6.714e-44
Identity = 90/153 (58.82%), Postives = 113/153 (73.86%), Query Frame = -1
Query:  196 FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEI 654
            +H+NP+G+F+IGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA+GLA RC +QVSYAIGV EP S+ V+++GTGKI D +I+++VKE+FD RP  +   LDL R     + KTAAYGHFGR+ P+FTWEI
Sbjct:  224 YHINPTGQFIIGGPVGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLADRCEIQVSYAIGVAEPTSISVNTFGTGKIDDGKIVELVKEHFDLRPRGLIEMLDLMR---PIYRKTAAYGHFGRELPEFTWEI 373          
BLAST of CF834625 vs. ExPASy Swiss-Prot
Match: METK_PELCD (S-adenosylmethionine synthetase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=metK PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 6.714e-44
Identity = 86/152 (56.58%), Postives = 111/152 (73.03%), Query Frame = -1
Query:  199 FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 654
            F++NP+GRFV+GGP GD GLTGRKII+DTY            GKDP+KVDRS +Y+ R  AK++VA+ LAR+C VQ++YAIGV EP+S+ V+++GTG +P  EI +IV+E FD RP  I   LDL R     + KTAAYGHFGR+ P+FTWE
Sbjct:  227 FYVNPTGRFVVGGPQGDCGLTGRKIIVDTYGGQGSHGGGAFSGKDPSKVDRSASYMARYVAKNVVAAKLARKCEVQIAYAIGVAEPVSIMVNTFGTGVLPSNEIARIVREEFDMRPAAIIETLDLLR---PIYRKTAAYGHFGRELPEFTWE 375          
BLAST of CF834625 vs. ExPASy Swiss-Prot
Match: METK_THIDA (S-adenosylmethionine synthetase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=metK PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 8.769e-44
Identity = 87/151 (57.62%), Postives = 114/151 (75.50%), Query Frame = -1
Query:  196 LNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEI 648
            +NP+GRFV+GGP GDAGLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA+GLA +C+VQVSYAIGV +P S+ VD++GTGKIP+ +I+++++ +FD RP  I   LDL R     + +TA+YGHFGRD+P+FTWE+
Sbjct:  228 VNPTGRFVVGGPMGDAGLTGRKIIVDTYGGASPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLADKCMVQVSYAIGVAKPTSLMVDTFGTGKIPEAKIVELIQAHFDLRPKGIVNMLDLLR---PIYTRTASYGHFGRDEPEFTWEV 375          
BLAST of CF834625 vs. ExPASy Swiss-Prot
Match: METK_LARHH (S-adenosylmethionine synthetase OS=Laribacter hongkongensis (strain HLHK9) GN=metK PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.145e-43
Identity = 89/152 (58.55%), Postives = 112/152 (73.68%), Query Frame = -1
Query:  199 FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 654
            F +NP+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA+GLAR+C +QVSYAIG+ EP S+ VD++GT  IP+++I+++VK +FD RP  I   LDL R     + KTAAYGHFGR++P+FTWE
Sbjct:  227 FLINPTGRFVIGGPMGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLARQCQIQVSYAIGIAEPTSISVDTFGTNAIPNEKIVELVKRHFDLRPKGIIQMLDLLR---PIYTKTAAYGHFGREEPEFTWE 375          
BLAST of CF834625 vs. ExPASy Swiss-Prot
Match: METK_COXBU (S-adenosylmethionine synthetase OS=Coxiella burnetii GN=metK PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.145e-43
Identity = 89/152 (58.55%), Postives = 109/152 (71.71%), Query Frame = -1
Query:  199 FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 654
            F +NP+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRSGAY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GTGKI +  I +++KE+FD RPG I   L+L R     +  TA YGHFGR++P+FTWE
Sbjct:  224 FLVNPTGRFVIGGPVGDCGLTGRKIIVDTYGGMARHGGGCFSGKDPSKVDRSGAYAARYVAKNIVAGGLADRCEIQVSYAIGVAEPTSISVETFGTGKIDEVRIQQLIKEHFDLRPGKIIEELNLLR---SIYKATATYGHFGREEPEFTWE 372          
BLAST of CF834625 vs. ExPASy Swiss-Prot
Match: METK_COXBR (S-adenosylmethionine synthetase OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=metK PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.145e-43
Identity = 89/152 (58.55%), Postives = 109/152 (71.71%), Query Frame = -1
Query:  199 FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 654
            F +NP+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRSGAY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GTGKI +  I +++KE+FD RPG I   L+L R     +  TA YGHFGR++P+FTWE
Sbjct:  224 FLVNPTGRFVIGGPVGDCGLTGRKIIVDTYGGMARHGGGCFSGKDPSKVDRSGAYAARYVAKNIVAGGLADRCEIQVSYAIGVAEPTSISVETFGTGKIDEVRIQQLIKEHFDLRPGKIIEELNLLR---SIYKATATYGHFGREEPEFTWE 372          
BLAST of CF834625 vs. ExPASy Swiss-Prot
Match: METK_COXB2 (S-adenosylmethionine synthetase OS=Coxiella burnetii (strain CbuG_Q212) GN=metK PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.145e-43
Identity = 89/152 (58.55%), Postives = 109/152 (71.71%), Query Frame = -1
Query:  199 FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 654
