CF834626

Overview
NameCF834626
Unique NameCF834626
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length548
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834626 vs. ExPASy Swiss-Prot
Match: METK4_CAEEL (Probable S-adenosylmethionine synthetase 4 OS=Caenorhabditis elegans GN=sams-4 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 1.936e-34
Identity = 71/116 (61.21%), Postives = 90/116 (77.59%), Query Frame = 1
Query:  199 FLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIG 546
            FLFTSESV+EGHPDK+CDQ+SDAVLDA LAQDP +KVACET TKT M+M+ GEIT+KA VDY+ +VR+  + IG+  +  G D   C VLV +EQQSP+IA GV  H+ K  +++G
Sbjct:    6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGV--HVDKDSDDVG 119          
BLAST of CF834626 vs. ExPASy Swiss-Prot
Match: METK3_CAEEL (Probable S-adenosylmethionine synthetase 3 OS=Caenorhabditis elegans GN=sams-3 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 1.936e-34
Identity = 71/116 (61.21%), Postives = 90/116 (77.59%), Query Frame = 1
Query:  199 FLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIG 546
            FLFTSESV+EGHPDK+CDQ+SDAVLDA LAQDP +KVACET TKT M+M+ GEIT+KA VDY+ +VR+  + IG+  +  G D   C VLV +EQQSP+IA GV  H+ K  +++G
Sbjct:    6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGV--HVDKDSDDVG 119          
BLAST of CF834626 vs. ExPASy Swiss-Prot
Match: METK_LACPL (S-adenosylmethionine synthetase OS=Lactobacillus plantarum GN=metK PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 2.529e-34
Identity = 68/113 (60.18%), Postives = 87/113 (76.99%), Query Frame = 1
Query:  193 ETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKR 531
            E  LFTSESV+EGHPDK+ DQ+SDA+LDA LAQDP ++VA ET   T +V+VFGE++TKA VD +K+VRDT +SIG+     G D D+C VLV++++QSPDIAQGV   L  R
Sbjct:    3 ERHLFTSESVSEGHPDKIADQISDAILDAMLAQDPQARVAVETSVTTGLVLVFGEVSTKAYVDIQKVVRDTIKSIGYVDGQYGFDGDNCAVLVSLDEQSPDIAQGVDDSLETR 115          
BLAST of CF834626 vs. ExPASy Swiss-Prot
Match: METK1_HUMAN (S-adenosylmethionine synthetase isoform type-1 OS=Homo sapiens GN=MAT1A PE=1 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 2.529e-34
Identity = 71/116 (61.21%), Postives = 89/116 (76.72%), Query Frame = 1
Query:  199 FLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIG 546
            F+FTSESV EGHPDK+CDQ+SDAVLDA L QDP++KVACET  KT MV++ GEIT+ A VDY+++VRDT + IG+  +  G D   C VLV +EQQSPDIAQ V  HL +  E++G
Sbjct:   18 FMFTSESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACETVCKTGMVLLCGEITSMAMVDYQRVVRDTIKHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQCV--HLDRNEEDVG 131          
BLAST of CF834626 vs. ExPASy Swiss-Prot
Match: METK5_CAEEL (Probable S-adenosylmethionine synthetase 5 OS=Caenorhabditis elegans GN=sams-5 PE=2 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 3.303e-34
Identity = 69/105 (65.71%), Postives = 84/105 (80.00%), Query Frame = 1
Query:  199 FLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVH 513
            FLFTSESV+EGHPDK+CDQ+SDAVLDA LAQDP +KVACET TKT M+M+ GEIT+KA VDY+ +VR+  + IG+  +  G D   C VLV +EQQSP+IA GVH
Sbjct:    6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVH 110          
BLAST of CF834626 vs. ExPASy Swiss-Prot
Match: METK1_RAT (S-adenosylmethionine synthetase isoform type-1 OS=Rattus norvegicus GN=Mat1a PE=1 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 3.303e-34
Identity = 70/116 (60.34%), Postives = 89/116 (76.72%), Query Frame = 1
Query:  199 FLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIG 546
            F+FTSESV EGHPDK+CDQ+SDAVLDA L QDP++KVACET  KT MV++ GEIT+ A +DY+++VRDT + IG+  +  G D   C VLV +EQQSPDIAQ V  HL +  E++G
Sbjct:   19 FMFTSESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACETVCKTGMVLLCGEITSMAMIDYQRVVRDTIKHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQCV--HLDRNEEDVG 132          
BLAST of CF834626 vs. ExPASy Swiss-Prot
Match: METK1_MOUSE (S-adenosylmethionine synthetase isoform type-1 OS=Mus musculus GN=Mat1a PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 3.303e-34
Identity = 71/116 (61.21%), Postives = 89/116 (76.72%), Query Frame = 1