            F +NP+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRSGAY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GTGKI +  I +++KE+FD RPG I   L+L R     +  TA YGHFGR++P+FTWE
Sbjct:  224 FLVNPTGRFVIGGPVGDCGLTGRKIIVDTYGGMARHGGGCFSGKDPSKVDRSGAYAARYVAKNIVAGGLADRCEIQVSYAIGVAEPTSISVETFGTGKIDEVRIQQLIKEHFDLRPGKIIEELNLLR---SIYKATATYGHFGREEPEFTWE 372          
BLAST of CF834625 vs. ExPASy Swiss-Prot
Match: METK_COXB1 (S-adenosylmethionine synthetase OS=Coxiella burnetii (strain CbuK_Q154) GN=metK PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.145e-43
Identity = 89/152 (58.55%), Postives = 109/152 (71.71%), Query Frame = -1
Query:  199 FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 654
            F +NP+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRSGAY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GTGKI +  I +++KE+FD RPG I   L+L R     +  TA YGHFGR++P+FTWE
Sbjct:  224 FLVNPTGRFVIGGPVGDCGLTGRKIIVDTYGGMARHGGGCFSGKDPSKVDRSGAYAARYVAKNIVAGGLADRCEIQVSYAIGVAEPTSISVETFGTGKIDEVRIQQLIKEHFDLRPGKIIEELNLLR---SIYKATATYGHFGREEPEFTWE 372          
BLAST of CF834625 vs. ExPASy Swiss-Prot
Match: METK_CLOCE (S-adenosylmethionine synthetase OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=metK PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.145e-43
Identity = 86/152 (56.58%), Postives = 113/152 (74.34%), Query Frame = -1
Query:  199 FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 654
            + +NP+GRFV+GGP GD+GLTGRKII+DTY            GKDPTKVDRS AY  R  AK+IVASG+AR+C VQ++YAIGV +P+SV VD++GT  IP+++I ++V ++FD RP  I   L+L+R     + KTAAYGHFGRDD +F+WE
Sbjct:  234 YFINPTGRFVVGGPQGDSGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARYVAKNIVASGIARKCEVQLAYAIGVAKPVSVLVDTFGTAVIPEEKISELVNKHFDLRPAAIINKLNLRR---PIYRKTAAYGHFGRDDAEFSWE 382          
BLAST of CF834625 vs. ExPASy Swiss-Prot
Match: METK_BORPE (S-adenosylmethionine synthetase OS=Bordetella pertussis GN=metK PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.145e-43
Identity = 90/152 (59.21%), Postives = 111/152 (73.03%), Query Frame = -1
Query:  199 FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 654
            F +NP+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK++VA+GLAR+C VQVSYAIGV EP+++ V + GTG IPD++I K+V+E+FD RP  I   LDL R     + KTAAYGHFGR +P+F+WE
Sbjct:  227 FLVNPTGRFVIGGPQGDCGLTGRKIIVDTYGGACPHGGGAFSGKDPSKVDRSAAYAARYVAKNVVAAGLARQCQVQVSYAIGVAEPINITVYTEGTGVIPDEQIAKLVREHFDLRPKGIVNMLDLLR---PIYTKTAAYGHFGRSEPEFSWE 375          
The following BLAST results are available for this feature:
BLAST of CF834625 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_TERTT6.714e-4458.82S-adenosylmethionine synthetase OS=Teredinibacter ... [more]
METK_PELCD6.714e-4456.58S-adenosylmethionine synthetase OS=Pelobacter carb... [more]
METK_THIDA8.769e-4457.62S-adenosylmethionine synthetase OS=Thiobacillus de... [more]
METK_LARHH1.145e-4358.55S-adenosylmethionine synthetase OS=Laribacter hong... [more]
METK_COXBU1.145e-4358.55S-adenosylmethionine synthetase OS=Coxiella burnet... [more]
METK_COXBR1.145e-4358.55S-adenosylmethionine synthetase OS=Coxiella burnet... [more]
METK_COXB21.145e-4358.55S-adenosylmethionine synthetase OS=Coxiella burnet... [more]
METK_COXB11.145e-4358.55S-adenosylmethionine synthetase OS=Coxiella burnet... [more]
METK_CLOCE1.145e-4356.58S-adenosylmethionine synthetase OS=Clostridium cel... [more]
METK_BORPE1.145e-4359.21S-adenosylmethionine synthetase OS=Bordetella pert... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05N14_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05N14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834625 ID=CF834625; Name=CF834625; organism=Citrus sinensis; type=EST; length=654bp
CCTTGGATTGAGAATCCATTAAACATATTTATTAAAAAAAAAAAGGAAAA
GAAAAAGAAAGAAAGAAAGAAAACATTCATGTAACTGAAACAGAAGTAAA
AAAGAAAAGTAGACATATATAAGCACCAATGAGAGGCCAGCAGCTCATCC
TTGATTAGTTTAAGCTTGAAGTTTCTCCCACTTGAGTGGCTTAACAATCT
CCCAAGTGAAATCAGGATCATCTCTGCCAAAGTGCCCATAAGCGGCAGTC
TTCAAGAACCTGCCGTTGCCACCCCTCTTGAGATCAAGATTAATAGAAAT
CATCCCAGGCCTAAAATCAAAATTCTCCTTCACAATCTTCAAAATTTCCT
TGTCAGGGATCTTCCCAGTCCCATAACTATCAACAAAAACTGACAAAGGC
TCGGGCACACCAATAGCGTAAGAAACCTGAACAATGCATCTCCTGGCAAG
CCCGCTTGCCACAATACTCTTAGCAGCTTGCCTTACAATGTAAGCACCGC
TTCTATCAACCTTGGTAGGATCTTTCCCTGAGAAAGCCCCACCACCGTGT
GCCCCCCAGCCACCATAAGTATCAATAATAATCTTCCGGCCGGTGAGCCC
AGCATCACCGTGAGGGCCACCAATCACAAAACGGCCAGATGGGTTAAGAT
GGAA
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