Query:  199 FLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIG 546
            F+FTSESV EGHPDK+CDQ+SDAVLDA L QDP++KVACET  KT MV++ GEIT+ A VDY+++VRDT + IG+  +  G D   C VLV +EQQSPDIAQ V  HL +  E++G
Sbjct:   19 FMFTSESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACETVCKTGMVLLCGEITSVAMVDYQRVVRDTIKHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQCV--HLDRNEEDVG 132          
BLAST of CF834626 vs. ExPASy Swiss-Prot
Match: METK1_BOVIN (S-adenosylmethionine synthetase isoform type-1 OS=Bos taurus GN=MAT1A PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 9.610e-34
Identity = 70/116 (60.34%), Postives = 89/116 (76.72%), Query Frame = 1
Query:  199 FLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIG 546
            F+FTSESV EGHPDK+CDQ+SDAVLDA L QDP++KVACET  KT MV++ GEIT+ A VDY+++VR+T + IG+  +  G D   C VLV +EQQSPDIAQ V  HL +  E++G
Sbjct:   19 FMFTSESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACETVCKTGMVLLCGEITSMAMVDYQRVVRETIQHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQCV--HLDRNEEDVG 132          
BLAST of CF834626 vs. ExPASy Swiss-Prot
Match: METK_PROMH (S-adenosylmethionine synthetase OS=Proteus mirabilis (strain HI4320) GN=metK PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.255e-33
Identity = 72/107 (67.29%), Postives = 84/107 (78.50%), Query Frame = 1
Query:  190 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGV 510
            M T LFTSESV+EGHPDK+ DQ+SDAVLDA L QDP ++VACET  KT MVMV GEITTKA VD E+I R T R IG+TS+D+G DA+ C V+  I +QSPDI QGV
Sbjct:    1 MTTHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVMVGGEITTKAWVDIEEITRKTVREIGYTSSDMGFDANSCAVISAIGKQSPDINQGV 107          
BLAST of CF834626 vs. ExPASy Swiss-Prot
Match: METK_TREPS (S-adenosylmethionine synthetase OS=Treponema pallidum subsp. pallidum (strain SS14) GN=metK PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 2.141e-33
Identity = 70/109 (64.22%), Postives = 85/109 (77.98%), Query Frame = 1
Query:  190 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHG 516
            METF FTSESV+EGHPDKLCDQ+SDAVLDACL+QDP S VACET   T+++++ GEI+T+A+++  +I RD    IG+ SADVGLDA    VL     QSPDIAQGVHG
Sbjct:    1 METF-FTSESVSEGHPDKLCDQISDAVLDACLSQDPHSCVACETFASTSLILIGGEISTRAHINLTQIARDVAADIGYVSADVGLDAASMAVLDMTHHQSPDIAQGVHG 108          
The following BLAST results are available for this feature:
BLAST of CF834626 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK4_CAEEL1.936e-3461.21Probable S-adenosylmethionine synthetase 4 OS=Caen... [more]
METK3_CAEEL1.936e-3461.21Probable S-adenosylmethionine synthetase 3 OS=Caen... [more]
METK_LACPL2.529e-3460.18S-adenosylmethionine synthetase OS=Lactobacillus p... [more]
METK1_HUMAN2.529e-3461.21S-adenosylmethionine synthetase isoform type-1 OS=... [more]
METK5_CAEEL3.303e-3465.71Probable S-adenosylmethionine synthetase 5 OS=Caen... [more]
METK1_RAT3.303e-3460.34S-adenosylmethionine synthetase isoform type-1 OS=... [more]
METK1_MOUSE3.303e-3461.21S-adenosylmethionine synthetase isoform type-1 OS=... [more]
METK1_BOVIN9.610e-3460.34S-adenosylmethionine synthetase isoform type-1 OS=... [more]
METK_PROMH1.255e-3367.29S-adenosylmethionine synthetase OS=Proteus mirabil... [more]
METK_TREPS2.141e-3364.22S-adenosylmethionine synthetase OS=Treponema palli... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05N14_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05N14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834626 ID=CF834626; Name=CF834626; organism=Citrus sinensis; type=EST; length=548bp
GAAACTACAAATCCTTGCTGCCGTTTTACCTCCTCTCTCTCTTCTCTCAG
CGTCTGCATATCGTCTTTCTCTCGTTCTTCTGGGTACTTACCATTTTCGT
ATATCACCACCTTCAATTCCATTTGTACTCGCACCACGGCCTCCTGCAAA
GCGAAAGCTGCAGCTTCAGGTTAAATCAAATTAAAGAAAATGGAAACATT
TCTTTTCACATCAGAATCAGTGAACGAGGGTCACCCGGACAAGCTGTGTG
ACCAAGTTTCGGACGCAGTACTGGACGCGTGTTTGGCTCAGGATCCTGAC
AGCAAAGTTGCTTGTGAAACATGCACAAAGACCAACATGGTCATGGTTTT
TGGAGAAATTACAACCAAGGCCAATGTGGATTACGAGAAAATCGTGCGTG
ATACATGCAGATCGATTGGGTTCACATCGGCCGATGTGGGGCTTGATGCT
GATCACTGCAAAGTTCTTGTTAATATTGAGCAGCAGAGCCCTGACATTGC
TCAGGGTGTTCATGGGCATCTCACAAAGCGGCCTGAGGAGATTGGTGC
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